Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_I19
(812 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated io... 38 0.006
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 38 0.011
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 38 0.011
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 38 0.011
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 38 0.011
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 38 0.011
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 38 0.011
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 37 0.015
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 37 0.015
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 36 0.026
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 36 0.046
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 35 0.060
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 35 0.060
Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 33 0.18
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 33 0.18
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 33 0.18
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 33 0.18
AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine... 33 0.18
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 33 0.18
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 33 0.24
X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit ... 33 0.24
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 33 0.24
U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine r... 33 0.24
AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated... 33 0.24
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 33 0.24
U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine r... 33 0.32
AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine... 33 0.32
AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical ... 33 0.32
Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical pr... 32 0.42
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 32 0.42
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 32 0.42
U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine r... 32 0.56
U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine re... 32 0.56
Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical pr... 31 0.74
X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha nicot... 31 0.74
X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic acety... 31 0.74
U64843-16|AAX55689.1| 442|Caenorhabditis elegans Modulation of ... 31 0.74
U64843-15|AAF98227.2| 489|Caenorhabditis elegans Modulation of ... 31 0.74
U64843-14|AAM45353.1| 475|Caenorhabditis elegans Modulation of ... 31 0.74
AF303088-1|AAG36975.1| 489|Caenorhabditis elegans serotonin-gat... 31 0.74
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 31 0.74
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 31 0.74
Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic acety... 31 0.98
U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine r... 31 0.98
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 31 1.3
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 30 1.7
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 30 2.3
X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit... 29 3.0
U40948-4|AAA81730.2| 517|Caenorhabditis elegans Hypothetical pr... 29 3.0
AY849796-1|AAW34234.1| 517|Caenorhabditis elegans acetylcholine... 29 3.0
AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine... 29 3.0
AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine... 29 3.0
AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine... 29 3.0
Z93397-1|CAB07719.3| 550|Caenorhabditis elegans Hypothetical pr... 29 4.0
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical pr... 29 5.2
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 29 5.2
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 29 5.2
AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine... 29 5.2
AF022985-15|AAB69969.2| 435|Caenorhabditis elegans Hypothetical... 29 5.2
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 29 5.2
Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical pr... 28 6.9
U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine r... 28 6.9
U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine r... 28 6.9
AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine... 28 6.9
AL132862-1|CAB60529.2| 434|Caenorhabditis elegans Hypothetical ... 28 6.9
AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic ace... 28 6.9
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 28 9.1
AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical ... 28 9.1
>U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated ion
channel protein 3 protein.
Length = 355
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = +3
Query: 60 TCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRI 236
T +A +E +S S + LL +++ SPPD ++ ++ + L H I E +++
Sbjct: 56 TVGVAEFSEQYQGSS-SRLTRHLLEKHNKCSPPDGRVDISHNIELVHIIGINELNQNMQV 114
Query: 237 LADLQMNWIDKRLSWNAGGM-GLQH 308
L + W D LSW G++H
Sbjct: 115 LVYIVQQWTDASLSWKVEEFRGIKH 139
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 114 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 290
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 291 GMG 299
G
Sbjct: 130 LFG 132
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 114 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 290
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 291 GMG 299
G
Sbjct: 130 LFG 132
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 114 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 290
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 291 GMG 299
G
