Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_I20
(826 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC025743-1|AAH25743.1| 330|Homo sapiens MPP3 protein protein. 34 0.72
X52008-1|CAA36257.1| 452|Homo sapiens inhibitory glycine recept... 33 1.7
U77731-2|AAB38273.1| 360|Homo sapiens glycine receptor alpha 2B... 33 1.7
U77731-1|AAB38272.1| 360|Homo sapiens glycine receptor alpha 2 ... 33 1.7
CR450343-1|CAG29339.1| 452|Homo sapiens GLRA2 protein. 33 1.7
BC032864-1|AAH32864.1| 452|Homo sapiens glycine receptor, alpha... 33 1.7
AY437084-1|AAR87843.1| 452|Homo sapiens glycine receptor alpha2... 33 1.7
AY437083-1|AAR87842.1| 452|Homo sapiens glycine receptor alpha2... 33 1.7
AF053495-1|AAC35290.1| 452|Homo sapiens glycine receptor alpha ... 33 1.7
BC111802-1|AAI11803.1| 465|Homo sapiens CHRNG protein protein. 32 2.2
U02619-1|AAA17985.1| 2109|Homo sapiens TFIIIC Box B-binding subu... 32 2.9
BC052642-1|AAH52642.1| 136|Homo sapiens GTF3C1 protein protein. 32 2.9
BC044857-1|AAH44857.1| 978|Homo sapiens GTF3C1 protein protein. 32 2.9
AC002303-1|AAB67637.1| 1857|Homo sapiens Transcription factor (T... 32 2.9
X52009-1|CAA36258.1| 449|Homo sapiens inhibitory glycine recept... 31 3.8
BC114967-1|AAI14968.1| 366|Homo sapiens GLRA1 protein protein. 31 3.8
BC114947-1|AAI14948.1| 457|Homo sapiens GLRA1 protein protein. 31 3.8
BC074980-1|AAH74980.1| 449|Homo sapiens glycine receptor, alpha... 31 3.8
U93917-1|AAC39917.1| 449|Homo sapiens glycine receptor alpha 3 ... 31 6.7
BC036086-1|AAH36086.1| 464|Homo sapiens glycine receptor, alpha... 31 6.7
AK122582-1|BAC56923.1| 1383|Homo sapiens FLJ00269 protein protein. 31 6.7
AF017724-1|AAC39919.1| 465|Homo sapiens glycine receptor alpha ... 31 6.7
Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for ... 30 8.8
X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor pr... 30 8.8
X01715-1|CAA25861.1| 520|Homo sapiens acetylcholine receptor ga... 30 8.8
S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine r... 30 8.8
BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding prote... 30 8.8
BC021908-1|AAH21908.1| 485|Homo sapiens zinc finger, DHHC-type ... 30 8.8
BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein. 30 8.8
BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein. 30 8.8
BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding prote... 30 8.8
AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding prot... 30 8.8
AC092165-3|AAY24103.1| 520|Homo sapiens unknown protein. 30 8.8
AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein. 30 8.8
AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein N... 30 8.8
>BC025743-1|AAH25743.1| 330|Homo sapiens MPP3 protein protein.
Length = 330
Score = 33.9 bits (74), Expect = 0.72
Identities = 24/62 (38%), Positives = 31/62 (50%)
Frame = -2
Query: 474 CIEIGVLMSKRFIQETEPLLDXTGAESVVPGGGCSRV*QYHVRPPQAFRGHQPSAAAPFP 295
C E G+ +R + E P L+ PGGG + HV QA RGHQPS + P P
Sbjct: 247 CQEAGLPFQRRQVLEGRPALEGQAG----PGGG--EPGRPHVVAGQASRGHQPS-SRPHP 299
Query: 294 LR 289
L+
Sbjct: 300 LQ 301
>X52008-1|CAA36257.1| 452|Homo sapiens inhibitory glycine receptor
protein.
Length = 452
Score = 32.7 bits (71), Expect = 1.7
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +2
Query: 413 SNNGSVSWIKRLDISTPISMQXDNWPNDMQTCXFQXXVLGCPNXD--XXGFGDGP 571
S NG V + RL ++ M N+P D+QTC Q G D DGP
Sbjct: 155 SKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
>U77731-2|AAB38273.1| 360|Homo sapiens glycine receptor alpha 2B
subunit protein.
