Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_L03
(816 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting... 34 0.11
L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting... 34 0.11
L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting... 34 0.11
U41274-5|AAA82461.2| 571|Caenorhabditis elegans Nematode astaci... 31 0.75
Z96047-6|CAB09416.1| 922|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z77134-3|CAB00874.1| 1603|Caenorhabditis elegans Hypothetical pr... 31 1.3
AF024614-1|AAB97161.1| 922|Caenorhabditis elegans ADAM 10 protein. 31 1.3
Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical pr... 29 4.0
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z70205-4|CAA94115.2| 528|Caenorhabditis elegans Hypothetical pr... 29 5.3
AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical ... 29 5.3
U41540-4|AAP46284.1| 266|Caenorhabditis elegans Hypothetical pr... 28 9.2
U41540-3|AAK39231.2| 357|Caenorhabditis elegans Hypothetical pr... 28 9.2
AF067948-3|AAO25984.1| 870|Caenorhabditis elegans Egl-27 relate... 28 9.2
AF067948-2|AAD34654.1| 870|Caenorhabditis elegans Egl-27 relate... 28 9.2
AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 relate... 28 9.2
>L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting
protein protein8, isoform a protein.
Length = 1132
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/64 (32%), Positives = 26/64 (40%)
Frame = +3
Query: 291 IGTKVMTCGAELLNCEGVSPWEDVSSVRLKLSGNSTSRCPWYARLGHHRVRPSRALRQVD 470
+ K T AELLN EG W D +L NS+ W + RP+ Q D
Sbjct: 424 VNNKEETIMAELLNYEGQVGWTDDEKTKLVTLINSSPTLDWVSISEGMNRRPNECKMQYD 483
Query: 471 AQGG 482
A G
Sbjct: 484 AMNG 487
>L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting
protein protein8, isoform b protein.
Length = 1780
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/64 (32%), Positives = 26/64 (40%)
Frame = +3
Query: 291 IGTKVMTCGAELLNCEGVSPWEDVSSVRLKLSGNSTSRCPWYARLGHHRVRPSRALRQVD 470
+ K T AELLN EG W D +L NS+ W + RP+ Q D
Sbjct: 424 VNNKEETIMAELLNYEGQVGWTDDEKTKLVTLINSSPTLDWVSISEGMNRRPNECKMQYD 483
Query: 471 AQGG 482
A G
Sbjct: 484 AMNG 487
>L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting
protein protein8, isoform c protein.
Length = 1697
Score = 34.3 bits (75), Expect = 0.11
Identities = 21/64 (32%), Positives = 26/64 (40%)
Frame = +3
Query: 291 IGTKVMTCGAELLNCEGVSPWEDVSSVRLKLSGNSTSRCPWYARLGHHRVRPSRALRQVD 470
+ K T AELLN EG W D +L NS+ W + RP+ Q D
Sbjct: 424 VNNKEETIMAELLNYEGQVGWTDDEKTKLVTLINSSPTLDWVSISEGMNRRPNECKMQYD 483
Query: 471 AQGG 482
A G
Sbjct: 484 AMNG 487
>U41274-5|AAA82461.2| 571|Caenorhabditis elegans Nematode astacin
protease protein15 protein.
Length = 571
Score = 31.5 bits (68), Expect = 0.75
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -3
Query: 340 PSQFNSSAPQVITLVPITILPLRTIRARSPSVVAFTEYQPSLTNSS 203
P++ + P V+T P+ LP IR+RSP+ T + + T S+
Sbjct: 476 PTEIPDNRPTVVTTRPLVTLPPAVIRSRSPAPPVSTTTKAAPTTST 521
>Z96047-6|CAB09416.1| 922|Caenorhabditis elegans Hypothetical
protein DY3.7 protein.
Length = 922
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = -2
Query: 347 RHPLAVQQLS---PTGHHFGSDHDFTAPHHPG 261
R P V QL+ GH+FGS HDF A PG
Sbjct: 414 RVPARVSQLTLAHEIGHNFGSPHDFPAECQPG 445
>Z77134-3|CAB00874.1| 1603|Caenorhabditis elegans Hypothetical
protein R09H10.5 protein.
Length = 1603
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = -3
Query: 337 SQFNSSAPQVITLVPITILPLRTIRARSPSVVAFTEYQPSLTNSSMLFVFG---TLFTST 167
S F +S + L +TI P + ++ QP++ S ++VF L T
Sbjct: 266 SAFTTSDAMIDYLHSVTIAPSSDDQPLLDAIANSQSTQPTMRPKSTVYVFADSENLLDPT 325
Query: 166 PSTKIPATHSTKVLEGT 116
PST + +T+ + V++ T
Sbjct: 326 PSTLLSSTNESMVIQQT 342
>AF024614-1|AAB97161.1| 922|Caenorhabditis elegans ADAM 10 protein.
