Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_I13
(821 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine r... 31 5.0
U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine r... 31 5.0
U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic acetylch... 31 5.0
BC096083-1|AAH96083.1| 198|Homo sapiens CHRNB4 protein protein. 31 5.0
BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor, n... 31 5.0
BC096081-1|AAH96081.1| 198|Homo sapiens CHRNB4 protein protein. 31 5.0
BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor, n... 31 5.0
AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic acet... 31 5.0
AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic acet... 31 5.0
X01715-1|CAA25861.1| 520|Homo sapiens acetylcholine receptor ga... 31 6.7
BC111802-1|AAI11803.1| 465|Homo sapiens CHRNG protein protein. 31 6.7
AC092165-3|AAY24103.1| 520|Homo sapiens unknown protein. 31 6.7
X55019-1|CAA38759.1| 517|Homo sapiens acetylcholine receptor de... 30 8.8
BC093925-1|AAH93925.1| 517|Homo sapiens cholinergic receptor, n... 30 8.8
BC093923-1|AAH93923.1| 517|Homo sapiens cholinergic receptor, n... 30 8.8
AC092165-2|AAY24102.1| 517|Homo sapiens unknown protein. 30 8.8
>Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.0
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Frame = +1
Query: 91 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 249
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 250 TMRIQADLQMNWIDKRLSWNA 312
M L+ W D RL+WN+
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNS 94
>U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.0
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Frame = +1
Query: 91 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 249
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 250 TMRIQADLQMNWIDKRLSWNA 312
M L+ W D RL+WN+
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNS 94
>U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic
acetylcholine receptor subunit protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.0
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Frame = +1
Query: 91 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 249
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 250 TMRIQADLQMNWIDKRLSWNA 312
M L+ W D RL+WN+
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNS 94
>BC096083-1|AAH96083.1| 198|Homo sapiens CHRNB4 protein protein.
Length = 198
Score = 31.1 bits (67), Expect = 5.0
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Frame = +1
Query: 91 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 249
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 250 TMRIQADLQMNWIDKRLSWNA 312
M L+ W D RL+WN+
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNS 94
>BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.0
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Frame = +1
Query: 91 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 249
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 250 TMRIQADLQMNWIDKRLSWNA 312
M L+ W D RL+WN+
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNS 94
>BC096081-1|AAH96081.1| 198|Homo sapiens CHRNB4 protein protein.
Length = 198
Score = 31.1 bits (67), Expect = 5.0
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Frame = +1
Query: 91 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 249
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 250 TMRIQADLQMNWIDKRLSWNA 312
M L+ W D RL+WN+
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNS 94
>BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.0
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Frame = +1
Query: 91 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 249
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 250 TMRIQADLQMNWIDKRLSWNA 312
M L+ W D RL+WN+
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNS 94
>AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic
acetylcholine receptor beta-4 subunit protein.
Length = 497
Score = 31.1 bits (67), Expect = 5.0
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Frame = +1
Query: 91 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 249
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 250 TMRIQADLQMNWIDKRLSWNA 312
M L+ W D RL+WN+
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNS 94
>AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic
acetylcholine receptor beta 4 subunit protein.
Length = 498
Score = 31.1 bits (67), Expect = 5.0
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Frame = +1
Query: 91 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 249
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 250 TMRIQADLQMNWIDKRLSWNA 312
M L+ W D RL+WN+
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNS 94
>X01715-1|CAA25861.1| 520|Homo sapiens acetylcholine receptor gamma
chain precursor protein.
Length = 520
Score = 30.7 bits (66), Expect = 6.7
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +1
Query: 139 MIDSLLATYDRDSPPDSKI--VVNLTLHLRHANI---RESESTMRIQADLQMNWIDKRLS 303
++ L+ YD + P + VVN++L L N+ E E + ++M W D RL
Sbjct: 32 LLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNEREEALTTNVWIEMQWCDYRLR 91
Query: 304 WN 309
W+
Sbjct: 92 WD 93
>BC111802-1|AAI11803.1| 465|Homo sapiens CHRNG protein protein.
Length = 465
Score = 30.7 bits (66), Expect = 6.7
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +1
Query: 139 MIDSLLATYDRDSPPDSKI--VVNLTLHLRHANI---RESESTMRIQADLQMNWIDKRLS 303
++ L+ YD + P + VVN++L L N+ E E + ++M W D RL
Sbjct: 29 LLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNEREEALTTNVWIEMQWCDYRLR 88
Query: 304 WN 309
W+
Sbjct: 89 WD 90
>AC092165-3|AAY24103.1| 520|Homo sapiens unknown protein.
Length = 520
Score = 30.7 bits (66), Expect = 6.7
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +1
Query: 139 MIDSLLATYDRDSPPDSKI--VVNLTLHLRHANI---RESESTMRIQADLQMNWIDKRLS 303
++ L+ YD + P + VVN++L L N+ E E + ++M W D RL
Sbjct: 32 LLADLMQNYDPNLRPAERDSDVVNVSLKLTLTNLISLNEREEALTTNVWIEMQWCDYRLR 91
Query: 304 WN 309
W+
Sbjct: 92 WD 93
>X55019-1|CAA38759.1| 517|Homo sapiens acetylcholine receptor delta
subunit protein.
Length = 517
Score = 30.3 bits (65), Expect = 8.8
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 184 DSKIVVNLTLHLRHA-NIRESESTMRIQADLQMNWIDKRLSWNAGGVG 324
+ + V L L L + +++E E T+ ++ W D RL WNA G
Sbjct: 49 EESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96
>BC093925-1|AAH93925.1| 517|Homo sapiens cholinergic receptor,
nicotinic, delta protein.
Length = 517
Score = 30.3 bits (65), Expect = 8.8
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 184 DSKIVVNLTLHLRHA-NIRESESTMRIQADLQMNWIDKRLSWNAGGVG 324
+ + V L L L + +++E E T+ ++ W D RL WNA G
Sbjct: 49 EESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96
>BC093923-1|AAH93923.1| 517|Homo sapiens cholinergic receptor,
nicotinic, delta protein.
Length = 517
Score = 30.3 bits (65), Expect = 8.8
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 184 DSKIVVNLTLHLRHA-NIRESESTMRIQADLQMNWIDKRLSWNAGGVG 324
+ + V L L L + +++E E T+ ++ W D RL WNA G
Sbjct: 49 EESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96
>AC092165-2|AAY24102.1| 517|Homo sapiens unknown protein.
Length = 517
Score = 30.3 bits (65), Expect = 8.8
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +1
Query: 184 DSKIVVNLTLHLRHA-NIRESESTMRIQADLQMNWIDKRLSWNAGGVG 324
+ + V L L L + +++E E T+ ++ W D RL WNA G
Sbjct: 49 EESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,467,783
Number of Sequences: 237096
Number of extensions: 1594595
Number of successful extensions: 4563
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4560
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10259383312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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