Sbjct: 130 LFG 132
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 114 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 290
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 291 GMG 299
G
Sbjct: 130 LFG 132
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 114 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 290
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 291 GMG 299
G
Sbjct: 130 LFG 132
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 37.5 bits (83), Expect = 0.011
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 114 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 290
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 291 GMG 299
G
Sbjct: 130 LFG 132
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 37.1 bits (82), Expect = 0.015
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +1
Query: 316 VSSERLWRPDVVLL-NAAATTAGDYXLRARVSNNGSVSWIKRLDISTPISMXXHXXPTDM 492
V S+R+W PD+VL NA + V ++G V+W+ + + P D
Sbjct: 137 VPSDRVWLPDIVLFNNADGNYEVSFKSNVFVDHHGDVTWVPPAMFKSSCRIDVEWFPFDE 196
Query: 493 XTCTXXSGS 519
CT GS
Sbjct: 197 QCCTLVFGS 205
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 37.1 bits (82), Expect = 0.015
Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 1/69 (1%)
Frame = +1
Query: 316 VSSERLWRPDVVLL-NAAATTAGDYXLRARVSNNGSVSWIKRLDISTPISMXXHXXPTDM 492
V S+R+W PD+VL NA + V ++G V+W+ + + P D
Sbjct: 137 VPSDRVWLPDIVLFNNADGNYEVSFKSNVFVDHHGDVTWVPPAMFKSSCRIDVEWFPFDE 196
Query: 493 XTCTXXSGS 519
CT GS
Sbjct: 197 QCCTLVFGS 205
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 36.3 bits (80), Expect = 0.026
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 138 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 287
YD E+P + L +L+ ++E + + ++ ++ W D RLSWNA
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNA 112
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 35.5 bits (78), Expect = 0.046
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Frame = +3
Query: 117 IDSLLATYDRESP----PDSKIVVNLTL---HLRHANIRESESTVRILADLQMNWIDKRL 275
+ + A +D P PD+ N TL +L+ + E E V ++ +L W D RL
Sbjct: 50 VSPVYAWFDTSKPLGYDPDAPQRYNYTLFLYNLKLIQVNEPEEQVSVVLELMEYWYDPRL 109
Query: 276 SWNA 287
SWNA
Sbjct: 110 SWNA 113
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 35.1 bits (77), Expect = 0.060
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +1
Query: 298 GCSTWLVSSERLWRPDVVLLNAAATTAGDYXL----RARVSNNGSVSWIKRLDISTPISM 465
G V S+ +W PDVVL N A G+Y + +A+++ NG+V W + +
Sbjct: 97 GVEVLYVPSDTIWLPDVVLYNNA---DGNYQVTIMTKAKLTYNGTVEWAPPAIYKSMCQI 153
Query: 466 XXHXXPTDMXTCTXXSGS 519
P D C GS
Sbjct: 154 DVEFFPFDRQQCEMKFGS 171
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 35.1 bits (77), Expect = 0.060
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +1
Query: 298 GCSTWLVSSERLWRPDVVLLNAAATTAGDYXL----RARVSNNGSVSWIKRLDISTPISM 465
G V S+ +W PDVVL N A G+Y + +A+++ NG+V W + +
Sbjct: 97 GVEVLYVPSDTIWLPDVVLYNNA---DGNYQVTIMTKAKLTYNGTVEWAPPAIYKSMCQI 153
Query: 466 XXHXXPTDMXTCTXXSGS 519
P D C GS
Sbjct: 154 DVEFFPFDRQQCEMKFGS 171
>Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical
protein C31H5.3 protein.
Length = 554
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +1
Query: 331 LWRPDVVLLNAAATTAGD-YXLRARVSNNGSVSWIKRLDISTPISMXXHXXPTDMXTCTX 507
+W+PDV+L N+ + + A V G+V+WI I + ++ P D CT
Sbjct: 106 IWKPDVLLYNSVDQQFDSTWPVNAVVLYTGNVTWIPPAIIRSSCAIDIAYFPFDTQHCTM 165
Query: 508 XSGS 519
GS
Sbjct: 166 KFGS 169
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 180 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 287
L +L+ ++E E V ++ +L W D RLSWN+
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNS 114
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Frame = +3
Query: 114 MIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 278
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 279 W---NAGGMGLQHL 311
W N GG+ + ++
Sbjct: 90 WDPVNYGGVNVLYV 103
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/75 (25%), Positives = 28/75 (37%), Gaps = 1/75 (1%)
Frame = +1
Query: 298 GCSTWLVSSERLWRPDVVLLNAAATTAG-DYXLRARVSNNGSVSWIKRLDISTPISMXXH 474
G + V E +W PD+VL N A + +A + G V+W + +
Sbjct: 97 GVNVLYVPYEMIWVPDIVLYNNADSNYNITISTKATLHYTGEVTWEPPAIFKSMCQIDVR 156
Query: 475 XXPTDMXTCTXXSGS 519
P D C GS
Sbjct: 157 WFPFDEQQCHLKFGS 171
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Frame = +3
Query: 114 MIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 278
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 279 W---NAGGMGLQHL 311
W N GG+ + ++
Sbjct: 90 WDPVNYGGVNVLYV 103
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/75 (25%), Positives = 28/75 (37%), Gaps = 1/75 (1%)
Frame = +1
Query: 298 GCSTWLVSSERLWRPDVVLLNAAATTAG-DYXLRARVSNNGSVSWIKRLDISTPISMXXH 474
G + V E +W PD+VL N A + +A + G V+W + +
Sbjct: 97 GVNVLYVPYEMIWVPDIVLYNNADSNYNITISTKATLHYTGEVTWEPPAIFKSMCQIDVR 156
Query: 475 XXPTDMXTCTXXSGS 519
P D C GS
Sbjct: 157 WFPFDEQQCHLKFGS 171
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 8/74 (10%)
Frame = +3
Query: 114 MIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 278
+ D L+ Y+R + P+ + + L L L ++ E + + L+ WID++LS
Sbjct: 30 LYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLS 89
Query: 279 W---NAGGMGLQHL 311
W N GG+ + ++
Sbjct: 90 WDPVNYGGVNVLYV 103
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/75 (25%), Positives = 28/75 (37%), Gaps = 1/75 (1%)
Frame = +1
Query: 298 GCSTWLVSSERLWRPDVVLLNAAATTAG-DYXLRARVSNNGSVSWIKRLDISTPISMXXH 474
G + V E +W PD+VL N A + +A + G V+W + +
Sbjct: 97 GVNVLYVPYEMIWVPDIVLYNNADSNYNITISTKATLHYTGEVTWEPPAIFKSMCQIDVR 156
Query: 475 XXPTDMXTCTXXSGS 519
P D C GS
Sbjct: 157 WFPFDEQQCHLKFGS 171
>AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine
receptor (63.2 kD)(acr-19) protein.
