Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_K03
(792 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0328 - 17578190-17578240,17579307-17579379,17579715-175797... 33 0.20
10_08_0425 - 17806117-17806401,17806862-17806984,17807076-178072... 33 0.26
03_02_0401 - 8146758-8146912,8147151-8147235,8147502-8147567,814... 32 0.45
06_02_0345 + 14833838-14833997,14834095-14834552,14834633-148348... 31 1.0
03_01_0224 - 1771582-1771727,1771855-1771980,1772489-1772517,177... 31 1.0
04_03_0830 - 20125827-20125913,20126262-20126357,20126974-201270... 30 1.8
02_05_0500 - 29538409-29539283,29540306-29541641 30 1.8
08_02_1016 - 23606089-23607072 29 3.2
04_04_0891 + 29130494-29130904,29131043-29131102,29131203-291314... 29 3.2
03_05_0571 - 25713519-25714064,25714673-25714804 29 3.2
03_02_0688 + 10422337-10422873 29 3.2
02_03_0303 - 17506392-17506399,17507055-17507286,17507390-175074... 29 3.2
12_02_0918 - 24299620-24299748,24299890-24300037,24303105-243032... 29 4.2
09_03_0082 + 12166464-12166526,12167350-12167376,12167921-121679... 29 4.2
05_01_0269 + 2062467-2062475,2063252-2063303,2063668-2063743,206... 29 4.2
03_06_0527 - 34520419-34520536,34520695-34520953,34521041-34521095 29 4.2
01_05_0626 + 23797278-23797618,23797629-23798097 29 4.2
08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614 29 5.6
08_01_1000 + 10154024-10154147,10155500-10155761,10155839-101558... 29 5.6
03_01_0538 - 4038954-4039444,4040172-4040248,4040838-4040911,404... 29 5.6
02_02_0277 + 8489717-8491468,8491571-8491610,8491719-8491841,849... 29 5.6
10_08_0401 + 17629912-17630376 28 7.4
09_04_0593 - 18825741-18826702,18826994-18827875,18828687-188287... 28 7.4
06_03_0310 - 19453047-19453160,19453240-19453338,19453441-194535... 28 7.4
03_04_0187 - 18236041-18236643 28 7.4
02_02_0461 + 10534733-10536302,10536347-10536396,10536845-10538227 28 7.4
11_06_0453 + 23781803-23781814,23782700-23782781,23783334-23784160 28 9.8
11_06_0409 - 23217558-23218355,23218808-23219297,23219515-232195... 28 9.8
05_07_0191 - 28303642-28303952,28304044-28304149,28304926-28305654 28 9.8
03_02_0777 - 11116217-11116812,11117176-11117299 28 9.8
03_02_0706 + 10554672-10555778 28 9.8
03_01_0112 + 902459-902770,903275-903280 28 9.8
>12_02_0328 -
17578190-17578240,17579307-17579379,17579715-17579765,
17579863-17580332
Length = 214
Score = 33.5 bits (73), Expect = 0.20
Identities = 22/73 (30%), Positives = 31/73 (42%)
Frame = -2
Query: 356 GLQTRPQGSPAGIARPHPKVPARLDGPRGPSIGAAVTCLPRVQPSGLHRPIRDSAVLAII 177
GL GSP+ R P+ A + GPS AA LP ++ S LH S+ + +
Sbjct: 71 GLGPSAPGSPSSSRRKRPRTDAHHEAAAGPSTSAADPQLPELRLSVLHPGPGPSSSASAV 130
Query: 176 RRDCSXPGGAPAH 138
+ PAH
Sbjct: 131 GAVVAAAPPPPAH 143
>10_08_0425 -
17806117-17806401,17806862-17806984,17807076-17807222,
