Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_I18
(842 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_03_0366 - 13102147-13102281,13102560-13102739,13102791-131029... 34 0.16
02_05_0686 - 30900748-30902167,30903442-30904742 32 0.66
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 31 0.87
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 1.1
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 31 1.1
01_06_0146 + 26969011-26969995,26970878-26970930 30 2.0
12_02_1005 + 25235757-25235915,25236258-25236374,25236467-252365... 30 2.7
12_01_0524 - 4167867-4168445 29 3.5
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 3.5
07_03_1747 + 29188568-29188715,29188793-29189541 29 3.5
04_03_0904 + 20717005-20718087 29 3.5
02_01_0302 - 2021221-2023305 29 3.5
07_01_0069 + 505291-505327,505726-505956,506317-506652,507025-50... 29 4.6
03_01_0515 - 3864796-3865425 29 4.6
12_02_1174 - 26696869-26698191 29 6.1
11_06_0411 - 23230580-23230795,23231407-23231862,23232142-232321... 29 6.1
07_01_0479 + 3606663-3607448 29 6.1
09_04_0190 - 15443764-15443838,15445360-15445458,15446396-154468... 28 8.1
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 28 8.1
07_03_0600 + 19866757-19867218,19867920-19868429 28 8.1
04_01_0530 - 6928528-6929500,6929514-6930964 28 8.1
02_01_0296 + 1978565-1981197,1981216-1981639,1982280-1982771,198... 28 8.1
01_01_0386 - 2985563-2985986,2986301-2986390,2986529-2986668,298... 28 8.1
>05_03_0366 -
13102147-13102281,13102560-13102739,13102791-13102992,
13104385-13104575
Length = 235
Score = 33.9 bits (74), Expect = 0.16
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -1
Query: 317 HQPSAAAPLPCVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQM-QGQVDYDFGVGG 153
H P AAA P VP++ P L + S GG GL S S + G + D G+GG
Sbjct: 7 HSPRAAAAAPSVPSR-LPRPFLLSLSSPSRGGSGLVAASASAVAAGGSEGDGGIGG 61
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.9 bits (69), Expect = 0.66
Identities = 18/56 (32%), Positives = 18/56 (32%), Gaps = 3/56 (5%)
Frame = -3
Query: 840 PXPXXKXXPRGNPXPPXXLKGXAXPPTXG---PPEQGXXXXXXPPAGPXVXPPGXP 682
P P K P PP PP G PP PP GP PP P
Sbjct: 315 PPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPP 370
Score = 31.5 bits (68), Expect = 0.87
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = -3
Query: 816 PRGNPXPPXXLKGXAXPPTXGPPEQGXXXXXXPPAGPXVXPPGXP 682
P P PP KG + PP P + PP G PP P
Sbjct: 349 PAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPPAAP 393
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = -3
Query: 816 PRGNPXPPXXLKGXAXPPTXGPPEQGXXXXXXPPAGPXVXPPGXP 682
P+G P PP KG PP PP+ PP G PP P
Sbjct: 341 PKG-PPPPPPAKGPPPPP---PPKGPSPPPPPPPGGKKGGPPPPP 381
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/51 (39%), Positives = 21/51 (41%)
Frame = -3
Query: 840 PXPXXKXXPRGNPXPPXXLKGXAXPPTXGPPEQGXXXXXXPPAGPXVXPPG 688
P P K P PP KG PP PP+ G PPA P V P G
Sbjct: 355 PPPPPKGPSPPPPPPPGGKKGGPPPP---PPKGG---ASRPPAAPGV-PTG 398
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 31.5 bits (68), Expect = 0.87
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = -3
Query: 840 PXPXXKXXPRGNPXPPXXLKGXAXPPTXGPPEQGXXXXXXPPAGPXVXPPGXP 682
P P RG PP G A PP PP +G PP P P P
Sbjct: 1161 PAPPPPAGFRGGTPPPNAHGGVAPPP---PPPRGHGGVGGPPTPPGAPAPPMP 1210
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = -3
Query: 816 PRGNPXPPXXLKGXAXPPTXGPPEQGXXXXXXPPAGPXVXPPGXP 682
P P PP L + PP PP PP P PP P
Sbjct: 602 PPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLP 646