Length = 554
Score = 33.5 bits (73), Expect = 0.18
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +1
Query: 331 LWRPDVVLLNAAATTAGD-YXLRARVSNNGSVSWIKRLDISTPISMXXHXXPTDMXTCTX 507
+W+PDV+L N+ + + A V G+V+WI I + ++ P D CT
Sbjct: 106 IWKPDVLLYNSVDQQFDSTWPVNAVVLYTGNVTWIPPAIIRSSCAIDIAYFPFDTQHCTM 165
Query: 508 XSGS 519
GS
Sbjct: 166 KFGS 169
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 33.5 bits (73), Expect = 0.18
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Frame = +3
Query: 114 MIDSLLATYDRESPP--DSK--IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 278
+I+ L++ Y RE P DS +VV+L + L+ N+ E E + + A L+ W D+ L
Sbjct: 25 LINDLMSGYVREERPTLDSSKPVVVSLGVFLQQIINLSEKEEQLEVNAWLKFQWRDENLR 84
Query: 279 W 281
W
Sbjct: 85 W 85
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +1
Query: 316 VSSERLWRPDVVLL-NAAATTAGDYXLRARVSNNGSVSWIKRLDISTPISMXXHXXPTDM 492
VS +++W PD+VL NA + +++ G + W+ + + P D
Sbjct: 107 VSPDKVWLPDIVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDVEFFPFDE 166
Query: 493 XTCTXXSGS 519
CT GS
Sbjct: 167 QVCTLVFGS 175
>X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 493
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +1
Query: 316 VSSERLWRPDVVLL-NAAATTAGDYXLRARVSNNGSVSWIKRLDISTPISMXXHXXPTDM 492
VS +++W PD+VL NA + +++ G + W+ + + P D
Sbjct: 107 VSPDKVWLPDIVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDVEFFPFDE 166
Query: 493 XTCTXXSGS 519
CT GS
Sbjct: 167 QVCTLVFGS 175
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 33.1 bits (72), Expect = 0.24
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +1
Query: 316 VSSERLWRPDVVLL-NAAATTAGDYXLRARVSNNGSVSWIKRLDISTPISMXXHXXPTDM 492
VS +++W PD+VL NA + +++ G + W+ + + P D
Sbjct: 107 VSPDKVWLPDIVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDVEFFPFDE 166
Query: 493 XTCTXXSGS 519
CT GS
Sbjct: 167 QVCTLVFGS 175
>U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine
receptor protein 10 protein.
Length = 510
Score = 33.1 bits (72), Expect = 0.24
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = +1
Query: 328 RLWRPDVVLLNAAATT-AGDYXLRARVSNNGSVSWIKRLDISTPISMXXHXXPTDMXTCT 504
++WRPD++L N+A+ + V N G V+WI M P D C
Sbjct: 48 QIWRPDILLYNSASEDFDSSFKSNEVVYNTGEVNWIPPGIFRASCKMDITYFPFDDQVCY 107
Query: 505 XXSGS 519
GS
Sbjct: 108 LKFGS 112
>AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated
ion channel protein 10 protein.
Length = 493
Score = 33.1 bits (72), Expect = 0.24
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Frame = +3
Query: 78 AAECENATSL----SLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA-NIRESESTVRI 236
A CEN +L S +++ + YDR P ++VN+T+ L ++E++
Sbjct: 57 ALNCENFRTLDNETSAILNDIFVGYDRRVLPFVQGPVLVNMTIVLGILIELKENQQLAAY 116
Query: 237 LADLQMNWIDKRLSWN 284
+ W D RLSW+
Sbjct: 117 VISHTQRWYDGRLSWD 132
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 33.1 bits (72), Expect = 0.24
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 153 PPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGGM-GLQHL 311
PP +I + L++ ++ + E E L D + +W D RLSW+ G+ H+
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYGGINHI 131
>U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine
receptor protein 22 protein.
Length = 434
Score = 32.7 bits (71), Expect = 0.32
Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 3/94 (3%)
Frame = +1
Query: 292 EW-GCSTWLVSSERLWRPDVVLLNAAATT--AGDYXLRARVSNNGSVSWIKRLDISTPIS 462
EW G ++ ++W PD + N T ++ R R V + K +D++ P+S
Sbjct: 103 EWNGIERIIIPKSQIWIPDGYIFNTVEETEPLENHNARVRYDGRVEVDFNKLVDLTCPMS 162
Query: 463 MXXHXXPTDMXTCTXXSGSXDAQXXTXWIPXXDT 564
+ P D+ C GS Q DT
Sbjct: 163 VL--SFPFDVQLCALQFGSWSYQAHAISFNVLDT 194
>AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine
receptor (51.1 kD)(acr-22) protein.
