Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_J19
(780 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23C11.05 |||inorganic pyrophosphatase |Schizosaccharomyces p... 221 7e-59
SPAC3A12.02 |||inorganic pyrophosphatase|Schizosaccharomyces pom... 202 4e-53
SPAC15A10.13 |ppk3||serine/threonine protein kinase Ppk3|Schizos... 27 2.3
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 27 2.3
SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces po... 27 2.3
SPCC63.02c |aah3||alpha-amylase homolog Aah3|Schizosaccharomyces... 26 5.3
SPAC17A2.09c |csx1||RNA-binding protein Csx1|Schizosaccharomyces... 26 5.3
SPAC1D4.10 |||tRNA endonuclease|Schizosaccharomyces pombe|chr 1|... 26 5.3
SPCC18B5.08c |||isoleucine-tRNA ligase|Schizosaccharomyces pombe... 26 7.0
SPBC1711.11 |||autophagy associated protein |Schizosaccharomyces... 25 9.2
SPAC19D5.06c |din1||Dhp1p-interacting protein Din1|Schizosacchar... 25 9.2
>SPAC23C11.05 |||inorganic pyrophosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 289
Score = 221 bits (541), Expect = 7e-59
Identities = 101/178 (56%), Positives = 126/178 (70%)
Frame = +2
Query: 116 YIVEERGSPYTPDYRVFFKDEGGPISPMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISL 295
Y E G+ T DY+V+ + G PIS HDIPL+A+ + ++NMVVE+PRWT AK+EI+
Sbjct: 4 YTTREVGALNTLDYQVYVEKNGTPISSWHDIPLYANAEKTILNMVVEIPRWTQAKLEITK 63
Query: 296 GEALNPIKQDVKKGNLRFVNNVFPHRGYIWNYDALPQTWENPNHVDPDTGARGDNDPVDV 475
LNPIKQD KKG LRFV N FPH GYIWNY A PQT+E+PN V P+T A+GD+DP+DV
Sbjct: 64 EATLNPIKQDTKKGKLRFVRNCFPHHGYIWNYGAFPQTYEDPNVVHPETKAKGDSDPLDV 123
Query: 476 IEIGERVXSRGDVYPVKILGTLALIDEGETDWKLIAIDSRDPERGXVNDVQXVEALFP 649
EIGE G V VK+LG +AL+DEGETDWK+I ID DP +ND++ VE P
Sbjct: 124 CEIGEARGYTGQVKQVKVLGVMALLDEGETDWKVIVIDVNDPLAPKLNDIEDVERHMP 181
>SPAC3A12.02 |||inorganic pyrophosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 202 bits (493), Expect = 4e-53
Identities = 96/194 (49%), Positives = 123/194 (63%)
Frame = +2
Query: 89 ATLKTQVRMYIVEERGSPYTPDYRVFFKDEGGPISPMHDIPLWADKAQRLVNMVVEVPRW 268
A+L + + + G TPD+RV+ PIS HD+PL +DK NMV E+PRW
Sbjct: 2 ASLAKNILQFRSKITGKLNTPDFRVYCYKNNKPISFFHDVPLTSDKDT--FNMVTEIPRW 59
Query: 269 TNAKMEISLGEALNPIKQDVKKGNLRFVNNVFPHRGYIWNYDALPQTWENPNHVDPDTGA 448
T AK EISL +PIKQD+K G LR+V N FP+ G+IWNY ALPQTWE+PN +D T
Sbjct: 60 TQAKCEISLTSPFHPIKQDLKNGKLRYVANSFPYHGFIWNYGALPQTWEDPNVIDSRTKM 119
Query: 449 RGDNDPVDVIEIGERVXSRGDVYPVKILGTLALIDEGETDWKLIAIDSRDPERGXVNDVQ 628
+GD DP+DV EIG + G + VK+LG L LID+GETDWK++AID DP +ND+
Sbjct: 120 KGDGDPLDVCEIGGSIGYIGQIKQVKVLGALGLIDQGETDWKILAIDINDPRAKLLNDIS 179
Query: 629 XVEALFPXPPPXHR 670
V+ L P P R
Sbjct: 180 DVQNLMPRLLPCTR 193
>SPAC15A10.13 |ppk3||serine/threonine protein kinase
Ppk3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 637
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +2
Query: 26 IARRLCAVKEPTRVTCSINSTATLKTQVRMYIVEERGSPYTPD 154
+A R C + R C I +T K+ +YI E P T +
Sbjct: 64 LADRACETMKTLRHPCIIKYLSTYKSSTHLYIATETVRPVTTE 106
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 27.5 bits (58), Expect = 2.3
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -1
Query: 576 SFQSVSPSSMRASVPRIFTGYTSPRLXTRSPISMTSTGSLSPLAPVS 436
