Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_I24
(731 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 170 1e-42
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 40 0.001
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 40 0.001
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 40 0.001
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 39 0.004
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 39 0.004
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.022
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.022
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.022
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 36 0.030
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 36 0.039
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 36 0.039
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 36 0.039
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 36 0.039
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 35 0.068
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 33 0.21
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 32 0.48
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 32 0.48
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 31 0.64
Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 1.9
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 30 1.9
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 29 3.4
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 29 3.4
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 29 3.4
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 29 3.4
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 3.4
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 3.4
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 4.5
U28991-12|AAA68386.2| 550|Caenorhabditis elegans Hypothetical p... 28 5.9
AL110482-8|CAE17990.1| 193|Caenorhabditis elegans Hypothetical ... 28 5.9
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 28 7.8
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 28 7.8
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 170 bits (413), Expect = 1e-42
Identities = 78/118 (66%), Positives = 95/118 (80%)
Frame = +2
Query: 65 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLCRTWEKLVL 244
MSGG AL EEDV K+LA HLG+ N+NFQM+ YVYKRR DG ++IN+ +TWEKL+L
Sbjct: 1 MSGGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLL 60
Query: 245 AARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFRE 418
AARA+ A+ENPADV V+S+RP+ QRA+LKFAAHTGAT I GRF+PG TNQIQ F+E
Sbjct: 61 AARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKE 118
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/81 (34%), Positives = 28/81 (34%), Gaps = 3/81 (3%)
Frame = -1
Query: 722 PPP--PXXXXXXPPPPXXGGGXGXXXXPPXPXXXGGGXXXXXXXXXXPPPXXXXXGGXXX 549
PPP P PPPP GG PP P GG PPP GG
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG----LPPISGGPPPPPPPPGGCPP 770
Query: 548 XXGKXXP-XFXGVFXPPPXPG 489
P F G PPP PG
Sbjct: 771 PPPPPPPGGFKGGPPPPPPPG 791
Score = 34.7 bits (76), Expect = 0.068
Identities = 32/120 (26%), Positives = 36/120 (30%), Gaps = 7/120 (5%)
Frame = -2
Query: 694 PPPPXXXGG-----GXXXXXXPPX--PXXXGGXXXXXXXFXGXPPPXXXXXGGXFXXXXK 536
PPPP GG G PP P GG G PPP G F
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 535 XPPXXGGFFXPXPXRGXKXXPXKGXGFXXGPXXXFKXRGFPECSLDLVSKSTWCETSRNR 356
PP G F P P K GP F D+ +S W T+ +