Length = 922
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Frame = -2
Query: 347 RHPLAVQQLS---PTGHHFGSDHDFTAPHHPG 261
R P V QL+ GH+FGS HDF A PG
Sbjct: 414 RVPARVSQLTLAHEIGHNFGSPHDFPAECQPG 445
>Z80344-2|CAB02487.3| 608|Caenorhabditis elegans Hypothetical
protein F15D4.4 protein.
Length = 608
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/61 (26%), Positives = 26/61 (42%)
Frame = -3
Query: 361 TSSQGDTPSQFNSSAPQVITLVPITILPLRTIRARSPSVVAFTEYQPSLTNSSMLFVFGT 182
TS+ TPS S+ T + P+R +R +P+ T P T + +FG
Sbjct: 539 TSTSTSTPSTTTSTTSTSTTSSTSSSAPIRAVRTSTPTTRRTTTTTPRRTTTPRKTIFGR 598
Query: 181 L 179
+
Sbjct: 599 M 599
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = -2
Query: 515 PGHVDPEARHPPALRVHLPQSAGRANAVMPQPRVPGTATGRVP 387
P H D EA PP ++ G + P PRVP T R P
Sbjct: 113 PQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSP 155
>Z70205-4|CAA94115.2| 528|Caenorhabditis elegans Hypothetical
protein C11H1.5 protein.
Length = 528
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -3
Query: 256 SPSVVAFTEYQPSLTNSSMLFVFGTLFTSTP-STKIPATHSTKVLEGTSSFS 104
+P+V+ Y PS T SS+ F T TSTP ST T +T S++S
Sbjct: 316 APTVIK--PYPPSSTESSIDFTTATESTSTPTSTTSDITSTTTAPTSASTYS 365
>AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2b protein.
Length = 634
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = -3
Query: 322 SAPQVITLVPITILPLRTIRARSPSVVAFTEYQPSLTNSSMLFVFGTLFTSTPSTKIPAT 143
SA + + + P TI P T + + + T +P+ T S + T TST +T+ P T
Sbjct: 95 SAEEKVHVDPTTI-PSTTTSSTTTTTTTTTTEEPTTTTSPIATT--TTSTSTTTTETPTT 151
Query: 142 HSTKVLEGTSS 110
E T+S
Sbjct: 152 SEATTHEPTAS 162
>U41540-4|AAP46284.1| 266|Caenorhabditis elegans Hypothetical
protein F35H12.5b protein.
Length = 266
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 272 HHPGQEPVSGGLHRIPTVTH*QFYVVRFWDTFHFNSVNK 156
++PG E V+GGLH T Y+ +T +VN+
Sbjct: 16 NYPGSEFVTGGLHNSYTNQDRNSYMKSLMETLELKNVNR 54
>U41540-3|AAK39231.2| 357|Caenorhabditis elegans Hypothetical
protein F35H12.5a protein.
Length = 357
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -2
Query: 272 HHPGQEPVSGGLHRIPTVTH*QFYVVRFWDTFHFNSVNK 156
++PG E V+GGLH T Y+ +T +VN+
Sbjct: 105 NYPGSEFVTGGLHNSYTNQDRNSYMKSLMETLELKNVNR 143
>AF067948-3|AAO25984.1| 870|Caenorhabditis elegans Egl-27 related
protein 1, isoform d protein.
Length = 870
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -1
Query: 171 QLRQQKSRR-HTVPKS*KGHRLSPRSSSRPAFQRYTTLCR 55
Q++QQ+ R+ T P+ R +++PA YTT+CR
Sbjct: 732 QIQQQQQRQAQTTPQVVATPRKKTTPATKPAIVFYTTICR 771
>AF067948-2|AAD34654.1| 870|Caenorhabditis elegans Egl-27 related
protein 1, isoform b protein.
Length = 870
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -1
Query: 171 QLRQQKSRR-HTVPKS*KGHRLSPRSSSRPAFQRYTTLCR 55
Q++QQ+ R+ T P+ R +++PA YTT+CR
Sbjct: 732 QIQQQQQRQAQTTPQVVATPRKKTTPATKPAIVFYTTICR 771
>AF067948-1|AAD34653.1| 1022|Caenorhabditis elegans Egl-27 related
protein 1, isoform a protein.
Length = 1022
Score = 27.9 bits (59), Expect = 9.2
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -1
Query: 171 QLRQQKSRR-HTVPKS*KGHRLSPRSSSRPAFQRYTTLCR 55
Q++QQ+ R+ T P+ R +++PA YTT+CR
Sbjct: 732 QIQQQQQRQAQTTPQVVATPRKKTTPATKPAIVFYTTICR 771
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,632,922
Number of Sequences: 27780
Number of extensions: 341097
Number of successful extensions: 1116
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1116
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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