17807307-17807450,17808557-17808668,17808762-17808898,
17809016-17809156,17810921-17811004,17811275-17811742,
17811858-17811936,17812494-17812506,17813884-17814460,
17814502-17814774,17814899-17815045,17815354-17815413,
17816124-17816510
Length = 1058
Score = 33.1 bits (72), Expect = 0.26
Identities = 26/70 (37%), Positives = 36/70 (51%), Gaps = 8/70 (11%)
Frame = -2
Query: 368 PSVAGLQTRP----QGSPAGIARP-HPKVPARLDGPRG-PSIGAA-VTC-LPRVQPSGLH 213
PS G+Q +P P G +P P+ L GP G P +G++ VT LP +QP G+
Sbjct: 402 PSAHGVQPQPLWGYPPQPTGFQQPPFQSYPSGLLGPLGRPMVGSSSVTAYLPSIQPPGVS 461
Query: 212 RPIRDSAVLA 183
RDS L+
Sbjct: 462 TTDRDSKELS 471
>03_02_0401 -
8146758-8146912,8147151-8147235,8147502-8147567,
8147744-8147802,8147911-8148013,8148227-8148358,
8148447-8148527,8148729-8148821,8148978-8149061,
8149242-8149300,8149405-8149481,8149639-8149789,
8150302-8150437
Length = 426
Score = 32.3 bits (70), Expect = 0.45
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2
Query: 275 RGPSIGAAVTCLPRVQPSGLHRPIRDSAVLAIIRRDCSXP 156
RG SIG VTC+ R P G+ P+ D + + S P
Sbjct: 254 RGDSIGGVVTCIARNVPRGIGSPVFDKLEAELAKAMLSLP 293
>06_02_0345 +
14833838-14833997,14834095-14834552,14834633-14834870,
14834974-14835431,14836554-14836955
Length = 571
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -3
Query: 181 SSGGIAPXLVAPRPTCFRMTLPPEGAVRCTPXRGDYSPP 65
SSG +P + P P + LPPE VR +P D+ PP
Sbjct: 459 SSGSHSPERLTPSPVMREVDLPPEFCVRGSP-TPDWPPP 496
>03_01_0224 -
1771582-1771727,1771855-1771980,1772489-1772517,
1772689-1772747,1772816-1772929,1773030-1773238,
1773347-1774087,1775678-1776238,1776295-1776419,
1778187-1778317,1779020-1779178,1779471-1779728,
1780140-1780164,1780531-1780592,1780944-1781003,
1781112-1781219,1781703-1781838,1781880-1781929,
1782024-1782096,1782209-1782345,1782441-1782527,
1782624-1782721,1783259-1783369,1783685-1783769,
1783880-1783969
Length = 1259
Score = 31.1 bits (67), Expect = 1.0
Identities = 24/81 (29%), Positives = 29/81 (35%)
Frame = -2
Query: 710 LHPSTDPAQRATWPRCERGGRFPRHATAASPSSERHPYWSQTGWALRLWTPKPPVGRKGS 531
L P T P +R RGG HAT SP+S H + G A + V G
Sbjct: 657 LLPPTSPCRRDATRDTGRGGGRGTHATLLSPASHSHRTRRRIGKAQPRVGSRARVMSGGD 716
Query: 530 FAELAGPTRRILTHRICAGGT 468
E A H C G+
Sbjct: 717 GEEAAAAAAAATLHIRCTNGS 737
>04_03_0830 -
20125827-20125913,20126262-20126357,20126974-20127053,
20127124-20127220,20127457-20127544,20128491-20128576,
20129358-20130530
Length = 568
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/77 (29%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Frame = -2
Query: 635 ATAASPSSERHPYWSQTGWALRLWTPK---PPVGRKGSFAELAGPTRRILTHRICAGGTP 465
ATAA+PS+ H S WA L +P P S + +A P R + G
Sbjct: 331 ATAAAPSARTHGARSHRSWAWALASPMRALRPTSSSSSKSIMAAPHNR---GGVSGNGGM 387
Query: 464 HSRVITCPL*LQREARG 414