Length = 434
Score = 32.7 bits (71), Expect = 0.32
Identities = 23/94 (24%), Positives = 37/94 (39%), Gaps = 3/94 (3%)
Frame = +1
Query: 292 EW-GCSTWLVSSERLWRPDVVLLNAAATT--AGDYXLRARVSNNGSVSWIKRLDISTPIS 462
EW G ++ ++W PD + N T ++ R R V + K +D++ P+S
Sbjct: 103 EWNGIERIIIPKSQIWIPDGYIFNTVEETEPLENHNARVRYDGRVEVDFNKLVDLTCPMS 162
Query: 463 MXXHXXPTDMXTCTXXSGSXDAQXXTXWIPXXDT 564
+ P D+ C GS Q DT
Sbjct: 163 VL--SFPFDVQLCALQFGSWSYQAHAISFNVLDT 194
>AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical
protein Y48B6A.4 protein.
Length = 474
Score = 32.7 bits (71), Expect = 0.32
Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 292 EWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYXLRARVSNNGSVSWIKRLDISTPISM 465
E+G T L + LW+PD++L N+A + + VS+NG V + +S S+
Sbjct: 92 EYGNITTLQIPHGTLWKPDILLFNSANEHFDASFPVHMVVSSNGDVLFAPPGIVSFSCSL 151
Query: 466 XXHXXPTDMXTCTXXSGS 519
P D C GS
Sbjct: 152 SMTWFPYDQQVCYLKFGS 169
>Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical
protein T05C12.2 protein.
Length = 500
Score = 32.3 bits (70), Expect = 0.42
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +1
Query: 319 SSERLWRPDVVLLNAAATT-AGDYXLRARVSNNGSVSWIKRLDISTPISMXXHXXPTDMX 495
+S +LWRPDV+L N+ + + Y R VS+NG V + P D
Sbjct: 103 ASFKLWRPDVLLFNSVSESFDSTYSSRFIVSSNGDVQQNPPGIFRFVCQIDVTYYPFDKQ 162
Query: 496 TCTXXSGS 519
TC GS
Sbjct: 163 TCFLKLGS 170
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 32.3 bits (70), Expect = 0.42
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 171 VVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 284
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 32.3 bits (70), Expect = 0.42
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 171 VVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 284
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine
receptor protein 11 protein.
Length = 461
Score = 31.9 bits (69), Expect = 0.56
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Frame = +1
Query: 319 SSERLWRPDVVLLNAAATT-AGDYXLRARVSNNGSVSWIKRLDISTPISMXXHXXPTDMX 495
SS+ +W+PDV+L N+AA + + G+V WI + + P D
Sbjct: 105 SSDHIWKPDVLLYNSAAEDFDSTFKSNLLTYHTGTVVWIPPGVLKFVCQLDVTWFPFDDQ 164
Query: 496 TCTXXSGS 519
C GS
Sbjct: 165 VCEMKFGS 172
>U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 3 protein.
Length = 438
Score = 31.9 bits (69), Expect = 0.56
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = +1
Query: 322 SERLWRPDVVLLNAAAT---TAGDYXLRARVSNNGSVSWIK-RLDISTPISMXXHXXPTD 489
SERLW P+V +N+ +T + + + NG+V W+ R+ +S P S P D
Sbjct: 112 SERLWTPNVCFVNSKSTQVHKSPASNILLIIYPNGTV-WLNYRVQVSAPCSFELSRFPID 170
Query: 490 MXTC 501
C
Sbjct: 171 AQEC 174
>Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical
protein F09E8.7 protein.
Length = 507
Score = 31.5 bits (68), Expect = 0.74
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +1
Query: 316 VSSERLWRPDVVLL-NAAATTAGDYXLRARVSNNGSVSWIKRLDISTPISMXXHXXPTDM 492
V+ E++W PD+VL NA + + + G+V W+ + + P D
Sbjct: 115 VAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWVPPAIYKSSCIIDVEFFPFDD 174
Query: 493 XTCTXXSGS 519
C+ GS
Sbjct: 175 QLCSLTFGS 183
>X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit protein.
Length = 507
Score = 31.5 bits (68), Expect = 0.74
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +1
Query: 316 VSSERLWRPDVVLL-NAAATTAGDYXLRARVSNNGSVSWIKRLDISTPISMXXHXXPTDM 492
V+ E++W PD+VL NA + + + G+V W+ + + P D
Sbjct: 115 VAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWVPPAIYKSSCIIDVEFFPFDD 174
Query: 493 XTCTXXSGS 519
C+ GS
Sbjct: 175 QLCSLTFGS 183
>X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 507
Score = 31.5 bits (68), Expect = 0.74
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Frame = +1
Query: 316 VSSERLWRPDVVLL-NAAATTAGDYXLRARVSNNGSVSWIKRLDISTPISMXXHXXPTDM 492
V+ E++W PD+VL NA + + + G+V W+ + + P D
Sbjct: 115 VAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWVPPAIYKSSCIIDVEFFPFDD 174
Query: 493 XTCTXXSGS 519
C+ GS
Sbjct: 175 QLCSLTFGS 183
>U64843-16|AAX55689.1| 442|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform c protein.