SF P VPR + + P L +RS + + SLSP+A V+
Sbjct: 86 SFTHSQPQIQAQPVPRRPSLFDRPNLVSRSSSRLGDSPSLSPVAQVA 132
>SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 27.5 bits (58), Expect = 2.3
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +2
Query: 170 KDEGGPISPMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEALNPIKQDVKKGNLRF 349
+DEG + +H + D AQ +VN E +++ +AL P K L+
Sbjct: 177 QDEGFIVISIHPGAVRTDSAQEIVNQHAEK---KPEILDLFAKQALTPEKS--ASDMLKV 231
Query: 350 VNNVFP-HRGYIWNYD 394
V+N+ P + G +NYD
Sbjct: 232 VDNLKPENNGLFYNYD 247
>SPCC63.02c |aah3||alpha-amylase homolog Aah3|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 564
Score = 26.2 bits (55), Expect = 5.3
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = -1
Query: 570 QSVSPSSMRASVPRIFTGYTSPRLXTRSPISMTSTGSLSPLAPVS 436
++V PS+ + ++T Y SP R S T TGS+ ++ S
Sbjct: 499 RTVMPSTSATATTTVYTSYYSPSYSAR---SFTGTGSIFTISSSS 540
>SPAC17A2.09c |csx1||RNA-binding protein Csx1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 26.2 bits (55), Expect = 5.3
Identities = 20/73 (27%), Positives = 35/73 (47%)
Frame = -1
Query: 648 GNNASTXCTSFTXPRSGSRESIAISFQSVSPSSMRASVPRIFTGYTSPRLXTRSPISMTS 469
G N+ + +S + +S + QS+ P+S+ +S+ G S T SP ++
Sbjct: 406 GANSGSSNSSGSSLKSAPVSPRTAAAQSLLPNSVVSSI----NGMNSVNFSTISPPPLSR 461
Query: 468 TGSLSPLAPVSGS 430
+ S+SP SGS
Sbjct: 462 SASISPTLSGSGS 474
>SPAC1D4.10 |||tRNA endonuclease|Schizosaccharomyces pombe|chr
1|||Manual
Length = 809
Score = 26.2 bits (55), Expect = 5.3
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +2
Query: 131 RGSPYTPDY--RVFFKDEGGPISPMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEA 304
RG P T + V+ K+ GP P + + ++++V+E +WTNA + + +
Sbjct: 301 RGEPVTLENGKTVYPKEVIGPSIPGSSFFIIHCPNELVIDLVIENHKWTNAPKPVCVIHS 360
Query: 305 LNP 313
+ P
Sbjct: 361 VTP 363
>SPCC18B5.08c |||isoleucine-tRNA ligase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 25.8 bits (54), Expect = 7.0
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 633 WRRCSPXLLRATVXWFRAL 689
WR P +LRAT WF +L
Sbjct: 428 WRTHKPLILRATPQWFISL 446
>SPBC1711.11 |||autophagy associated protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 390
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 525 FTGYTSPRLXTRSPISMTSTGSLSPL 448
+ GY P L + +S S GSLSP+
Sbjct: 59 YNGYAIPPLPRKYTVSSFSGGSLSPI 84
>SPAC19D5.06c |din1||Dhp1p-interacting protein
Din1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 352
Score = 25.4 bits (53), Expect = 9.2
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +2
Query: 167 FKDEGGPISPMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEALNPIKQDVKK 334
F+D+ G + M + L+ + +++ + WT ++ + L AL IKQ VK+
Sbjct: 276 FRDDNGILIEMKE--LFTHQIPKMLRPYFKPNDWTPNRLLVVLEHALEWIKQTVKQ 329
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,609,332
Number of Sequences: 5004
Number of extensions: 53129
Number of successful extensions: 165
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 163
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 377352472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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