+ CP Q +A G
Sbjct: 388 AMAALACPQLAQAQAHG 404
>02_05_0500 - 29538409-29539283,29540306-29541641
Length = 736
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = -3
Query: 571 ACGHPNPLLVEKVRSQN-WQVQPGAS*PTGSAPAEPRTV-GLSPVLSDSSGRPEASGLFP 398
AC HPNP E+ R+Q Q+ GA+ P P++P + PV D E S
Sbjct: 644 ACSHPNP--GERPRTQTILQILTGAAPPPHVPPSKPAFMWPAMPVALDGDDDDETSRSST 701
Query: 397 FMNFFATEY 371
MN ++ Y
Sbjct: 702 VMNSSSSYY 710
>08_02_1016 - 23606089-23607072
Length = 327
Score = 29.5 bits (63), Expect = 3.2
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = -3
Query: 580 GLYACGHPNPLLVEKVRSQNWQVQPGAS*P-TGSAPAEPRTVGLSPVLSDSSG-RPEASG 407
GL A NP+ V K R N +V PGA P +G+ +TV V++ G P S
Sbjct: 244 GLVAAAASNPVDVVKTRVMNMKVAPGAPPPYSGAIDCALKTVRSEGVMALYKGFIPTVSR 303
Query: 406 LFPF 395
PF
Sbjct: 304 QGPF 307
>04_04_0891 +
29130494-29130904,29131043-29131102,29131203-29131409,
29131520-29131645,29131767-29131823,29131946-29132014
Length = 309
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/51 (31%), Positives = 22/51 (43%)
Frame = -3
Query: 595 GLKQGGLYACGHPNPLLVEKVRSQNWQVQPGAS*PTGSAPAEPRTVGLSPV 443
GL G + + PLL VR ++W G + P PR+ GL V
Sbjct: 4 GLSGGAMTSFAVKKPLLAAAVRRRSWPPPSGRALPFSPLTRTPRSRGLGTV 54
>03_05_0571 - 25713519-25714064,25714673-25714804
Length = 225
Score = 29.5 bits (63), Expect = 3.2
Identities = 16/50 (32%), Positives = 19/50 (38%)
Frame = -3
Query: 187 SPSSGGIAPXLVAPRPTCFRMTLPPEGAVRCTPXRGDYSPPLAPRPTYCP 38
SPS+ G + A P CF L RC PP +P P P
Sbjct: 165 SPSAAGGGGMVAAACPRCFLYVLISRSDPRCPRCESHVPPPPSPAPKKKP 214
>03_02_0688 + 10422337-10422873
Length = 178
Score = 29.5 bits (63), Expect = 3.2
Identities = 24/78 (30%), Positives = 31/78 (39%)
Frame = -3
Query: 346 PDHRVRPQVSQGPTRRYLLGLTVLAVRPSGLLSRVYHVYSHPGYTVP*GTVRCSPSSGGI 167
P H + SQG RR +L V P L R + P +VP ++ PSS
Sbjct: 47 PSHVLSRPCSQGGARR------ILIVSPESELKRGCFYFLVPASSVPEKKIKRKPSSSSA 100
Query: 166 APXLVAPRPTCFRMTLPP 113
P PRP + PP
Sbjct: 101 PP---RPRPQQKKAPRPP 115
>02_03_0303 -
17506392-17506399,17507055-17507286,17507390-17507461,
17507561-17508586,17509194-17509448,17510483-17510962
Length = 690
Score = 29.5 bits (63), Expect = 3.2
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = -3
Query: 730 GSAPKEVSTRALTPLSEQXGLGASEEVDFLAMPPPLHHHRSGIRIGLKQGGL---YACGH 560
G+A +EV + + + G+G S A PPP RS + L+QGGL YA
Sbjct: 76 GAAVEEVELLRVVEANARDGMGGSRGESSSAPPPP---PRSRV---LRQGGLEEEYAKNS 129
Query: 559 PNPL 548
P+PL
Sbjct: 130 PSPL 133
>12_02_0918 -
24299620-24299748,24299890-24300037,24303105-24303280,
24305870-24305917,24306005-24306116,24306209-24306468
Length = 290
Score = 29.1 bits (62), Expect = 4.2
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Frame = -1
Query: 525 RTGRSNQAHPDPQDLRRRNPAQSGYHLSSLTPAGGQRLQVYFLL*TFLQQSITLCGR-AA 349
++GR + D DL R +P ++ H ++ + +R+Q F + GR A