Sbjct: 786 PPPPP-GMFAPMAPVIPDYLPPKKVPKVDGPMRKFPWGAHTINPRDIPRESFWVGTNEEQ 844
Score = 33.5 bits (73), Expect = 0.16
Identities = 27/88 (30%), Positives = 27/88 (30%)
Frame = +2
Query: 422 PXLEXXXGAPXKTXPFXGXXFXPPXXXGXKKPPXXWGXFXPXXKXXPXXXXXGGGXPXKX 601
P L G P P G PP G PP G P P GG P
Sbjct: 717 PGLPPITGGPPPPPPPGGL---PPITGGPPPPPPP-GGLPPISGGPPPPPPPPGGCP--- 769
Query: 602 XXXXXXPPPXXXXXGGXXXXPPPPXXXG 685
PPP GG PPPP G
Sbjct: 770 ------PPPPPPPPGGFKGGPPPPPPPG 791
Score = 32.3 bits (70), Expect = 0.36
Identities = 21/68 (30%), Positives = 21/68 (30%)
Frame = +2
Query: 491 PXXXGXKKPPXXWGXFXPXXKXXPXXXXXGGGXPXKXXXXXXXPPPXXXXXGGXXXXPPP 670
P G PP G P P GG P PPP GG PPP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP-----GGCPPPPPP 774
Query: 671 PXXXGGGG 694
P G G
Sbjct: 775 PPPGGFKG 782
Score = 28.3 bits (60), Expect = 5.9
Identities = 23/78 (29%), Positives = 23/78 (29%), Gaps = 7/78 (8%)
Frame = -3
Query: 723 PPXPXXXXXXPPPPXXXGG-----GGXXXXPP--XXXXXGGGXXXXXXXFXGXPPPXXXX 565
PP PPPP GG GG PP GG G PPP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Query: 564 XGXXFXXGXKXPXFXGGF 511
F G P G F
Sbjct: 776 PPGGFKGGPPPPPPPGMF 793
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/81 (34%), Positives = 28/81 (34%), Gaps = 3/81 (3%)
Frame = -1
Query: 722 PPP--PXXXXXXPPPPXXGGGXGXXXXPPXPXXXGGGXXXXXXXXXXPPPXXXXXGGXXX 549
PPP P PPPP GG PP P GG PPP GG
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG----LPPISGGPPPPPPPPGGCPP 770
Query: 548 XXGKXXP-XFXGVFXPPPXPG 489
P F G PPP PG
Sbjct: 771 PPPPPPPGGFKGGPPPPPPPG 791
Score = 34.7 bits (76), Expect = 0.068
Identities = 32/120 (26%), Positives = 36/120 (30%), Gaps = 7/120 (5%)
Frame = -2
Query: 694 PPPPXXXGG-----GXXXXXXPPX--PXXXGGXXXXXXXFXGXPPPXXXXXGGXFXXXXK 536
PPPP GG G PP P GG G PPP G F
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 535 XPPXXGGFFXPXPXRGXKXXPXKGXGFXXGPXXXFKXRGFPECSLDLVSKSTWCETSRNR 356
PP G F P P K GP F D+ +S W T+ +
Sbjct: 786 PPPPP-GMFAPMAPVIPDYLPPKKVPKVDGPMRKFPWGAHTINPRDIPRESFWVGTNEEQ 844
Score = 33.5 bits (73), Expect = 0.16
Identities = 27/88 (30%), Positives = 27/88 (30%)
Frame = +2
Query: 422 PXLEXXXGAPXKTXPFXGXXFXPPXXXGXKKPPXXWGXFXPXXKXXPXXXXXGGGXPXKX 601
P L G P P G PP G PP G P P GG P
Sbjct: 717 PGLPPITGGPPPPPPPGGL---PPITGGPPPPPPP-GGLPPISGGPPPPPPPPGGCP--- 769
Query: 602 XXXXXXPPPXXXXXGGXXXXPPPPXXXG 685
PPP GG PPPP G
Sbjct: 770 ------PPPPPPPPGGFKGGPPPPPPPG 791
Score = 32.3 bits (70), Expect = 0.36
Identities = 21/68 (30%), Positives = 21/68 (30%)
Frame = +2
Query: 491 PXXXGXKKPPXXWGXFXPXXKXXPXXXXXGGGXPXKXXXXXXXPPPXXXXXGGXXXXPPP 670
P G PP G P P GG P PPP GG PPP
Sbjct: 720 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP-----GGCPPPPPP 774
Query: 671 PXXXGGGG 694
P G G
Sbjct: 775 PPPGGFKG 782
Score = 28.3 bits (60), Expect = 5.9
Identities = 23/78 (29%), Positives = 23/78 (29%), Gaps = 7/78 (8%)
Frame = -3
Query: 723 PPXPXXXXXXPPPPXXXGG-----GGXXXXPP--XXXXXGGGXXXXXXXFXGXPPPXXXX 565
PP PPPP GG GG PP GG G PPP
Sbjct: 716 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 775
Query: 564 XGXXFXXGXKXPXFXGGF 511
F G P G F
Sbjct: 776 PPGGFKGGPPPPPPPGMF 793
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/81 (34%), Positives = 28/81 (34%), Gaps = 3/81 (3%)
Frame = -1
Query: 722 PPP--PXXXXXXPPPPXXGGGXGXXXXPPXPXXXGGGXXXXXXXXXXPPPXXXXXGGXXX 549
PPP P PPPP GG PP P GG PPP GG
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGG----LPPISGGPPPPPPPPGGCPP 353
Query: 548 XXGKXXP-XFXGVFXPPPXPG 489
