Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_I09
(824 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 37 0.020
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.33
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.33
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.33
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 32 0.43
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.57
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.57
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.57
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.3
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.3
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 3.1
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 3.1
Z81119-8|CAB03340.1| 504|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 29 4.0
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 29 4.0
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 28 7.1
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 28 7.1
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 28 7.1
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 28 7.1
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 9.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 9.3
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 36.7 bits (81), Expect = 0.020
Identities = 16/40 (40%), Positives = 16/40 (40%)
Frame = +2
Query: 602 PPXGEXXPPXXFXGGXRGXXPPPXXGGGXXNXPPXXXXPP 721
PP G PP G RG PPP G PP PP
Sbjct: 1554 PPMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPP 1593
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 604 PXGGKXPPPXXXWGXPGXXSPPXXXGGXGXXPPXXXXPPP 723
P GG PP G G PP PP PPP
Sbjct: 1555 PMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPP 1594
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Frame = +1
Query: 601 SPXGGKXPPPXXXWGXP---GXXSPPXXXGGXGXXPPXXXXPPP 723
+P G PPP G P G SPP PP PPP
Sbjct: 231 APPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 274
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 604 PXGGKXPPPXXXWGXPGXXSPPXXXGGXGXXPPXXXXPPP 723
P G PPP G P S P G P PPP
Sbjct: 292 PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 331
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = +1
Query: 604 PXGGKXPPPXXXWGXPGXX-SPPXXXGGXGXXPPXXXXPPP 723
P G PPP P SPP G PP PPP
Sbjct: 259 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 299
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Frame = +1
Query: 601 SPXGGKXPPPXXXWGXP---GXXSPPXXXGGXGXXPPXXXXPPP 723
+P G PPP G P G SPP PP PPP
Sbjct: 252 APPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 295
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 604 PXGGKXPPPXXXWGXPGXXSPPXXXGGXGXXPPXXXXPPP 723
P G PPP G P S P G P PPP
Sbjct: 313 PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 352
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = +1
Query: 604 PXGGKXPPPXXXWGXPGXX-SPPXXXGGXGXXPPXXXXPPP 723
P G PPP P SPP G PP PPP
Sbjct: 280 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 320
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Frame = +1
Query: 601 SPXGGKXPPPXXXWGXP---GXXSPPXXXGGXGXXPPXXXXPPP 723
+P G PPP G P G SPP PP PPP
Sbjct: 237 APPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 280
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 604 PXGGKXPPPXXXWGXPGXXSPPXXXGGXGXXPPXXXXPPP 723
P G PPP G P S P G P PPP
Sbjct: 298 PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 337
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/41 (36%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Frame = +1
Query: 604 PXGGKXPPPXXXWGXPGXX-SPPXXXGGXGXXPPXXXXPPP 723
P G PPP P SPP G PP PPP
Sbjct: 265 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPP 305
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 32.3 bits (70), Expect = 0.43
Identities = 18/42 (42%), Positives = 18/42 (42%), Gaps = 4/42 (9%)
Frame = +1
Query: 610 GGKXPPPXXXWGXPGXXSPPXXX-GGXGXXP---PXXXXPPP 723
GG PPP G PG PP GG G P P PPP
Sbjct: 407 GGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPP 448
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Frame = +2
Query: 602 PPXGEXXPPXXFX---GGXRGXXPPPXXGGGXXNXPPXXXXP 718
PP G P + GG G PPP G G PP P
Sbjct: 412 PPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPP 453