Sbjct: 51 QSGRRQKWRIDTSDLARASPLETNPHRTATSTPQNRRIQYVFGRSCLRSRLAATAGRWRA 110
Query: 348 NPT----TGFARR---YRKAPPEGTC 292
+P+ G+ARR +R + P G C
Sbjct: 111 HPSLHVLVGWARRMIGFRVSTPVGGC 136
>09_03_0082 +
12166464-12166526,12167350-12167376,12167921-12167993,
12168517-12168773
Length = 139
Score = 29.1 bits (62), Expect = 4.2
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = -1
Query: 282 RSSRSVHRGCCHVFTTCTAIRVTPSHKGQCGA 187
RSS S C H FTT T V PSH G G+
Sbjct: 74 RSSYSSSSPCPHAFTTST---VAPSHPGSSGS 102
>05_01_0269 +
2062467-2062475,2063252-2063303,2063668-2063743,
2064156-2064288,2064400-2064578,2065228-2065495,
2066250-2066342,2066667-2066776,2066887-2066905,
2066985-2067170
Length = 374
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -2
Query: 701 STDPAQRATWPRCERGGRFPRHATAASPSS-ERHPYW 594
ST A RA W +C R H A P S R+P W
Sbjct: 110 STAAAARARWKKCVRHCLLREHTPATRPKSIFRNPVW 146
>03_06_0527 - 34520419-34520536,34520695-34520953,34521041-34521095
Length = 143
Score = 29.1 bits (62), Expect = 4.2
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = -2
Query: 740 SKPWKRAKRGLHPSTDPAQRATWPRCERGGRFPRHATAASPS-SERHPYWSQTGWALRLW 564
S P R+K H S+ R P G FP AA+ S S+ H +W+++ WA
Sbjct: 60 SAPVSRSKA--HASSPRGGRID-PATRVEGFFPHDDAAAAESPSKSHDWWTRSNWAFLNE 116
Query: 563 TPKPPVGRK 537
P+ + K
Sbjct: 117 PPQEEIAGK 125
>01_05_0626 + 23797278-23797618,23797629-23798097
Length = 269
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -3
Query: 439 SDSSGRPEASGLFPF-MNFFATEYNPLWPGCKPDHRVRPQVSQGPT 305
+D++G+ E S ++ +E +P+W GC + RV+ V T
Sbjct: 88 ADATGQEEESSPISLDLHLICSEEDPIWSGCHDESRVQATVFSNGT 133
>08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614
Length = 248
Score = 28.7 bits (61), Expect = 5.6
Identities = 31/112 (27%), Positives = 40/112 (35%), Gaps = 2/112 (1%)
Frame = -2
Query: 776 PPPLSLNRFQSXSKPWKRAKRGLHPSTDPAQRATWPRCERGGRF--PRHATAASPSSERH 603
P P R + RA + PA+ + P + GR PR A P +
Sbjct: 115 PSPRQPGRLPAHLTVASRAAQPASRLRAPARASPSPDAQTPGRRSRPRRCLAGRPQATAG 174
Query: 602 PYWSQTGWALRLWTPKPPVGRKGSFAELAGPTRRILTHRICAGGTPHSRVIT 447
++ A RL T PP R A P R R+ A G P S IT
Sbjct: 175 SPAARLA-ARRLRTSPPPRLRTSRLAGAVAPRARRPPARLAAFGLPSSSNIT 225
>08_01_1000 +
10154024-10154147,10155500-10155761,10155839-10155885,
10155967-10155998,10156079-10156146,10156214-10156605,
10156811-10157009,10157494-10157636,10157722-10158366,
10158493-10158551,10158725-10158823
Length = 689
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/51 (29%), Positives = 22/51 (43%)
Frame = -2
Query: 350 QTRPQGSPAGIARPHPKVPARLDGPRGPSIGAAVTCLPRVQPSGLHRPIRD 198
Q PQ +P P++ + G G S + +PR P + PIRD
Sbjct: 515 QINPQSPRNADGQPEPELNPKSPGEAGTSHFDDMPEIPRFSPQNIPSPIRD 565
>03_01_0538 -
4038954-4039444,4040172-4040248,4040838-4040911,
4041115-4041203,4041481-4041563,4041645-4042233,