P F G PPP PG
Sbjct: 354 PPPPPPPGGFKGGPPPPPPPG 374
Score = 34.7 bits (76), Expect = 0.068
Identities = 32/120 (26%), Positives = 36/120 (30%), Gaps = 7/120 (5%)
Frame = -2
Query: 694 PPPPXXXGG-----GXXXXXXPPX--PXXXGGXXXXXXXFXGXPPPXXXXXGGXFXXXXK 536
PPPP GG G PP P GG G PPP G F
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Query: 535 XPPXXGGFFXPXPXRGXKXXPXKGXGFXXGPXXXFKXRGFPECSLDLVSKSTWCETSRNR 356
PP G F P P K GP F D+ +S W T+ +
Sbjct: 369 PPPPP-GMFAPMAPVIPDYLPPKKVPKVDGPMRKFPWGAHTINPRDIPRESFWVGTNEEQ 427
Score = 33.5 bits (73), Expect = 0.16
Identities = 27/88 (30%), Positives = 27/88 (30%)
Frame = +2
Query: 422 PXLEXXXGAPXKTXPFXGXXFXPPXXXGXKKPPXXWGXFXPXXKXXPXXXXXGGGXPXKX 601
P L G P P G PP G PP G P P GG P
Sbjct: 300 PGLPPITGGPPPPPPPGGL---PPITGGPPPPPPP-GGLPPISGGPPPPPPPPGGCP--- 352
Query: 602 XXXXXXPPPXXXXXGGXXXXPPPPXXXG 685
PPP GG PPPP G
Sbjct: 353 ------PPPPPPPPGGFKGGPPPPPPPG 374
Score = 32.3 bits (70), Expect = 0.36
Identities = 21/68 (30%), Positives = 21/68 (30%)
Frame = +2
Query: 491 PXXXGXKKPPXXWGXFXPXXKXXPXXXXXGGGXPXKXXXXXXXPPPXXXXXGGXXXXPPP 670
P G PP G P P GG P PPP GG PPP
Sbjct: 303 PPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP-----GGCPPPPPP 357
Query: 671 PXXXGGGG 694
P G G
Sbjct: 358 PPPGGFKG 365
Score = 28.3 bits (60), Expect = 5.9
Identities = 23/78 (29%), Positives = 23/78 (29%), Gaps = 7/78 (8%)
Frame = -3
Query: 723 PPXPXXXXXXPPPPXXXGG-----GGXXXXPP--XXXXXGGGXXXXXXXFXGXPPPXXXX 565
PP PPPP GG GG PP GG G PPP
Sbjct: 299 PPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPP 358
Query: 564 XGXXFXXGXKXPXFXGGF 511
F G P G F
Sbjct: 359 PPGGFKGGPPPPPPPGMF 376
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/80 (30%), Positives = 24/80 (30%), Gaps = 3/80 (3%)
Frame = -1
Query: 722 PPPPXXXXXXPPPPXXG---GGXGXXXXPPXPXXXGGGXXXXXXXXXXPPPXXXXXGGXX 552
PPP PPPP G G G PP P G PPP GG
Sbjct: 289 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMP 348
Query: 551 XXXGKXXPXFXGVFXPPPXP 492
P PPP P
Sbjct: 349 PPPPPRYPSAGPGMYPPPPP 368
Score = 31.1 bits (67), Expect = 0.84
Identities = 21/84 (25%), Positives = 21/84 (25%)
Frame = -2
Query: 694 PPPPXXXGGGXXXXXXPPXPXXXGGXXXXXXXFXGXPPPXXXXXGGXFXXXXKXPPXXGG 515
PPPP G PP P PPP GG P G
Sbjct: 301 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGP 360
Query: 514 FFXPXPXRGXKXXPXKGXGFXXGP 443
P P P G G P
Sbjct: 361 GMYPPPPPSRPPAPPSGHGMIPPP 384
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/78 (25%), Positives = 21/78 (26%), Gaps = 1/78 (1%)
Frame = -1
Query: 722 PPPPXXXXXXPPPPXXGGGXGXXXXPPXPXXXGGGXXXXXXXXXXPPPXXXXXG-GXXXX 546
P PP PPP G PP P G PP G G
Sbjct: 276 PMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPP 335
Query: 545 XGKXXPXFXGVFXPPPXP 492
+ G PPP P
Sbjct: 336 PPPPGMRYPGGMPPPPPP 353
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/77 (25%), Positives = 20/77 (25%)
Frame = +2
Query: 443 GAPXKTXPFXGXXFXPPXXXGXKKPPXXWGXFXPXXKXXPXXXXXGGGXPXKXXXXXXXP 622
G P P F PP G PP G P P P
Sbjct: 312 GMPGMPPPPPPSRFGPPGMGGMPPPPPP-GMRYPGGMPPPPPPRYPSAGPGMYPPPPPSR 370
Query: 623 PPXXXXXGGXXXXPPPP 673
PP G PPPP
Sbjct: 371 PPAPPSGHGMIPPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/80 (30%), Positives = 24/80 (30%), Gaps = 3/80 (3%)
Frame = -1
Query: 722 PPPPXXXXXXPPPPXXG---GGXGXXXXPPXPXXXGGGXXXXXXXXXXPPPXXXXXGGXX 552
PPP PPPP G G G PP P G PPP GG
Sbjct: 299 PPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMP 358
Query: 551 XXXGKXXPXFXGVFXPPPXP 492
P PPP P
