Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_FL5_I13
         (821 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0348 - 2517072-2517323,2517963-2518160                           28   7.8  
04_01_0530 - 6928528-6929500,6929514-6930964                           28   7.8  
02_05_0822 + 32025992-32026696,32027237-32027314,32027547-320277...    28   7.8  
02_01_0054 - 404464-405152,406087-406618                               28   7.8  

>07_01_0348 - 2517072-2517323,2517963-2518160
          Length = 149

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = -3

Query: 429 TGGEERSPRXXVAXAFSSTTSGLHKRSEDTSQVLQPHSPCVPTQSFVDPIHLKICLYSHG 250
           +GG   SPR       +++T+G+ ++ E TS +L  HS C       D I   +   +H 
Sbjct: 14  SGGSRPSPRRPPCLPPAASTAGVSEQEEYTSSLL--HSICGLVNHMRDWIVSAMDAPAHD 71

Query: 249 GLG 241
           G+G
Sbjct: 72  GVG 74


>04_01_0530 - 6928528-6929500,6929514-6930964
          Length = 807

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 16/47 (34%), Positives = 27/47 (57%)
 Frame = +3

Query: 75  VSPHLCYS*CGRMRKRNITVPHDRLAPRNVRSGLPPRLQNRSQPDPA 215
           +SP+LCY+ C   RK+       +L+  +  SGLPP++   S+ + A
Sbjct: 475 LSPNLCYAFCITSRKKT------QLSQPSNNSGLPPKIFTYSELEKA 515


>02_05_0822 +
           32025992-32026696,32027237-32027314,32027547-32027713,
           32027811-32027885,32028624-32028742,32028908-32029204,
           32029275-32029362,32029467-32029572,32029727-32029837,
           32030520-32030683,32031237-32031357,32031958-32032182,
           32032267-32032457,32032658-32032825,32032911-32033016,
           32033301-32033438,32033533-32033697,32033777-32033980,
           32034341-32034535,32034603-32034674,32034797-32034949
          Length = 1215

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = -2

Query: 364 PPQAFR-GHQPSAAAPLPLRSNSVVCRSNS 278
           PP+ FR GH P AAAP PLR++     S S
Sbjct: 32  PPEKFRSGHLPRAAAP-PLRTDDGSVASGS 60


>02_01_0054 - 404464-405152,406087-406618
          Length = 406

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 26/79 (32%), Positives = 32/79 (40%), Gaps = 7/79 (8%)
 Frame = -3

Query: 348 EDTSQVLQPHSPCVPTQSFVDPIHL-------KICLYSHGGLGLTNVSMSQMQGQVDYDF 190
           E  S  + P    V +  +VDP  L       K  +YS G L L  ++ S   G    D 
Sbjct: 260 EGFSAAVAPTRAAVGSPGYVDPFFLRTGIVSKKSDVYSFGVLLLEAITGSPAAGIPGPDG 319

Query: 189 GVGGGVPIVRCEERVDHEG 133
           G GGG    R   RV  EG
Sbjct: 320 GAGGGNLTARLLPRVRTEG 338


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,138,590
Number of Sequences: 37544
Number of extensions: 325189
Number of successful extensions: 1051
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)