4042915-4043101
Length = 529
Score = 28.7 bits (61), Expect = 5.6
Identities = 24/80 (30%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Frame = -3
Query: 238 HVYSHPGYTVP*GTVRCSPSSG--GIAPXLVAPRPTCFRMTLPPEGAVRCTPXRGDYSPP 65
+ Y H G V +P +G G+ P P P + LPP G P P
Sbjct: 120 YFYGHGGSGVGIDINMNAPPAGCTGVLPDHRPPPPQQDHIFLPPHGQYFLGPPN-----P 174
Query: 64 LAPRPTYCPVAF*GGTYEGS 5
+AP P Y GG +GS
Sbjct: 175 MAPAPMYNAGGGGGGVVDGS 194
>02_02_0277 +
8489717-8491468,8491571-8491610,8491719-8491841,
8491959-8492014
Length = 656
Score = 28.7 bits (61), Expect = 5.6
Identities = 28/90 (31%), Positives = 31/90 (34%), Gaps = 4/90 (4%)
Frame = -2
Query: 359 AGLQTRPQGSPAGIARPHPKVPARLDGPRGPSIGAAVTCLPRVQPSGLHRPIRDSA---- 192
AG + RP SPA A + P I PR P P S+
Sbjct: 10 AGGEERPAASPAAPAVAEAVEEGPVTSRWAPEIRVYRRKYPRKNPKPPPNPSPSSSPLAQ 69
Query: 191 VLAIIRRDCSXPGGAPAHLFPDDTAPRGSS 102
LA IRR P PA PD A SS
Sbjct: 70 TLASIRRSIRRPEDGPAAPRPDPPAAPASS 99
>10_08_0401 + 17629912-17630376
Length = 154
Score = 28.3 bits (60), Expect = 7.4
Identities = 25/70 (35%), Positives = 31/70 (44%)
Frame = -2
Query: 308 HPKVPARLDGPRGPSIGAAVTCLPRVQPSGLHRPIRDSAVLAIIRRDCSXPGGAPAHLFP 129
HP AR RG + GAA PR P G +R+SA ++ R D G APA
Sbjct: 47 HPSERAR----RGHAAGAAPALSPRAAPRG---QLRESAA-SVARADQEEGGVAPARKVG 98
Query: 128 DDTAPRGSSA 99
A G+ A
Sbjct: 99 RGCARAGTVA 108
>09_04_0593 -
18825741-18826702,18826994-18827875,18828687-18828775,
18828942-18829080,18829405-18829531,18829629-18829838
Length = 802
Score = 28.3 bits (60), Expect = 7.4
Identities = 28/80 (35%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = -2
Query: 311 PHPKVPARLDGPRGPSIGAAVTCLP-RVQPSGLHRPIRDSAVLAIIRRDCSXPGGAPAHL 135
P PAR PR P + A T LP V G + D+A L+ R C GG + L
Sbjct: 286 PSSSSPARR--PRHP-VSDAATALPFTVAALGSDADLLDAAFLS---RLCGDAGGRVSVL 339
Query: 134 FPDDTAPRG-SSAVHAXQGR 78
PD P G A+ + GR
Sbjct: 340 VPDVPTPAGLVEALGSGSGR 359
>06_03_0310 -
19453047-19453160,19453240-19453338,19453441-19453513,
19453598-19453708,19453795-19453956,19454064-19454340,
19454542-19455160,19455256-19455471
Length = 556
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = -3
Query: 739 PNPGSAPKEVSTRALTPLSEQXGLGASEEVDFLAMPPPLH 620
P P AP RA TP Q L A + PPP H
Sbjct: 181 PTPPQAPAPTPPRAPTPTPPQAPLPAPSKSRASQAPPPAH 220
>03_04_0187 - 18236041-18236643
Length = 200
Score = 28.3 bits (60), Expect = 7.4
Identities = 23/93 (24%), Positives = 33/93 (35%), Gaps = 2/93 (2%)
Frame = +3
Query: 288 PSRYLRVGPCDTCGRTLWSGLQPGHRGLYSVAKKFIKGNRPEASGLPLESERTGDNPTVR 467
P R L C CG+ P H+ L K P + LP+ P+
Sbjct: 41 PERELLRFRCSVCGKAF-----PSHQALGGHKASHRK---PPTAALPMHVIDAPPPPSAE 92
Query: 468 GSAGADPVGQDAPGWT--CQFCERTFSTNRGFG 560
+A + + G C C RTF+T + G
Sbjct: 93 DTASSSTTTTTSGGGRHRCSVCHRTFATGQALG 125
>02_02_0461 + 10534733-10536302,10536347-10536396,10536845-10538227