Sbjct: 359 PPPPPRYPSAGPGMYPPPPP 378
Score = 31.1 bits (67), Expect = 0.84
Identities = 21/84 (25%), Positives = 21/84 (25%)
Frame = -2
Query: 694 PPPPXXXGGGXXXXXXPPXPXXXGGXXXXXXXFXGXPPPXXXXXGGXFXXXXKXPPXXGG 515
PPPP G PP P PPP GG P G
Sbjct: 311 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGP 370
Query: 514 FFXPXPXRGXKXXPXKGXGFXXGP 443
P P P G G P
Sbjct: 371 GMYPPPPPSRPPAPPSGHGMIPPP 394
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/78 (25%), Positives = 21/78 (26%), Gaps = 1/78 (1%)
Frame = -1
Query: 722 PPPPXXXXXXPPPPXXGGGXGXXXXPPXPXXXGGGXXXXXXXXXXPPPXXXXXG-GXXXX 546
P PP PPP G PP P G PP G G
Sbjct: 286 PMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPP 345
Query: 545 XGKXXPXFXGVFXPPPXP 492
+ G PPP P
Sbjct: 346 PPPPGMRYPGGMPPPPPP 363
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/77 (25%), Positives = 20/77 (25%)
Frame = +2
Query: 443 GAPXKTXPFXGXXFXPPXXXGXKKPPXXWGXFXPXXKXXPXXXXXGGGXPXKXXXXXXXP 622
G P P F PP G PP G P P P
Sbjct: 322 GMPGMPPPPPPSRFGPPGMGGMPPPPPP-GMRYPGGMPPPPPPRYPSAGPGMYPPPPPSR 380
Query: 623 PPXXXXXGGXXXXPPPP 673
PP G PPPP
Sbjct: 381 PPAPPSGHGMIPPPPPP 397
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 36.3 bits (80), Expect = 0.022
Identities = 26/105 (24%), Positives = 28/105 (26%), Gaps = 3/105 (2%)
Frame = -1
Query: 719 PPPXXXXXXPPPPXXGGGXGXXXXPPXPXXXGGGXXXXXXXXXXPPP---XXXXXGGXXX 549
PPP PPPP G P P GG PPP G
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
Query: 548 XXGKXXPXFXGVFXPPPXPGXXKXXXKRGXFXXGPXXPXQXXGFP 414
P G PPP P + +R P G P
Sbjct: 315 PQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRP 359
Score = 31.5 bits (68), Expect = 0.64
Identities = 21/80 (26%), Positives = 22/80 (27%)
Frame = +2
Query: 449 PXKTXPFXGXXFXPPXXXGXKKPPXXWGXFXPXXKXXPXXXXXGGGXPXKXXXXXXXPPP 628
P + P G PP PP G P P GG P PPP
Sbjct: 243 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP---PPRAGSPPP 299
Query: 629 XXXXXGGXXXXPPPPXXXGG 688
G PP GG
Sbjct: 300 PPPPRGSPPTGSLPPPQAGG 319
Score = 30.7 bits (66), Expect = 1.1
Identities = 27/101 (26%), Positives = 27/101 (26%)
Frame = -1
Query: 716 PPXXXXXXPPPPXXGGGXGXXXXPPXPXXXGGGXXXXXXXXXXPPPXXXXXGGXXXXXGK 537
PP PPPP PP P G PPP G
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGS---PPPPRTGSPPPPPTGSPPPPPAGGS 288
Query: 536 XXPXFXGVFXPPPXPGXXKXXXKRGXFXXGPXXPXQXXGFP 414
P G PPP P RG G P Q G P
Sbjct: 289 PPPPRAGSPPPPPPP--------RGSPPTGSLPPPQAGGSP 321
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 36.3 bits (80), Expect = 0.022
Identities = 26/105 (24%), Positives = 28/105 (26%), Gaps = 3/105 (2%)
Frame = -1
Query: 719 PPPXXXXXXPPPPXXGGGXGXXXXPPXPXXXGGGXXXXXXXXXXPPP---XXXXXGGXXX 549
PPP PPPP G P P GG PPP G
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
Query: 548 XXGKXXPXFXGVFXPPPXPGXXKXXXKRGXFXXGPXXPXQXXGFP 414
P G PPP P + +R P G P
Sbjct: 336 PQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRP 380
Score = 31.5 bits (68), Expect = 0.64
Identities = 21/80 (26%), Positives = 22/80 (27%)
Frame = +2
Query: 449 PXKTXPFXGXXFXPPXXXGXKKPPXXWGXFXPXXKXXPXXXXXGGGXPXKXXXXXXXPPP 628
P + P G PP PP G P P GG P PPP
Sbjct: 264 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP---PPRAGSPPP 320
Query: 629 XXXXXGGXXXXPPPPXXXGG 688
G PP GG
Sbjct: 321 PPPPRGSPPTGSLPPPQAGG 340
Score = 30.7 bits (66), Expect = 1.1
Identities = 27/101 (26%), Positives = 27/101 (26%)
Frame = -1
Query: 716 PPXXXXXXPPPPXXGGGXGXXXXPPXPXXXGGGXXXXXXXXXXPPPXXXXXGGXXXXXGK 537