Length = 360
Score = 32.7 bits (71), Expect = 1.7
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +2
Query: 413 SNNGSVSWIKRLDISTPISMQXDNWPNDMQTCXFQXXVLGCPNXD--XXGFGDGP 571
S NG V + RL ++ M N+P D+QTC Q G D DGP
Sbjct: 155 SKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
>U77731-1|AAB38272.1| 360|Homo sapiens glycine receptor alpha 2
subunit protein.
Length = 360
Score = 32.7 bits (71), Expect = 1.7
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +2
Query: 413 SNNGSVSWIKRLDISTPISMQXDNWPNDMQTCXFQXXVLGCPNXD--XXGFGDGP 571
S NG V + RL ++ M N+P D+QTC Q G D DGP
Sbjct: 155 SKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
>CR450343-1|CAG29339.1| 452|Homo sapiens GLRA2 protein.
Length = 452
Score = 32.7 bits (71), Expect = 1.7
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +2
Query: 413 SNNGSVSWIKRLDISTPISMQXDNWPNDMQTCXFQXXVLGCPNXD--XXGFGDGP 571
S NG V + RL ++ M N+P D+QTC Q G D DGP
Sbjct: 155 SKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
>BC032864-1|AAH32864.1| 452|Homo sapiens glycine receptor, alpha 2
protein.
Length = 452
Score = 32.7 bits (71), Expect = 1.7
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +2
Query: 413 SNNGSVSWIKRLDISTPISMQXDNWPNDMQTCXFQXXVLGCPNXD--XXGFGDGP 571
S NG V + RL ++ M N+P D+QTC Q G D DGP
Sbjct: 155 SKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
>AY437084-1|AAR87843.1| 452|Homo sapiens glycine receptor alpha2
subunit B protein.
Length = 452
Score = 32.7 bits (71), Expect = 1.7
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +2
Query: 413 SNNGSVSWIKRLDISTPISMQXDNWPNDMQTCXFQXXVLGCPNXD--XXGFGDGP 571
S NG V + RL ++ M N+P D+QTC Q G D DGP
Sbjct: 155 SKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
>AY437083-1|AAR87842.1| 452|Homo sapiens glycine receptor alpha2
subunit A protein.
Length = 452
Score = 32.7 bits (71), Expect = 1.7
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +2
Query: 413 SNNGSVSWIKRLDISTPISMQXDNWPNDMQTCXFQXXVLGCPNXD--XXGFGDGP 571
S NG V + RL ++ M N+P D+QTC Q G D DGP
Sbjct: 155 SKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
>AF053495-1|AAC35290.1| 452|Homo sapiens glycine receptor alpha 2
subunit protein.
Length = 452
Score = 32.7 bits (71), Expect = 1.7
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 2/55 (3%)
Frame = +2
Query: 413 SNNGSVSWIKRLDISTPISMQXDNWPNDMQTCXFQXXVLGCPNXD--XXGFGDGP 571
S NG V + RL ++ M N+P D+QTC Q G D DGP
Sbjct: 155 SKNGKVLYSIRLTLTLSCPMDLKNFPMDVQTCTMQLESFGYTMNDLIFEWLSDGP 209
>BC111802-1|AAI11803.1| 465|Homo sapiens CHRNG protein protein.
Length = 465
Score = 32.3 bits (70), Expect = 2.2
Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
Frame = +3
Query: 54 PFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKI--VVNLTLHLRHANI---R 218
P LL +A + ++ L+ YD P + VVN++L L N+
Sbjct: 7 PLLLLLLLAVCLGAQGRNQEERLLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLN 66
Query: 219 ESESTVRILADLQMNWIDKRLSWN 290
E E + ++M W D RL W+
Sbjct: 67 EREEALTTNVWIEMQWCDYRLRWD 90
>U02619-1|AAA17985.1| 2109|Homo sapiens TFIIIC Box B-binding subunit
protein.
