Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_I20
(826 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 33 0.002
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 33 0.004
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 33 0.004
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 30 0.030
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 28 0.12
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 27 0.16
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 27 0.16
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 27 0.16
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 27 0.21
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 27 0.28
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 26 0.37
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 25 0.64
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 25 0.85
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 25 0.85
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.1
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.1
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.1
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.1
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.1
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.1
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 25 1.1
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 25 1.1
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 24 1.5
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 2.6
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 23 2.6
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 3.4
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 22 7.9
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 22 7.9
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 33.5 bits (73), Expect = 0.002
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 93 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 257
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 258 MNWIDKRLSWNA 293
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 32.7 bits (71), Expect = 0.004
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 7/99 (7%)
Frame = +3
Query: 42 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYDR------ESPPDSKIVVNLTLHLR 203
++LL FLL + + + ++D++L YD E+ D +V + L +R
Sbjct: 9 LVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAIVRVNLFVR 68
Query: 204 H-ANIRESESTVRILADLQMNWIDKRLSWNAGGMGLQHL 317
A I + + + + W+D+RL +N G L++L
Sbjct: 69 SIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107
Score = 23.8 bits (49), Expect = 2.0
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = +2
Query: 419 NGSVSWIKRLDISTPISMQXDNWPNDMQTCXFQXXVLGCPNXD 547
NGSV + R+ ++ M +P D Q C + G D
Sbjct: 145 NGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDD 187
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 32.7 bits (71), Expect = 0.004
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 99 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 266
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 267 IDKRLSWNAG 296
+D+RL++ G
Sbjct: 62 VDRRLAFQGG 71
Score = 28.3 bits (60), Expect = 0.091
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = +2
Query: 419 NGSVSWIKRLDISTPISMQXDNWPNDMQTCXFQXXVLGCPNXD 547
+G V + RL I M +N+P D Q C Q G D
Sbjct: 115 DGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGSFGYTKRD 157
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 29.9 bits (64), Expect = 0.030
Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
Frame = +3
Query: 42 IILLPFLLTCAIASAAECENATSLSLMIDSLLATYDR------ESPPDSKIVVNLTLHLR 203
++LL FLL + + + ++D++L YD E+ D VV + + +R
Sbjct: 9 LVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAVVRVNIFVR 68
Query: 204 H-ANIRESESTVRILADLQMNWIDKRLSWNAGGMGLQHL 317
+ I + + + W+D+RL +N G L++L
Sbjct: 69 SISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107
Score = 23.8 bits (49), Expect = 2.0
Identities = 12/43 (27%), Positives = 18/43 (41%)
Frame = +2
Query: 419 NGSVSWIKRLDISTPISMQXDNWPNDMQTCXFQXXVLGCPNXD 547
NGSV + R+ ++ M +P D Q C + G D
Sbjct: 145 NGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDD 187
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 27.9 bits (59), Expect = 0.12
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 304 GCSTWLVSSERLWRPDVVLLNAA 372
G T V SE +W PD+VL N A
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA 113
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.5 bits (58), Expect = 0.16
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAA 372
V S+ +WRPD+VL N A
Sbjct: 105 VPSDHIWRPDIVLYNNA 121
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.5 bits (58), Expect = 0.16
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAA 372
V S+ +WRPD+VL N A
Sbjct: 105 VPSDHIWRPDIVLYNNA 121
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 27.5 bits (58), Expect = 0.16
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAA 372
V S+ +WRPD+VL N A
Sbjct: 101 VPSDHIWRPDIVLYNNA 117
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 27.1 bits (57), Expect = 0.21
Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = +1
Query: 298 EWGCSTWL-VSSERLWRPDVVLLNAA 372
E+G T L V SE +W PD+VL N A
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNA 113
Score = 22.6 bits (46), Expect = 4.5
Identities = 10/40 (25%), Positives = 16/40 (40%)
Frame = +2
Query: 389 TTLSAPVXSNNGSVSWIKRLDISTPISMQXDNWPNDMQTC 508
TT++ + G V W + + +P D QTC
Sbjct: 120 TTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTC 159
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 26.6 bits (56), Expect = 0.28
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +2
Query: 413 SNNGSVSWIKRLDISTPISMQXDNWPNDMQTC 508
S +G + + RL I M+ N+P D Q+C
Sbjct: 145 SQDGDILYSMRLTIKAKCPMELRNFPMDRQSC 176
Score = 22.2 bits (45), Expect = 6.0
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +1
Query: 331 ERLWRPDVVLLN 366
ER+WRPD N
Sbjct: 115 ERIWRPDTYFYN 126
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 26.2 bits (55), Expect = 0.37
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +1
Query: 304 GCSTWLVSSERLWRPDVVLLNAA 372
G V SE +W PD+VL N A
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA 126
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 25.4 bits (53), Expect = 0.64
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAA 372
+ RLW+PDV++ N+A
Sbjct: 100 IPPHRLWKPDVLMYNSA 116
Score = 21.8 bits (44), Expect = 7.9
Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Frame = +3
Query: 72 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NIRESESTV 236
A+A++ + +++ LL TY+ E P ++ +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 237 RILADLQMNWIDKRLSWNAGGMG 305
L++ W D + WN G
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYG 93
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 25.0 bits (52), Expect = 0.85
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 39 YIILLPFLLTCAIAS-AAECENATSLSLMIDSLLAT 143
Y ILL L+TC I S + C T S + D ++AT
Sbjct: 3 YSILLSLLITCLICSPSVHC--GTRPSFVSDEMIAT 36
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 25.0 bits (52), Expect = 0.85
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +1
Query: 331 ERLWRPDVVLLNAAATTAGDYALR 402
+++W+PD+VL N A G+Y +R
Sbjct: 106 DKVWKPDIVLFNNA---DGNYEVR 126
Score = 23.8 bits (49), Expect = 2.0
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 171 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNA---GGMGLQHL 317
K+ VN L ++ N+ E ++ L+ W D +L W+ GG+G+ L
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRL 103
Score = 23.0 bits (47), Expect = 3.4
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = +2
Query: 419 NGSVSWIKRLDISTPISMQXDNWPNDMQTC 508
NG V W+ + ++ +P D QTC
Sbjct: 136 NGDVLWVPPAIYQSSCTIDVTYFPFDQQTC 165
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.1
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAA 372
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 210 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 305
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.1
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAA 372
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 210 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 305
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.1
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAA 372
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 210 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 305
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.1
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAA 372
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 210 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 305
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.1
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAA 372
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 210 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 305
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.1
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAA 372
++ +LW+PD+++ N+A
Sbjct: 63 ITPNKLWKPDILMYNSA 79
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 210 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 305
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 24.6 bits (51), Expect = 1.1
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +3
Query: 120 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 284
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 285 WNAGGMG 305
WN G
Sbjct: 118 WNESEYG 124
Score = 24.6 bits (51), Expect = 1.1
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAA 372
++ +LW+PD+++ N+A
Sbjct: 131 ITPNKLWKPDILMYNSA 147
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 24.6 bits (51), Expect = 1.1
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +3
Query: 120 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 284
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 285 WNAGGMG 305
WN G
Sbjct: 118 WNESEYG 124
Score = 24.6 bits (51), Expect = 1.1
Identities = 6/17 (35%), Positives = 14/17 (82%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAA 372
++ +LW+PD+++ N+A
Sbjct: 131 ITPNKLWKPDILMYNSA 147
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1
Query: 322 VSSERLWRPDVVLLNAA 372
V R+WRPD +L N A
Sbjct: 82 VPYNRVWRPDTILYNNA 98
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.4 bits (48), Expect = 2.6
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +3
Query: 99 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 266
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 267 IDKRLSW 287
D RL++
Sbjct: 68 TDPRLAF 74
Score = 23.4 bits (48), Expect = 2.6
Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +2
Query: 416 NNGSVSWIKRLDISTPISMQXDNWPNDMQTCXFQXXVLGCPNXD-XXGFGDGP 571
++GS++ RL I+ M +P D Q C + G D + +GP
Sbjct: 122 HSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 174
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 23.4 bits (48), Expect = 2.6
Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +2
Query: 416 NNGSVSWIKRLDISTPISMQXDNWPNDMQTCXFQXXVLGCPNXD-XXGFGDGP 571
++GS++ RL I+ M +P D Q C + G D + +GP
Sbjct: 61 HSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFGYTMRDIRYKWNEGP 113
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.0 bits (47), Expect = 3.4
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = +2
Query: 416 NNGSVSWIKRLDISTPISMQXDNWPNDMQTCXFQXXVLG 532
++GS++ RL I+ M +P D Q C + G
Sbjct: 122 HSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIESFG 160
Score = 22.2 bits (45), Expect = 6.0
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +3
Query: 99 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 266
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 267 IDKRLSW 287
D RL++
Sbjct: 68 TDPRLAF 74
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.8 bits (44), Expect = 7.9
Identities = 11/40 (27%), Positives = 17/40 (42%)
Frame = +2
Query: 413 SNNGSVSWIKRLDISTPISMQXDNWPNDMQTCXFQXXVLG 532
S +GSV++ R + M +P D Q C + G
Sbjct: 144 SGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYG 183
Score = 21.8 bits (44), Expect = 7.9
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 389 TTLSAPVXSNNGSVSWIKRLDI 454
TT+S V S+ +S++K +DI
Sbjct: 285 TTISTGVRSSLPRISYVKAIDI 306
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 21.8 bits (44), Expect = 7.9
Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +3
Query: 153 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGGMGLQHLAGVL- 329
E + ++N L + + + ++ + D + N + + S AGG+ + AG++
Sbjct: 233 EGDDQQRAIINTLLSISASCVIAFATSALVSKDSKFNMVHIQNSTLAGGVAIGTAAGMMC 292
Query: 330 ---GTLV 341
GTL+
Sbjct: 293 QPVGTLI 299
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,047
Number of Sequences: 438
Number of extensions: 4263
Number of successful extensions: 54
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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