PP PPPP PP P G PPP G
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGS---PPPPRTGSPPPPPTGSPPPPPAGGS 309
Query: 536 XXPXFXGVFXPPPXPGXXKXXXKRGXFXXGPXXPXQXXGFP 414
P G PPP P RG G P Q G P
Sbjct: 310 PPPPRAGSPPPPPPP--------RGSPPTGSLPPPQAGGSP 342
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 36.3 bits (80), Expect = 0.022
Identities = 26/105 (24%), Positives = 28/105 (26%), Gaps = 3/105 (2%)
Frame = -1
Query: 719 PPPXXXXXXPPPPXXGGGXGXXXXPPXPXXXGGGXXXXXXXXXXPPP---XXXXXGGXXX 549
PPP PPPP G P P GG PPP G
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
Query: 548 XXGKXXPXFXGVFXPPPXPGXXKXXXKRGXFXXGPXXPXQXXGFP 414
P G PPP P + +R P G P
Sbjct: 321 PQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSPPTGRP 365
Score = 31.5 bits (68), Expect = 0.64
Identities = 21/80 (26%), Positives = 22/80 (27%)
Frame = +2
Query: 449 PXKTXPFXGXXFXPPXXXGXKKPPXXWGXFXPXXKXXPXXXXXGGGXPXKXXXXXXXPPP 628
P + P G PP PP G P P GG P PPP
Sbjct: 249 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPP---PPRAGSPPP 305
Query: 629 XXXXXGGXXXXPPPPXXXGG 688
G PP GG
Sbjct: 306 PPPPRGSPPTGSLPPPQAGG 325
Score = 30.7 bits (66), Expect = 1.1
Identities = 27/101 (26%), Positives = 27/101 (26%)
Frame = -1
Query: 716 PPXXXXXXPPPPXXGGGXGXXXXPPXPXXXGGGXXXXXXXXXXPPPXXXXXGGXXXXXGK 537
PP PPPP PP P G PPP G
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGS---PPPPRTGSPPPPPTGSPPPPPAGGS 294
Query: 536 XXPXFXGVFXPPPXPGXXKXXXKRGXFXXGPXXPXQXXGFP 414
P G PPP P RG G P Q G P
Sbjct: 295 PPPPRAGSPPPPPPP--------RGSPPTGSLPPPQAGGSP 327
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 35.9 bits (79), Expect = 0.030
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = +1
Query: 244 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 366
GC CC + C R T R+ CCT C R C CG
Sbjct: 82 GCGCCCCRPKCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +1
Query: 244 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 366
GC CC C R T R+ CCT C R C CG
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +1
Query: 244 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 366
GC CC C R T R+ CCT C R C CG
Sbjct: 81 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 122
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +1
Query: 244 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 366
GC CC C R T R+ CCT C R C CG
Sbjct: 82 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +1
Query: 244 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 366
GC CC C R T R+ CCT C R C CG
Sbjct: 83 GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 34.7 bits (76), Expect = 0.068
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = -1
Query: 722 PPPPXXXXXXPPPPXXGGGXGXXXXPPXPXXXGGGXXXXXXXXXXPPP 579
PPPP PPPP GG PP P GG PPP
Sbjct: 75 PPPPGPGGIPPPPPMFAGG-----IPPPPPMMGGIPPPPPMFGAPPPP 117
Score = 31.9 bits (69), Expect = 0.48
Identities = 23/76 (30%), Positives = 23/76 (30%)
Frame = -1
Query: 719 PPPXXXXXXPPPPXXGGGXGXXXXPPXPXXXGGGXXXXXXXXXXPPPXXXXXGGXXXXXG 540
PPP PPPP GG PP P GG PP G
Sbjct: 66 PPPVPNGFIPPPPGPGG------IPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPP--- 116
Query: 539 KXXPXFXGVFXPPPXP 492
P GV PP P
Sbjct: 117 PPPPSGLGVAPQPPRP 132
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Frame = -1
Query: 722 PPPPXXXXXXPPPPXXGGGXGXXXXPPXP--XXXGGG 618
PPP PPPP GG G PP P GGG
Sbjct: 772 PPPRGGMHHMPPPPSFRGGRGGHGGPPPPHFDRRGGG 808
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.9 bits (69), Expect = 0.48