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = -3
Query: 816 PRGNPXPPXXLKGXAXPPTXGPPEQGXXXXXXPPAGPXVXPPGXP 682
P P PP +G P+ PP Q PPA P PP P
Sbjct: 1133 PLDAPPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSP 1177
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 1/52 (1%)
Frame = -3
Query: 834 PXXKXXPRGNPXPPXXLKGXAXPPTXGPP-EQGXXXXXXPPAGPXVXPPGXP 682
P P P PP L PP PP G PP P PP P
Sbjct: 1159 PLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPPLPIQPPPIPP 1210
>01_06_0146 + 26969011-26969995,26970878-26970930
Length = 345
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/51 (27%), Positives = 16/51 (31%)
Frame = -3
Query: 834 PXXKXXPRGNPXPPXXLKGXAXPPTXGPPEQGXXXXXXPPAGPXVXPPGXP 682
P P +P PP P PP PP+ P PP P
Sbjct: 76 PAPPPPPTADPSPPLPHDNRTPQPRAAPPPAPAPDQPAPPSPPPSLPPSPP 126
>12_02_1005 +
25235757-25235915,25236258-25236374,25236467-25236535,
25237509-25237964
Length = 266
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -3
Query: 804 PXPPXXLKGXAXPPTXGPPEQGXXXXXXPPAGPXVXPPGXP 682
P PP + G A P T P G PP PPG P
Sbjct: 164 PAPPPPVAGAAAPVTMAPMPAGMVLAAAPPGA--APPPGPP 202
>12_01_0524 - 4167867-4168445
Length = 192
Score = 29.5 bits (63), Expect = 3.5
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = -1
Query: 314 QPSAAAPLPCVPTQSFVDPIHLKICLYSHGGLGLTNVSMSQMQGQVDYDFGVGGGVPIVR 135
QPS+AA P + + + + YSH G + S + G + G GGG P V
Sbjct: 104 QPSSAAVAPLPSSTNLKSAVRSAMGSYSHSGTRRVHFGDSTVLG--EKAAGAGGGEPAV- 160
Query: 134 CEERVDHEGQ*C 99
EE + E + C
Sbjct: 161 VEEVEEEEEKEC 172
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.5 bits (63), Expect = 3.5
Identities = 21/61 (34%), Positives = 22/61 (36%)
Frame = -3
Query: 816 PRGNPXPPXXLKGXAXPPTXGPPEQGXXXXXXPPAGPXVXPPGXPEXHLEHATXXFHLGP 637
P G P P G PP PP PP P PPG P H F+ GP
Sbjct: 27 PYGPPPPQQPAYGHMPPPQGAPP-----PFLAPPPPP---PPGPPPPH----QPQFNFGP 74
Query: 636 G 634
G
Sbjct: 75 G 75
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/50 (28%), Positives = 15/50 (30%)
Frame = -3
Query: 840 PXPXXKXXPRGNPXPPXXLKGXAXPPTXGPPEQGXXXXXXPPAGPXVXPP 691
P P P PP + PP PP PP P PP
Sbjct: 83 PPPPQMYYQPPPPPPPYGVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPP 132
>07_03_1747 + 29188568-29188715,29188793-29189541
Length = 298
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +1
Query: 370 PPPGTTLSAPVYLITAPSPG*SAWTXALQFLCS*TIGPTTCRLARSSSVLG 522
PPP TT++ V L TA + S QF+C+ TTC + S S+ G
Sbjct: 213 PPPTTTMAQHVVLPTAAA---SCHQMQDQFVCARAAETTTCCWSESESLPG 260
>04_03_0904 + 20717005-20718087
Length = 360
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = -1
Query: 842 PXSPXKKXXPXGTPXPXXG*RARPXPQPXXPRSKGXXGEXGPRPAP 705
P P K P TP P + +P P P P + P+P P
Sbjct: 141 PTPPTYKPQPKPTPPPTYKPQPKPTPTPYTPTPTPPSYKPQPKPTP 186
>02_01_0302 - 2021221-2023305
Length = 694
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Frame = -3
Query: 816 PRGNPX--PPXXLKGXAXPPTXGPPEQGXXXXXXPPAGPXVXPPGXP 682
P G P PP A PT PP P+GP PP P
Sbjct: 595 PSGQPGASPPTQHVPGAGTPTTTPPSHSHPSTPPSPSGPSFHPPPTP 641
>07_01_0069 +
505291-505327,505726-505956,506317-506652,507025-507372,
507735-508594,508902-508971,509157-509371,509477-509537,
509606-509715,510644-510694,510794-510916
Length = 813
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/59 (30%), Positives = 26/59 (44%)
Frame = -2
Query: 178 LTTILESGGESRSYVARSESIMRDSDVAFSHSAALAIAQVRRNGNKNNISRRHFMTTAS 2
+ T + ES + E ++RD+DVA S S V R K+ S+R T S
Sbjct: 122 VVTDTDLANESGNGCTHGEGVLRDADVASSRSGNDLTPDVDRTLGKSKASKRQCDATTS 180