Length = 442
Score = 31.5 bits (68), Expect = 0.74
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +1
Query: 328 RLWRPDVVLLNAAATT---AGDYXLRARVSNNGSVSWIK-RLDISTPISMXXHXXPTDMX 495
++W P+ ++N+ TT + + + NG+V WI RL + +P ++ P D
Sbjct: 113 KIWSPNTCMINSKRTTVHASPSENVMVILYENGTV-WINHRLSVKSPCNLDLRQFPFDTQ 171
Query: 496 TC 501
TC
Sbjct: 172 TC 173
>U64843-15|AAF98227.2| 489|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform a protein.
Length = 489
Score = 31.5 bits (68), Expect = 0.74
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +1
Query: 328 RLWRPDVVLLNAAATT---AGDYXLRARVSNNGSVSWIK-RLDISTPISMXXHXXPTDMX 495
++W P+ ++N+ TT + + + NG+V WI RL + +P ++ P D
Sbjct: 113 KIWSPNTCMINSKRTTVHASPSENVMVILYENGTV-WINHRLSVKSPCNLDLRQFPFDTQ 171
Query: 496 TC 501
TC
Sbjct: 172 TC 173
>U64843-14|AAM45353.1| 475|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform b protein.
Length = 475
Score = 31.5 bits (68), Expect = 0.74
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +1
Query: 328 RLWRPDVVLLNAAATT---AGDYXLRARVSNNGSVSWIK-RLDISTPISMXXHXXPTDMX 495
++W P+ ++N+ TT + + + NG+V WI RL + +P ++ P D
Sbjct: 113 KIWSPNTCMINSKRTTVHASPSENVMVILYENGTV-WINHRLSVKSPCNLDLRQFPFDTQ 171
Query: 496 TC 501
TC
Sbjct: 172 TC 173
>AF303088-1|AAG36975.1| 489|Caenorhabditis elegans serotonin-gated
chloride channel protein.
Length = 489
Score = 31.5 bits (68), Expect = 0.74
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +1
Query: 328 RLWRPDVVLLNAAATT---AGDYXLRARVSNNGSVSWIK-RLDISTPISMXXHXXPTDMX 495
++W P+ ++N+ TT + + + NG+V WI RL + +P ++ P D
Sbjct: 113 KIWSPNTCMINSKRTTVHASPSENVMVILYENGTV-WINHRLSVKSPCNLDLRQFPFDTQ 171
Query: 496 TC 501
TC
Sbjct: 172 TC 173
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 31.5 bits (68), Expect = 0.74
Identities = 16/79 (20%), Positives = 32/79 (40%)
Frame = +3
Query: 75 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQM 254
S C+ + + TY + +K+V ++ + + I E V++ +
Sbjct: 54 SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113
Query: 255 NWIDKRLSWNAGGMGLQHL 311
+W D +SW+ GL L
Sbjct: 114 SWNDTMVSWDKEQWGLSWL 132
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 31.5 bits (68), Expect = 0.74
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 153 PPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 284
PP +++ + + + L+ ++ E E V L D W D+RL WN
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWN 93
>Y08637-1|CAA69927.1| 487|Caenorhabditis elegans nicotinic
acetylcholine receptorsubunit ACR-3 protein.
Length = 487
Score = 31.1 bits (67), Expect = 0.98
Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Frame = +1
Query: 298 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYXLRARVSNNGSVSWIKRLDISTPISMXXH 474
G T V +++W PD+VL NA + V + G + W+ + +
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFNNADGNYLVSFYSNVVVEHTGDMLWVPPAVYKSSCLIDVE 156
Query: 475 XXPTDMXTCTXXSGS 519
P D C+ GS
Sbjct: 157 FFPFDEQVCSLTFGS 171
>U23525-2|AAK71378.1| 487|Caenorhabditis elegans Acetylcholine
receptor protein 3 protein.