Identities = 15/30 (50%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +1
Query: 637 GXGGXXXXPXPPPXXGGG-GXXXXXXGGGG 723
G GG P PPP GGG G GGGG
Sbjct: 47 GCGGGCAPPPPPPACGGGCGGGGGGCGGGG 76
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
Frame = +1
Query: 637 GXGGXXXXPXPPPXXGGG-GXXXXXXGGG 720
G GG P PPP GGG G GGG
Sbjct: 104 GCGGGCAPPPPPPACGGGCGGGGGGCGGG 132
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +1
Query: 580 GGGXXKXXXXXXXPPPXXXGXGGXXXXPXPPPXXGGGGXXXXXXGGGG 723
GGG PPP G G GGGG GGGG
Sbjct: 101 GGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGG 148
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 31.9 bits (69), Expect = 0.48
Identities = 31/113 (27%), Positives = 34/113 (30%), Gaps = 10/113 (8%)
Frame = -1
Query: 722 PPPPXXXXXXPPPPXXG-----GGXGXXXXPPXPXXXGGGXXXXXXXXXXPPPXXXXXGG 558
PPPP PPPP G G G P P G G PPP
Sbjct: 33 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTG--------TPPPPPTGEPQD 84
Query: 557 XXXXXG----KXXPXFXGVFXPPPXP-GXXKXXXKRGXFXXGPXXPXQXXGFP 414
G + P G PPP P G + G P P + G P
Sbjct: 85 LSAEEGNASRRPPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSP 137
Score = 31.5 bits (68), Expect = 0.64
Identities = 28/108 (25%), Positives = 30/108 (27%), Gaps = 5/108 (4%)
Frame = -1
Query: 722 PPPPXXXXXXPPPPXXG-----GGXGXXXXPPXPXXXGGGXXXXXXXXXXPPPXXXXXGG 558
PPPP PPPP G G G P P G G P G
Sbjct: 127 PPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPPTG---EPQDLSTEG 183
Query: 557 XXXXXGKXXPXFXGVFXPPPXPGXXKXXXKRGXFXXGPXXPXQXXGFP 414
P G PPP G + G P P + G P
Sbjct: 184 NASRRPPPPPKGTGT-PPPPPTGEPQDLSAEGYASRRPPPPPKGTGSP 230
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 5/40 (12%)
Frame = -1
Query: 722 PPPPXXXXXXPPPPXXG-----GGXGXXXXPPXPXXXGGG 618
PPPP PPPP G G G P P G G
Sbjct: 251 PPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTG 290
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 31.5 bits (68), Expect = 0.64
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = -2
Query: 694 PPPPXXXGGGXXXXXXPPXPXXXGGXXXXXXXFXGXPPP 578
PPPP GGG PP P GG + G P
Sbjct: 41 PPPPPPCGGGYEAPPPPPPPSYAGGPSYAGPSYAGSYGP 79
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 619 PPPXXXGXGGXXXXPXPPPXXGGG 690
PPP G G P PPP GG
Sbjct: 42 PPPPPCGGGYEAPPPPPPPSYAGG 65
>Z81573-2|CAB04626.1| 294|Caenorhabditis elegans Hypothetical
protein M02G9.3 protein.
Length = 294
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/67 (28%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = +1
Query: 217 VSYLGKTCSG---CSCCRSHREPR*CVRHLITALRSACCTEVCRAHRCYAYCGTFHTRCF 387
VS + + C G SCC S C+ + +S+C T +C+ +C C T
Sbjct: 27 VSRVRRQCCGRSSSSCCSSSSSNSYCIPVCMAQCQSSCTTPICQ-QQCSNQCNQQCTSIT 85
Query: 388 Y*PDPSC 408
PSC
Sbjct: 86 ISSGPSC 92
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 29.9 bits (64), Expect = 1.9
Identities = 26/103 (25%), Positives = 26/103 (25%)
Frame = -1
Query: 719 PPPXXXXXXPPPPXXGGGXGXXXXPPXPXXXGGGXXXXXXXXXXPPPXXXXXGGXXXXXG 540
P P P P GGG G PP P G P G
Sbjct: 150 PGPKGPNGNPGAPAQGGGQG-PPGPPGPAGSAGSPGQAGAPGNPGSPGKSGQRGRGLPGP 208
Query: 539 KXXPXFXGVFXPPPXPGXXKXXXKRGXFXXGPXXPXQXXGFPG 411
P G P PG G GP P G PG
Sbjct: 209 SGAPGSQGPPGAPGQPGSGNAPGPAG--PPGPAGPNGQPGHPG 249
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/55 (29%), Positives = 16/55 (29%)
Frame = -3
Query: 693 PPPPXXXGGGGXXXXPPXXXXXGGGXXXXXXXFXGXPPPXXXXXGXXFXXGXKXP 529
PPPP GG PP G G PPP F K P