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/53 (33%), Positives = 20/53 (37%)
Frame = -3
Query: 840 PXPXXKXXPRGNPXPPXXLKGXAXPPTXGPPEQGXXXXXXPPAGPXVXPPGXP 682
P P + P P PP A PP PP P AGP + PP P
Sbjct: 31 PSPEAEASP---PSPPTE----ASPPPLAPPPSVTSSPPPPAAGPLMPPPPPP 76
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/41 (31%), Positives = 15/41 (36%)
Frame = -3
Query: 804 PXPPXXLKGXAXPPTXGPPEQGXXXXXXPPAGPXVXPPGXP 682
P PP + PP PP + PP P PP P
Sbjct: 125 PPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPPPPPPP 165
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/53 (30%), Positives = 16/53 (30%)
Frame = -3
Query: 840 PXPXXKXXPRGNPXPPXXLKGXAXPPTXGPPEQGXXXXXXPPAGPXVXPPGXP 682
P P P P PP PP P Q PP P PP P
Sbjct: 179 PQPPPSLQPPSPPPPPPTRPPSVKPPVVQPKPQ--PPPTLPPPSPPPPPPTVP 229
>11_06_0411 -
23230580-23230795,23231407-23231862,23232142-23232195,
23232251-23232367
Length = 280
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2
Query: 215 VRVHRANTGRSSNELDRQTTELERRGVGLQHLAGVLGTL 331
V+ H R S EL+RQ ELER+G L+ G L +
Sbjct: 89 VQRHGEELERQSRELERQREELERQGRELKMKDGKLNRM 127
>07_01_0479 + 3606663-3607448
Length = 261
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Frame = -3
Query: 816 PRGNPXPPXXLKGXAXPPTXGPPEQGXXXXXXPPAG--PXVXPP 691
P G P PP PP GPP+ PP G P + PP
Sbjct: 198 PGGPPPPPGPFM--RGPPPMGPPQVRPGMPGGPPPGMRPGMPPP 239
>09_04_0190 -
15443764-15443838,15445360-15445458,15446396-15446891,
15449436-15449479,15449999-15450104,15450243-15450314,
15450474-15450588,15451182-15451407
Length = 410
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 221 VHRANTGRSSNELDRQTTELERRGVG 298
V+ A +SS+ L ++TTE++R G+G
Sbjct: 371 VNEAKETKSSSSLPQKTTEMQRSGIG 396
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = -1
Query: 842 PXSPXKKXXPXGTPXPXXG*RARPXPQPXXPRSKGXXGEXGPRPAP 705
P P + P +P P P P P P G G GP P P
Sbjct: 4 PPKPGDQPSPGRSPNPNLN---LPCPLPPIPSCGGGGGGAGPTPPP 46
>07_03_0600 + 19866757-19867218,19867920-19868429
Length = 323
Score = 28.3 bits (60), Expect = 8.1
Identities = 18/60 (30%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Frame = -3
Query: 804 PXPPXXLKGXAXPPTXGPPEQGXXXXXXPPAGPXVXPPGXPE----XHLEHATXXFHLGP 637
P PP + A PP PP+Q PP P P P+ H ++A H P
Sbjct: 48 PLPPHYYQ--AGPPHAPPPQQPPAMWGQPPPPPPQYAPPPPQQFQLPHQQYAPPPQHYAP 105
>04_01_0530 - 6928528-6929500,6929514-6930964
Length = 807
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 50 VSPHLCYS*CGRMRKRNITVPHDRLAPRNVRSGLPPRLQNRSQPDPA 190
+SP+LCY+ C RK+ +L+ + SGLPP++ S+ + A
Sbjct: 475 LSPNLCYAFCITSRKKT------QLSQPSNNSGLPPKIFTYSELEKA 515
>02_01_0296 +
1978565-1981197,1981216-1981639,1982280-1982771,
1982950-1983087
Length = 1228
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -3
Query: 399 GRGERSPRRWLQPRLAVPRQASTSVPRTP 313
GRG RS R L+P LA+ A + +P P
Sbjct: 442 GRGPRSTLRILRPGLAISEMARSMLPAEP 470
>01_01_0386 -
2985563-2985986,2986301-2986390,2986529-2986668,
2986798-2986893,2987003-2987042,2987760-2987887
Length = 305
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -3
Query: 396 RGERSPRRWLQPRLAVPRQASTSVPRTPAKCCSPTPLRSNS 274
R RSPRR P R + + R+PA S +P+R++S
Sbjct: 224 RDSRSPRRSASPPNGRNRSPTPNASRSPAPRDSRSPMRADS 264
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,098,209
Number of Sequences: 37544
Number of extensions: 597121
Number of successful extensions: 2485
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2212
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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