Length = 1000
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 366 GLYSVAKKFIKGNRPEASGLPLESERTG-DN 455
GL+ V + F K RPE + P E+E G DN
Sbjct: 148 GLHEVTQHFDKSFRPETTSFPTETEMFGRDN 178
>11_06_0453 + 23781803-23781814,23782700-23782781,23783334-23784160
Length = 306
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -3
Query: 148 PRPTCFRMTLPPEGAVRCTPXRGDYSPPLAPRPTY 44
P+PT M PP V CTP PP RP Y
Sbjct: 178 PQPTTMEMPPPP---VTCTPVVEKPRPPPCARPFY 209
>11_06_0409 -
23217558-23218355,23218808-23219297,23219515-23219591,
23219624-23219863,23220338-23220481,23220522-23220582,
23220875-23220934,23221097-23221192,23221306-23221398,
23221494-23221585
Length = 716
Score = 27.9 bits (59), Expect = 9.8
Identities = 25/103 (24%), Positives = 39/103 (37%), Gaps = 1/103 (0%)
Frame = -3
Query: 592 LKQGGLY-ACGHPNPLLVEKVRSQNWQVQPGAS*PTGSAPAEPRTVGLSPVLSDSSGRPE 416
L+ GLY GH NP + G + + + + P + SS P
Sbjct: 10 LQPAGLYRGVGHQNPAPQPARSRTTTTIHGGGYQKSTGVRSHQKQAVVQPTVRPSSWLPG 69
Query: 415 ASGLFPFMNFFATEYNPLWPGCKPDHRVRPQVSQGPTRRYLLG 287
+ P F T+ P KP R RP + QG ++ ++G
Sbjct: 70 GTYRKPVT--FKTQKPPKPAIAKPVVRPRPSIQQGGYQKNVIG 110
>05_07_0191 - 28303642-28303952,28304044-28304149,28304926-28305654
Length = 381
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -2
Query: 293 ARLDGPRGPSIGAAVTCLPRVQPSGLHRPIRDSAVLAIIRR 171
AR+DG S+ AA + +PSG R + +AV+A++ R
Sbjct: 175 ARMDGEVVGSVAAAAPRVDGTEPSGF-RTVGSTAVVAVVGR 214
>03_02_0777 - 11116217-11116812,11117176-11117299
Length = 239
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -2
Query: 728 KRAKRGLHPSTDPAQRATWPRCERGGRFPRHATAASPSSE 609
+ A+RG A P C +GGR PR A SP +
Sbjct: 37 EEAERGGRSPGREAATLPGPDCYQGGRSPRREAATSPGPD 76
>03_02_0706 + 10554672-10555778
Length = 368
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/40 (45%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
Frame = +1
Query: 430 WSQRGQVITRL-CGVP-PAQILWVRMRLVGPASSANEPFR 543
WS G+ RL G P P LW L GPA SA E R
Sbjct: 329 WSGSGKPWARLGAGRPCPLDALWAPFDLYGPADSAAEGSR 368
>03_01_0112 + 902459-902770,903275-903280
Length = 105
Score = 27.9 bits (59), Expect = 9.8
Identities = 17/45 (37%), Positives = 20/45 (44%)
Frame = +1
Query: 223 DGCTRGKHVTAAPMDGPRGPSSLAGTFGWGLAIPAGEPCGRVCSP 357
+G +G VT AP G SLAG + PA PCG P
Sbjct: 13 EGVAKGSVVTPAPATALLG--SLAGWMSRAVEPPAPRPCGTEGGP 55
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,331,654
Number of Sequences: 37544
Number of extensions: 833385
Number of successful extensions: 2961
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 2733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2956
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2138915688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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