Length = 2109
Score = 31.9 bits (69), Expect = 2.9
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 306 LQHLAGVLG--TLVEA*RGTAKRGCNHRRGLRSPRPXYLITAP 428
L+H GVL ++E +G GC +R LR PRP L + P
Sbjct: 2022 LRHYQGVLQPVAVLELLQGLESLGCIRKRWLRKPRPVSLFSTP 2064
>BC052642-1|AAH52642.1| 136|Homo sapiens GTF3C1 protein protein.
Length = 136
Score = 31.9 bits (69), Expect = 2.9
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 306 LQHLAGVLG--TLVEA*RGTAKRGCNHRRGLRSPRPXYLITAP 428
L+H GVL ++E +G GC +R LR PRP L + P
Sbjct: 49 LRHYQGVLQPVAVLELLQGLESLGCIRKRWLRKPRPVSLFSTP 91
>BC044857-1|AAH44857.1| 978|Homo sapiens GTF3C1 protein protein.
Length = 978
Score = 31.9 bits (69), Expect = 2.9
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 306 LQHLAGVLG--TLVEA*RGTAKRGCNHRRGLRSPRPXYLITAP 428
L+H GVL ++E +G GC +R LR PRP L + P
Sbjct: 891 LRHYQGVLQPVAVLELLQGLESLGCIRKRWLRKPRPVSLFSTP 933
>AC002303-1|AAB67637.1| 1857|Homo sapiens Transcription factor
(TFIIIC) alpha chain, partial protein.
Length = 1857
Score = 31.9 bits (69), Expect = 2.9
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +3
Query: 306 LQHLAGVLG--TLVEA*RGTAKRGCNHRRGLRSPRPXYLITAP 428
L+H GVL ++E +G GC +R LR PRP L + P
Sbjct: 1770 LRHYQGVLQPVAVLELLQGLESLGCIRKRWLRKPRPVSLFSTP 1812
>X52009-1|CAA36258.1| 449|Homo sapiens inhibitory glycine receptor
protein.
Length = 449
Score = 31.5 bits (68), Expect = 3.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 413 SNNGSVSWIKRLDISTPISMQXDNWPNDMQTCXFQXXVLG 532
S NG+V + R+ ++ M N+P D+QTC Q G
Sbjct: 149 SRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFG 188
>BC114967-1|AAI14968.1| 366|Homo sapiens GLRA1 protein protein.
Length = 366
Score = 31.5 bits (68), Expect = 3.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 413 SNNGSVSWIKRLDISTPISMQXDNWPNDMQTCXFQXXVLG 532
S NG+V + R+ ++ M N+P D+QTC Q G
Sbjct: 66 SRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFG 105
>BC114947-1|AAI14948.1| 457|Homo sapiens GLRA1 protein protein.
Length = 457
Score = 31.5 bits (68), Expect = 3.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 413 SNNGSVSWIKRLDISTPISMQXDNWPNDMQTCXFQXXVLG 532
S NG+V + R+ ++ M N+P D+QTC Q G
Sbjct: 149 SRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFG 188
>BC074980-1|AAH74980.1| 449|Homo sapiens glycine receptor, alpha 1
(startle disease/hyperekplexia) protein.
Length = 449
Score = 31.5 bits (68), Expect = 3.8
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +2
Query: 413 SNNGSVSWIKRLDISTPISMQXDNWPNDMQTCXFQXXVLG 532
S NG+V + R+ ++ M N+P D+QTC Q G
Sbjct: 149 SRNGNVLYSIRITLTLACPMDLKNFPMDVQTCIMQLESFG 188
>U93917-1|AAC39917.1| 449|Homo sapiens glycine receptor alpha 3
subunit protein.
Length = 449
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 419 NGSVSWIKRLDISTPISMQXDNWPNDMQTCXFQXXVLG 532
NG+V + RL ++ M N+P D+QTC Q G
Sbjct: 156 NGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFG 193
>BC036086-1|AAH36086.1| 464|Homo sapiens glycine receptor, alpha 3
protein.
Length = 464
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 419 NGSVSWIKRLDISTPISMQXDNWPNDMQTCXFQXXVLG 532
NG+V + RL ++ M N+P D+QTC Q G
Sbjct: 156 NGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFG 193
>AK122582-1|BAC56923.1| 1383|Homo sapiens FLJ00269 protein protein.