Sbjct: 540 PPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPPPPSFMFNGKVP 594
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/86 (27%), Positives = 25/86 (29%), Gaps = 2/86 (2%)
Frame = +3
Query: 444 GPXXKPXPFXGXFXXPRX--GXGXKNPPKXGGXFXXXXXXPPXXXXXGGGXPXXXXXXXX 617
GP P F P+ G G PP GG PP G G P
Sbjct: 385 GPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAY 444
Query: 618 XPPXXXGXGGXXXXXXPPPXXXGGGG 695
PP G PPP G G
Sbjct: 445 GPPPT----GFPPVGAPPPGAAGAPG 466
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 29.1 bits (62), Expect = 3.4
Identities = 26/103 (25%), Positives = 26/103 (25%)
Frame = -1
Query: 719 PPPXXXXXXPPPPXXGGGXGXXXXPPXPXXXGGGXXXXXXXXXXPPPXXXXXGGXXXXXG 540
P P P P GGG G PP P G P G
Sbjct: 150 PGPKGPNGNPGAPAQGGGQG-PPGPPGPAGSAGSPGQAGAPGNPGSPGKSGQRGRGLPGP 208
Query: 539 KXXPXFXGVFXPPPXPGXXKXXXKRGXFXXGPXXPXQXXGFPG 411
P G P PG G GP P G PG
Sbjct: 209 SGAPGPQGPPGAPGQPGSGNAPGPAG--PPGPAGPNGQPGHPG 249
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 29.1 bits (62), Expect = 3.4
Identities = 26/106 (24%), Positives = 26/106 (24%), Gaps = 2/106 (1%)
Frame = -1
Query: 722 PPPPXXXXXXPPPPXXGGGXGXXXXPPXPXXXGGGXXXXXXXXXXPP--PXXXXXGGXXX 549
PP P P PP G G P P G P P G
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASE 213
Query: 548 XXGKXXPXFXGVFXPPPXPGXXKXXXKRGXFXXGPXXPXQXXGFPG 411
G P G P G G GP P G PG
Sbjct: 214 QGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAPG 259
Score = 28.7 bits (61), Expect = 4.5
Identities = 30/106 (28%), Positives = 30/106 (28%), Gaps = 6/106 (5%)
Frame = -1
Query: 692 PPPPXXGGGXGXXXXPPXPXXXG--GGXXXXXXXXXXP---PPXXXXXGGXXXXXGKXXP 528
P PP GG G P P G G P PP GG G P
Sbjct: 104 PGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGP 163
Query: 527 XFXGVFXPPPXPGXXKXXXKRGXF-XXGPXXPXQXXGFPGMQLGSG 393
G P PG G GP P G PG G G
Sbjct: 164 --PGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPG 207
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.1 bits (62), Expect = 3.4
Identities = 26/106 (24%), Positives = 26/106 (24%), Gaps = 2/106 (1%)
Frame = -1
Query: 722 PPPPXXXXXXPPPPXXGGGXGXXXXPPXPXXXGGGXXXXXXXXXXPP--PXXXXXGGXXX 549
PP P P PP G G P P G P P G
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASE 213
Query: 548 XXGKXXPXFXGVFXPPPXPGXXKXXXKRGXFXXGPXXPXQXXGFPG 411
G P G P G G GP P G PG
Sbjct: 214 QGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAPG 259
Score = 28.7 bits (61), Expect = 4.5
Identities = 30/106 (28%), Positives = 30/106 (28%), Gaps = 6/106 (5%)
Frame = -1
Query: 692 PPPPXXGGGXGXXXXPPXPXXXG--GGXXXXXXXXXXP---PPXXXXXGGXXXXXGKXXP 528
P PP GG G P P G G P PP GG G P
Sbjct: 104 PGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGP 163
Query: 527 XFXGVFXPPPXPGXXKXXXKRGXF-XXGPXXPXQXXGFPGMQLGSG 393
G P PG G GP P G PG G G
Sbjct: 164 --PGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPG 207
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 29.1 bits (62), Expect = 3.4
Identities = 26/106 (24%), Positives = 26/106 (24%), Gaps = 2/106 (1%)
Frame = -1
Query: 722 PPPPXXXXXXPPPPXXGGGXGXXXXPPXPXXXGGGXXXXXXXXXXPP--PXXXXXGGXXX 549
PP P P PP G G P P G P P G
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASE 213
Query: 548 XXGKXXPXFXGVFXPPPXPGXXKXXXKRGXFXXGPXXPXQXXGFPG 411
G P G P G G GP P G PG
Sbjct: 214 QGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAPG 259
Score = 28.7 bits (61), Expect = 4.5
Identities = 30/106 (28%), Positives = 30/106 (28%), Gaps = 6/106 (5%)
Frame = -1