Length = 487
Score = 31.1 bits (67), Expect = 0.98
Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 1/75 (1%)
Frame = +1
Query: 298 GCSTWLVSSERLWRPDVVLL-NAAATTAGDYXLRARVSNNGSVSWIKRLDISTPISMXXH 474
G T V +++W PD+VL NA + V + G + W+ + +
Sbjct: 97 GIKTIRVPPDKVWLPDIVLFNNADGNYLVSFYSNVVVEHTGDMLWVPPAVYKSSCLIDVE 156
Query: 475 XXPTDMXTCTXXSGS 519
P D C+ GS
Sbjct: 157 FFPFDEQVCSLTFGS 171
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 30.7 bits (66), Expect = 1.3
Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 4/107 (3%)
Frame = +1
Query: 292 EWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYXLRARVSNNGSVSWIKRLDISTPISM 465
+WG ++ + S+++W PD+VL NA A++ ++G V W + +
Sbjct: 96 DWGGVEYIHIPSDQIWIPDIVLYNNADGEPHITITSLAKIDHHGRVVWQPPSIYKSFCPI 155
Query: 466 XXHXXPTDMXTCTXXSG--SXDAQXXTXWIPXXDTXNXXXVRVXDPG 600
P D TC G S D + + D + V+ D G
Sbjct: 156 NIKYFPYDWQTCEMKFGGWSNDGETLDLYQIPVDVDDIPQVKRQDDG 202
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Frame = +3
Query: 105 LSLMIDSLLATYDRESPP----DSKIVVNLTLHL-RHANIRESESTVRILADLQMNWIDK 269
+S ++++LL Y++ P + V +L R ++ E + L+M W DK
Sbjct: 29 VSQLLENLLTDYNKAVRPVHNASDALKVKFGANLCRLIDVDEVNQVLTTSLWLEMQWYDK 88
Query: 270 RLSWNAGGMG 299
+L+WN G
Sbjct: 89 KLTWNPTDWG 98
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 180 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 284
L +L+ ++E V ++ +L W D RLSWN
Sbjct: 79 LLYYLKLVEVQEPAEKVSVVLELVERWYDPRLSWN 113
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 138 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 287
YD ++P + L L+ + E V ++ ++ W D RLSWNA
Sbjct: 64 YDPDAPKRYNYSIML-YSLKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNA 112
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +3
Query: 204 NIRESESTVRILADLQMNWIDKRLSWNA---GGMGLQHLAG 317
++ E + + + L +W+D RLSWN G + L H G
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPG 84
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
Frame = +1
Query: 325 ERLWRPDVVLL-NAAATTAGDYXLRARVSNNGSVSWIKRLDISTPISMXXHXXPTDMXTC 501
E LW PD++L NA + + VS G V+W + ++ P D+ C
Sbjct: 85 EMLWLPDIILYNNAHGSPWVSETTQVHVSFEGRVTWQPPVVYDAFCNIDIEWYPYDLQIC 144
Query: 502 TXXSGS 519
GS
Sbjct: 145 ELKFGS 150
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +1
Query: 310 WL-VSSERLWRPDVVLLNAA-ATTAGDYXLR-ARVSNNGSVSWIKRLDISTPISMXXHXX 480
W+ +S+ R W PDV+ N D ++ A + NG + + +S+P +
Sbjct: 100 WIKISASRAWIPDVIFTNGIDMDPLLDKDMQMADLRYNGEIRTSRPAVVSSPCPLEIDNF 159
Query: 481 PTDMXTCTXXSGS 519
P D+ C GS
Sbjct: 160 PYDVQKCNISMGS 172
>X83887-1|CAA58764.1| 498|Caenorhabditis elegans alpha-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 498
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Frame = +1
Query: 328 RLWRPDVVLLNAAATT-AGDYXLRARVSNNGSVSWIKRLDISTPISMXXHXXPTDMXTCT 504
++W+PDV+L N+ T Y V + G V W+ + P D C
Sbjct: 103 KIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQKCF 162
Query: 505 XXSGS 519
GS
Sbjct: 163 FKFGS 167
>U40948-4|AAA81730.2| 517|Caenorhabditis elegans Hypothetical
protein F55D10.5 protein.
Length = 517
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +1
Query: 325 ERLWRPDVVLLNAAATTAGDYXLR---ARVSNNGSVSWIK-RLDISTPISMXXHXXPTDM 492
+++W+P+ V +N+ + + + NG+V W+ R+ + P SM P D
Sbjct: 144 DQIWKPNTVFINSKSANIHKSPFKNVFLMIYPNGTV-WVNYRVQVKGPCSMDFSAFPMDQ 202
Query: 493 XTC 501
+C
Sbjct: 203 QSC 205
>AY849796-1|AAW34234.1| 517|Caenorhabditis elegans
acetylcholine-gated chloride channelsubunit ACC-3
protein.
Length = 517
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +1
Query: 325 ERLWRPDVVLLNAAATTAGDYXLR---ARVSNNGSVSWIK-RLDISTPISMXXHXXPTDM 492
+++W+P+ V +N+ + + + NG+V W+ R+ + P SM P D
Sbjct: 144 DQIWKPNTVFINSKSANIHKSPFKNVFLMIYPNGTV-WVNYRVQVKGPCSMDFSAFPMDQ 202
Query: 493 XTC 501
+C
Sbjct: 203 QSC 205
>AY523511-1|AAR98633.1| 498|Caenorhabditis elegans acetylcholine
receptor (57.1 kD)alternative variant 1 protein.