Length = 1383
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -1
Query: 409 HGRGERSPRRWLQPRLAVPRQASTSVPRTPAKCCSPIPPA 290
HG + SP W Q + + P + P P +CCS P A
Sbjct: 256 HGGRDCSPTCWEQGKCSGPAEQEKRGPSFPKECCSQGPTA 295
>AF017724-1|AAC39919.1| 465|Homo sapiens glycine receptor alpha 3
subunit protein.
Length = 465
Score = 30.7 bits (66), Expect = 6.7
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 419 NGSVSWIKRLDISTPISMQXDNWPNDMQTCXFQXXVLG 532
NG+V + RL ++ M N+P D+QTC Q G
Sbjct: 156 NGNVLYSIRLTLTLSCPMDLKNFPMDVQTCIMQLESFG 193
>Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for
muscle acetylcholine receptor alpha-subunit. ).
Length = 457
Score = 30.3 bits (65), Expect = 8.8
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Frame = +3
Query: 54 PFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA---NIR 218
P LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 5 PLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVD 64
Query: 219 ESESTVRILADLQMNWIDKRLSWNAGGMG 305
E V L+ W+D L WN G
Sbjct: 65 EVNQIVTTNVRLKQQWVDYNLKWNPDDYG 93
>X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor
protein.
Length = 457
Score = 30.3 bits (65), Expect = 8.8
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Frame = +3
Query: 54 PFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA---NIR 218
P LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 5 PLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVD 64
Query: 219 ESESTVRILADLQMNWIDKRLSWNAGGMG 305
E V L+ W+D L WN G
Sbjct: 65 EVNQIVTTNVRLKQQWVDYNLKWNPDDYG 93
>X01715-1|CAA25861.1| 520|Homo sapiens acetylcholine receptor gamma
chain precursor protein.
Length = 520
Score = 30.3 bits (65), Expect = 8.8
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
Frame = +3
Query: 42 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKI--VVNLTLHLRHANI 215
++LL L C + N L+ D L+ YD P + VVN++L L N+
Sbjct: 8 LLLLLLLAVCLGGTQRNLRNQEE-RLLAD-LMQNYDPNLRPAERDSDVVNVSLKLTLTNL 65
Query: 216 ---RESESTVRILADLQMNWIDKRLSWN 290
E E + ++M W D RL W+
Sbjct: 66 ISLNEREEALTTNVWIEMQWCDYRLRWD 93
>S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine
receptor alpha subunit|AChR protein.
Length = 457
Score = 30.3 bits (65), Expect = 8.8
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Frame = +3
Query: 54 PFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA---NIR 218
P LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 5 PLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVD 64
Query: 219 ESESTVRILADLQMNWIDKRLSWNAGGMG 305
E V L+ W+D L WN G
Sbjct: 65 EVNQIVTTNVRLKQQWVDYNLKWNPDDYG 93
>BC023532-1|AAH23532.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 30.3 bits (65), Expect = 8.8
Identities = 21/62 (33%), Positives = 22/62 (35%), Gaps = 3/62 (4%)
Frame = -3
Query: 767 GEP-GXXPRPXPXSPXXLRXGXXX--RGXSDPXXIPAXPPGXGAGXXXGXDPXXVXGXPX 597
G P G P P P +P LR RG P PPG G G P G P
Sbjct: 425 GPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPP 484
Query: 596 XG 591
G
Sbjct: 485 RG 486
>BC021908-1|AAH21908.1| 485|Homo sapiens zinc finger, DHHC-type
containing 1 protein.
Length = 485
Score = 30.3 bits (65), Expect = 8.8
Identities = 20/48 (41%), Positives = 22/48 (45%)
Frame = -1
Query: 433 GDGAVIRXHGRGERSPRRWLQPRLAVPRQASTSVPRTPAKCCSPIPPA 290
G GA I+ R RR L P A P A +PRTPA C PA
Sbjct: 393 GRGACIKCERLRPRIRRRGLGPPAAAP--ARRRIPRTPALCTPLALPA 438
>BC016441-1|AAH16441.2| 400|Homo sapiens WBP11 protein protein.
