Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_FL5_K03
         (792 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   2.5  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   2.5  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    23   4.3  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   5.7  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   7.5  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    22   7.5  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   7.5  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   9.9  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   9.9  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -3

Query: 646 FLAMPPPLHHHRSGIRIGLK 587
           +LA+  PL H+RSG++  ++
Sbjct: 133 YLAIYHPLRHYRSGLKRAIR 152


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = -3

Query: 307 TRRYLLGLTV--LAVRPSGLLSRVYHVYSHPGY 215
           T  YL  L V  L +  SGL   +Y+++SH  Y
Sbjct: 88  TNYYLFSLAVSDLLLLISGLPPEIYYIWSHFPY 120


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +1

Query: 364 EGYTLLQKSS*KEIDLKPLASRWSQRGQVITRLCGV 471
           E    LQ S+ KEI   P    WS + + I  + G+
Sbjct: 53  EAIQCLQSSAFKEIKTLPDRGMWSSKIEFILSVVGL 88


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/43 (20%), Positives = 22/43 (51%)
 Frame = +1

Query: 370 YTLLQKSS*KEIDLKPLASRWSQRGQVITRLCGVPPAQILWVR 498
           Y++   S  K +++  +++R     ++   + G PP  ++W R
Sbjct: 304 YSVSVVSLDKSLEVNHISARVGDNVEIKCDVTGTPPPPLVWRR 346


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = -3

Query: 181  SSGGIAPXLVAPRPTCF 131
            SSG  A    AP P CF
Sbjct: 1042 SSGAAAMASAAPMPACF 1058


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 379 LQKSS*KEIDLKPLASRWSQRGQVITRLCGV 471
           LQ S+ KEI   P    WS + + I  + G+
Sbjct: 5   LQSSAFKEIKTLPDRGMWSSKIEFILSVVGL 35


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 613 RSGIRIGLKQGGLYA 569
           RSG  IGL++G L+A
Sbjct: 762 RSGYGIGLQKGSLWA 776


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 777 PSAVVP*SFPEXFQTLEARQKRSPP 703
           PS+  P   P   Q+ +A Q+ SPP
Sbjct: 16  PSSGAPGPQPSPHQSPQAPQRGSPP 40


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +2

Query: 98  PHCSLWGQCHPETGGPGRHQGGSN 169
           PH     Q HP  G    HQ G++
Sbjct: 318 PHQHHPSQYHPHRGSSPHHQHGNH 341


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 255,673
Number of Sequences: 438
Number of extensions: 6443
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25003662
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)