Length = 498
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Frame = +1
Query: 328 RLWRPDVVLLNAAATT-AGDYXLRARVSNNGSVSWIKRLDISTPISMXXHXXPTDMXTCT 504
++W+PDV+L N+ T Y V + G V W+ + P D C
Sbjct: 103 KIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQKCF 162
Query: 505 XXSGS 519
GS
Sbjct: 163 FKFGS 167
>AF022973-7|AAN84815.1| 480|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform b protein.
Length = 480
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Frame = +1
Query: 328 RLWRPDVVLLNAAATT-AGDYXLRARVSNNGSVSWIKRLDISTPISMXXHXXPTDMXTCT 504
++W+PDV+L N+ T Y V + G V W+ + P D C
Sbjct: 103 KIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQKCF 162
Query: 505 XXSGS 519
GS
Sbjct: 163 FKFGS 167
>AF022973-6|AAC25796.1| 498|Caenorhabditis elegans Acetylcholine
receptor protein16, isoform a protein.
Length = 498
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Frame = +1
Query: 328 RLWRPDVVLLNAAATT-AGDYXLRARVSNNGSVSWIKRLDISTPISMXXHXXPTDMXTCT 504
++W+PDV+L N+ T Y V + G V W+ + P D C
Sbjct: 103 KIWKPDVLLYNSVDTNFDSTYQTNMIVYSTGLVHWVPPGIFKISCKIDIQWFPFDEQKCF 162
Query: 505 XXSGS 519
GS
Sbjct: 163 FKFGS 167
>Z93397-1|CAB07719.3| 550|Caenorhabditis elegans Hypothetical
protein ZC482.1 protein.
Length = 550
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Frame = +1
Query: 322 SERLWRPDVVLLNAAATTAGDYXLR---ARVSNNGSVSWIKRLDISTPISMXXHXXPTDM 492
S+ +W PD L N + + R R++ +G V++ RL + SM P D
Sbjct: 132 SQNIWVPDTFLANDKHSYLHEVTERNKMLRINVDGKVAYGMRLTSTLSCSMNLRNFPLDS 191
Query: 493 XTCT 504
CT
Sbjct: 192 QNCT 195
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/37 (32%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +1
Query: 328 RLWRPDVVLLNAAATT--AGDYXLRARVSNNGSVSWI 432
R+W+PD++L+N A A V+++G+V+W+
Sbjct: 193 RIWKPDIILVNNAIREYYASLVSTDVMVTSDGNVTWL 229
>Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical
protein F28F8.1 protein.
Length = 510
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Frame = +1
Query: 316 VSSERLWRPDVVLLNAAATTA--GDYXLRARVSNNGSVSWIKRLDISTPISMXXHXXPTD 489
V + ++W+PDV++ N A + A V N G V + + ++ P D
Sbjct: 106 VPAHKIWKPDVLVYNNANMNVEENEMETNAIVDNTGRVMLFRSMITDISCNLNLQQFPFD 165
Query: 490 MXTC--TXXSGSXD 525
C T S S D
Sbjct: 166 QQICFVTFASWSMD 179
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +3
Query: 90 ENATSLS-LMIDSLLATYDRESPPDSKIVVNLT-LHLRHANIRESESTVRILADLQMNWI 263
E+A L+ L I +A+ + +N L+H + E + I L+++W
Sbjct: 33 ESAKKLAKLNIPHAIASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWH 92
Query: 264 DKRLSWN 284
D RL WN
Sbjct: 93 DDRLMWN 99
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 28.7 bits (61), Expect = 5.2
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +3
Query: 84 ECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE-SESTVRILADLQMN- 257
E + +L +ID+LL YD P+++ VN+T+ L + SE T D+ +
Sbjct: 9 EFNSRINLGKLIDTLLTDYDTHLLPEAE-GVNVTIELHVQGVSGISEITGDFSLDVMYSE 67
Query: 258 -WIDKRLSW 281
W D RLS+
Sbjct: 68 IWQDPRLSF 76
>AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine
receptor, one ofnine alpha a7-like nicotinic
acetylcholine receptor subunits(58.6 kD) (acr-18)
protein.
Length = 510
Score = 28.7 bits (61), Expect = 5.2
Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Frame = +1
Query: 316 VSSERLWRPDVVLLNAAATTA--GDYXLRARVSNNGSVSWIKRLDISTPISMXXHXXPTD 489
V + ++W+PDV++ N A + A V N G V + + ++ P D
Sbjct: 106 VPAHKIWKPDVLVYNNANMNVEENEMETNAIVDNTGRVMLFRSMITDISCNLNLQQFPFD 165
Query: 490 MXTC--TXXSGSXD 525
C T S S D
Sbjct: 166 QQICFVTFASWSMD 179
>AF022985-15|AAB69969.2| 435|Caenorhabditis elegans Hypothetical
protein T15B7.16 protein.