Query: 692 PPPPXXGGGXGXXXXPPXPXXXG--GGXXXXXXXXXXP---PPXXXXXGGXXXXXGKXXP 528
P PP GG G P P G G P PP GG G P
Sbjct: 104 PGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGP 163
Query: 527 XFXGVFXPPPXPGXXKXXXKRGXF-XXGPXXPXQXXGFPGMQLGSG 393
G P PG G GP P G PG G G
Sbjct: 164 --PGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPG 207
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.1 bits (62), Expect = 3.4
Identities = 26/106 (24%), Positives = 26/106 (24%), Gaps = 2/106 (1%)
Frame = -1
Query: 722 PPPPXXXXXXPPPPXXGGGXGXXXXPPXPXXXGGGXXXXXXXXXXPP--PXXXXXGGXXX 549
PP P P PP G G P P G P P G
Sbjct: 154 PPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASE 213
Query: 548 XXGKXXPXFXGVFXPPPXPGXXKXXXKRGXFXXGPXXPXQXXGFPG 411
G P G P G G GP P G PG
Sbjct: 214 QGGPGEPGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAPG 259
Score = 28.7 bits (61), Expect = 4.5
Identities = 30/106 (28%), Positives = 30/106 (28%), Gaps = 6/106 (5%)
Frame = -1
Query: 692 PPPPXXGGGXGXXXXPPXPXXXG--GGXXXXXXXXXXP---PPXXXXXGGXXXXXGKXXP 528
P PP GG G P P G G P PP GG G P
Sbjct: 104 PGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGP 163
Query: 527 XFXGVFXPPPXPGXXKXXXKRGXF-XXGPXXPXQXXGFPGMQLGSG 393
G P PG G GP P G PG G G
Sbjct: 164 --PGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPG 207
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -1
Query: 722 PPPPXXXXXXPPPPXXGGGXGXXXXPPXP 636
PPPP PPP G G PP P
Sbjct: 297 PPPPRGHFPPPPPHFMGRGMPPPFMPPPP 325
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -1
Query: 722 PPPPXXXXXXPPPPXXGGGXGXXXXPPXP 636
PPPP PPP G G PP P
Sbjct: 297 PPPPRGHFPPPPPHFMGRGMPPPFMPPPP 325
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/62 (25%), Positives = 16/62 (25%)
Frame = +2
Query: 488 PPXXXGXKKPPXXWGXFXPXXKXXPXXXXXGGGXPXKXXXXXXXPPPXXXXXGGXXXXPP 667
PP PP G P P PPP GG PP
Sbjct: 535 PPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPP 594
Query: 668 PP 673
PP
Sbjct: 595 PP 596
Score = 28.7 bits (61), Expect = 4.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 722 PPPPXXXXXXPPPPXXGGGXG 660
PPPP PPPP GG G
Sbjct: 581 PPPPMLGGPPPPPPPPGGLMG 601
>U28991-12|AAA68386.2| 550|Caenorhabditis elegans Hypothetical
protein F08F8.2 protein.
Length = 550
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 333 LPRTPVLRLLRDVSHQVLLLTRSKLHSGKPR 425
+PR V + LR Q+ LT +KLH G R
Sbjct: 343 IPREVVTKTLRTTPEQLAYLTTTKLHIGSSR 373
>AL110482-8|CAE17990.1| 193|Caenorhabditis elegans Hypothetical
protein Y39G8B.10 protein.
Length = 193
Score = 28.3 bits (60), Expect = 5.9
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 196 WYPCDQLVSYLGKTCSGCS 252
WY C + Y KTC CS
Sbjct: 156 WYKCSDRIKYCPKTCGYCS 174
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 27.9 bits (59), Expect = 7.8
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +1
Query: 580 GGGXXKXXXXXXXPPPXXXGXGGXXXXPXPPPXXGGG 690
GGG PPP G P PPP G G
Sbjct: 29 GGGCAPAAPACAPPPPPMCGCAPPPPPPPPPPMCGCG 65
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +1
Query: 637 GXGGXXXXPXPPPXXGGGGXXXXXXGGG 720
G GG P PPP GGG GG
Sbjct: 23 GGGGGCCAPPPPPPCGGGCGGGAPAAGG 50
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,555,971
Number of Sequences: 27780
Number of extensions: 456480
Number of successful extensions: 2463
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1719
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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