Length = 400
Score = 30.3 bits (65), Expect = 8.8
Identities = 21/62 (33%), Positives = 22/62 (35%), Gaps = 3/62 (4%)
Frame = -3
Query: 767 GEP-GXXPRPXPXSPXXLRXGXXX--RGXSDPXXIPAXPPGXGAGXXXGXDPXXVXGXPX 597
G P G P P P +P LR RG P PPG G G P G P
Sbjct: 184 GPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPP 243
Query: 596 XG 591
G
Sbjct: 244 RG 245
>BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein.
Length = 269
Score = 30.3 bits (65), Expect = 8.8
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Frame = +3
Query: 54 PFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA---NIR 218
P LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 5 PLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVD 64
Query: 219 ESESTVRILADLQMNWIDKRLSWNAGGMG 305
E V L+ W+D L WN G
Sbjct: 65 EVNQIVTTNVRLKQQWVDYNLKWNPDDYG 93
>BC001621-1|AAH01621.1| 641|Homo sapiens WW domain binding protein
11 protein.
Length = 641
Score = 30.3 bits (65), Expect = 8.8
Identities = 21/62 (33%), Positives = 22/62 (35%), Gaps = 3/62 (4%)
Frame = -3
Query: 767 GEP-GXXPRPXPXSPXXLRXGXXX--RGXSDPXXIPAXPPGXGAGXXXGXDPXXVXGXPX 597
G P G P P P +P LR RG P PPG G G P G P
Sbjct: 425 GPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPP 484
Query: 596 XG 591
G
Sbjct: 485 RG 486
>AF118023-1|AAD30425.1| 641|Homo sapiens SH3 domain-binding protein
SNP70 protein.
Length = 641
Score = 30.3 bits (65), Expect = 8.8
Identities = 21/62 (33%), Positives = 22/62 (35%), Gaps = 3/62 (4%)
Frame = -3
Query: 767 GEP-GXXPRPXPXSPXXLRXGXXX--RGXSDPXXIPAXPPGXGAGXXXGXDPXXVXGXPX 597
G P G P P P +P LR RG P PPG G G P G P
Sbjct: 425 GPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPP 484
Query: 596 XG 591
G
Sbjct: 485 RG 486
>AC092165-3|AAY24103.1| 520|Homo sapiens unknown protein.
Length = 520
Score = 30.3 bits (65), Expect = 8.8
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
Frame = +3
Query: 42 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKI--VVNLTLHLRHANI 215
++LL L C + N L+ D L+ YD P + VVN++L L N+
Sbjct: 8 LLLLLLLAVCLGGTQRNLRNQEE-RLLAD-LMQNYDPNLRPAERDSDVVNVSLKLTLTNL 65
Query: 216 ---RESESTVRILADLQMNWIDKRLSWN 290
E E + ++M W D RL W+
Sbjct: 66 ISLNEREEALTTNVWIEMQWCDYRLRWD 93
>AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein.
Length = 457
Score = 30.3 bits (65), Expect = 8.8
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 5/89 (5%)
Frame = +3
Query: 54 PFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA---NIR 218
P LL ++ SA + + ++ L Y P D + VV +T+ L+ N+
Sbjct: 5 PLLLLFSLCSAGLVLGSEHETRLVAKLFKDYSSVVRPVEDHRQVVEVTVGLQLIQLINVD 64
Query: 219 ESESTVRILADLQMNWIDKRLSWNAGGMG 305
E V L+ W+D L WN G
Sbjct: 65 EVNQIVTTNVRLKQQWVDYNLKWNPDDYG 93
>AB029309-1|BAA88410.1| 641|Homo sapiens Npw38-binding protein
NpwBP protein.
Length = 641
Score = 30.3 bits (65), Expect = 8.8
Identities = 21/62 (33%), Positives = 22/62 (35%), Gaps = 3/62 (4%)
Frame = -3
Query: 767 GEP-GXXPRPXPXSPXXLRXGXXX--RGXSDPXXIPAXPPGXGAGXXXGXDPXXVXGXPX 597
G P G P P P +P LR RG P PPG G G P G P
Sbjct: 425 GPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPGPPP 484
Query: 596 XG 591
G
Sbjct: 485 RG 486
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,488,815
Number of Sequences: 237096
Number of extensions: 2315390
Number of successful extensions: 6215
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 5682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6199
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10315140830
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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