Length = 435
Score = 28.7 bits (61), Expect = 5.2
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Frame = +1
Query: 325 ERLWRPDVVLLNAAAT---TAGDYXLRARVSNNGSVSWIK-RLDISTPISMXXHXXPTDM 492
E+LW P+V +N+ T ++ + + NG+V W+ RL + +P + P D+
Sbjct: 113 EKLWTPNVCFVNSKKTEIHSSPTPNIFLMIYPNGTV-WVNYRLQVQSPCMVDLVLFPMDI 171
Query: 493 XTC 501
C
Sbjct: 172 MNC 174
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 28.7 bits (61), Expect = 5.2
Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 186 LHLRHAN-IRESESTVRILADLQMNWIDKRLSWN 284
LH+ H + I++ + +++ W+D+RL WN
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWN 95
>Z68118-7|CAA92184.2| 573|Caenorhabditis elegans Hypothetical
protein R01E6.4 protein.
Length = 573
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 298 GCSTWLVSSERLWRPDVVLLNAAATTAGDYXLR-ARVSNNGSVSW 429
G T + S+ +W PD+VL N AA L A V+ G+V W
Sbjct: 108 GLKTLHIPSDFIWTPDLVLYNNAAGDPDITILTDALVTFEGNVYW 152
>Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.3 protein.
Length = 399
Score = 28.3 bits (60), Expect = 6.9
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 180 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 284
L L+ + E + V ++ ++ W D RL+WN
Sbjct: 78 LLFSLKLVEVTEPQEKVSVVMEVMEYWFDARLTWN 112
>U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform a protein.
Length = 446
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +1
Query: 316 VSSERLWRPDVVLLNAAATTAGDYXLR--ARVSNNGSVSWIKRLDISTPISMXXHXXPTD 489
V SE +W+PD+++ N A + ++ ++ + G +S + + + P D
Sbjct: 101 VPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKISLFRAIITDITCDLQMEKFPYD 160
Query: 490 MXTC 501
C
Sbjct: 161 QQIC 164
>U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform b protein.
Length = 515
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +1
Query: 316 VSSERLWRPDVVLLNAAATTAGDYXLR--ARVSNNGSVSWIKRLDISTPISMXXHXXPTD 489
V SE +W+PD+++ N A + ++ ++ + G +S + + + P D
Sbjct: 101 VPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKISLFRAIITDITCDLQMEKFPYD 160
Query: 490 MXTC 501
C
Sbjct: 161 QQIC 164
>AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine
receptor, nicotinic,alpha 9 like (58.1 kD) alternative
variant a protein.
Length = 499
Score = 28.3 bits (60), Expect = 6.9
Identities = 13/64 (20%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +1
Query: 316 VSSERLWRPDVVLLNAAATTAGDYXLR--ARVSNNGSVSWIKRLDISTPISMXXHXXPTD 489
V SE +W+PD+++ N A + ++ ++ + G +S + + + P D
Sbjct: 85 VPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKISLFRAIITDITCDLQMEKFPYD 144
Query: 490 MXTC 501
C
Sbjct: 145 QQIC 148
>AL132862-1|CAB60529.2| 434|Caenorhabditis elegans Hypothetical
protein Y73F8A.2 protein.
Length = 434
Score = 28.3 bits (60), Expect = 6.9
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +1
Query: 328 RLWRPDVVLLNAAATTAGDY---XLRARVSNNGSVSWIK-RLDISTPISMXXHXXPTDMX 495
+LW P+V ++N+ +T D + + NG++ W+ R+ P M P D
Sbjct: 135 KLWSPNVCIVNSKSTKVHDSPKPNILLMIFPNGTI-WLNYRIRSEAPCQMNLRNFPLDSI 193
Query: 496 TCT 504
C+
Sbjct: 194 RCS 196
>AF187013-1|AAG35183.1| 573|Caenorhabditis elegans nicotinic
acetylcholine receptor-like subunit ACR-12 protein.
Length = 573
Score = 28.3 bits (60), Expect = 6.9
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +1
Query: 298 GCSTWLVSSERLWRPDVVLLNAAATTAGDYXLR-ARVSNNGSVSW 429
G T + S+ +W PD+VL N AA L A V+ G+V W
Sbjct: 108 GLKTLHIPSDFIWTPDLVLYNNAAGDPDITILTDALVTFEGNVYW 152
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 27.9 bits (59), Expect = 9.1
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 174 VNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWNA 287
VN+ L + H + E E T + + WID+ + W+A
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDA 92
>AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical
protein C04C3.2 protein.
Length = 464
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/62 (22%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = +3
Query: 114 MIDSLLATYDRESPPDSK----IVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLS 278
+I+++ YD+ P ++ ++V++T+ L +RE++ + W D +L+
Sbjct: 44 LIETIQRRYDKRVRPFAESNRPVIVHMTIVLGILTEVRENQQVASFVISHVQKWRDPKLA 103
Query: 279 WN 284
WN
Sbjct: 104 WN 105
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,682,893
Number of Sequences: 27780
Number of extensions: 298790
Number of successful extensions: 1096
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1065
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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