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -1
Query: 716 GXXXXGGXXPXPPXXXGGXXXPGXPXKXXGGGXFPPXG 603
G GG P PP G G P GG PP G
Sbjct: 402 GPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPG 439
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.57
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +1
Query: 610 GGKXPPPXXXWGXPGXXSPPXXXGGXGXXPPXXXXPPP 723
GG PPP G P PP G G PP PPP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP---PPPP 790
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 604 PXGGKXPPPXXXWGXPGXXSPPXXXGGXGXXPPXXXXPPP 723
P G PPP G P P G PP PPP
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 610 GGKXPPPXXXWGXPGXXSPPXXXGGXGXXPPXXXXPPP 723
GG PPP P PP G PP PPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Frame = -1
Query: 719 GGXXXXGGXXPXPPXXXGGXXXPGXPXKXXG--GGXFPP 609
GG G P PP GG P P G GG PP
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.57
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +1
Query: 610 GGKXPPPXXXWGXPGXXSPPXXXGGXGXXPPXXXXPPP 723
GG PPP G P PP G G PP PPP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP---PPPP 790
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 604 PXGGKXPPPXXXWGXPGXXSPPXXXGGXGXXPPXXXXPPP 723
P G PPP G P P G PP PPP
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 760
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 610 GGKXPPPXXXWGXPGXXSPPXXXGGXGXXPPXXXXPPP 723
GG PPP P PP G PP PPP
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Frame = -1
Query: 719 GGXXXXGGXXPXPPXXXGGXXXPGXPXKXXG--GGXFPP 609
GG G P PP GG P P G GG PP
Sbjct: 749 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 787
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.57
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +1
Query: 610 GGKXPPPXXXWGXPGXXSPPXXXGGXGXXPPXXXXPPP 723
GG PPP G P PP G G PP PPP
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP---PPPP 373
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +1
Query: 604 PXGGKXPPPXXXWGXPGXXSPPXXXGGXGXXPPXXXXPPP 723
P G PPP G P P G PP PPP
Sbjct: 304 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPP 343
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 610 GGKXPPPXXXWGXPGXXSPPXXXGGXGXXPPXXXXPPP 723
GG PPP P PP G PP PPP
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
Score = 27.9 bits (59), Expect = 9.3
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Frame = -1
Query: 719 GGXXXXGGXXPXPPXXXGGXXXPGXPXKXXG--GGXFPP 609
GG G P PP GG P P G GG PP
Sbjct: 332 GGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPP 370
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.5 bits (68), Expect = 0.76
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +1
Query: 610 GGKXPPPXXXWGXPGXXSPPXXXGGXGXXPPXXXXPPP 723
GG PPP G G PP GG PP PPP
Sbjct: 81 GGIPPPPPMFAG--GIPPPPPMMGGIPPPPPMFGAPPP 116
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 722 GGGXXXXGGXXPXPPXXXGGXXXPGXPXKXXGGGXFPP 609
GGG GG P PP GG G GGG PP
Sbjct: 39 GGGCGGGGGCAP-PPAPCGGGCGGGGGGCGGGGGCAPP 75
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 722 GGGXXXXGGXXPXPPXXXGGXXXPGXPXKXXGGGXFPP 609
GGG GG P PP GG G GGG PP
Sbjct: 39 GGGCGGGGGCAP-PPAPCGGGCGGGGGGCGGGGGCAPP 75
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -3
Query: 684 PPPXXGGGXXPRXPPXXXXGGXFSPXG 604
PPP GGG PR PP GG P G
Sbjct: 154 PPPLMGGGGDPRGPP----GGMGGPPG 176
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -3
Query: 684 PPPXXGGGXXPRXPPXXXXGGXFSPXG 604
PPP GGG PR PP GG P G
Sbjct: 434 PPPLMGGGGDPRGPP----GGMGGPPG 456
>Z81119-8|CAB03340.1| 504|Caenorhabditis elegans Hypothetical
protein T10H4.10 protein.
Length = 504
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 44 DTRENRLTFRTGSGPAFSGLPRIFLAVRSCRFRFVRDRHDSVRPPFN 184
D +L R G +G IF VR RF++ R D++ PFN
Sbjct: 200 DPEFEKLVSRLAKGFENTGFLDIFCPVRILESRFLKWRQDTIFEPFN 246
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical
protein F29D11.1 protein.
Length = 4753
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = +1
Query: 199 WHEQGESDCLIKTKHCDGPRGC*RNVISAQCSECQREEIQASAG 330
W+ G C+ + K CDG + C QCS+ + AG
Sbjct: 267 WNCPGTGHCIDQLKLCDGSKDCADGADEQQCSQNLCPSLGCQAG 310
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL
receptor-related protein protein.
Length = 4753
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = +1
Query: 199 WHEQGESDCLIKTKHCDGPRGC*RNVISAQCSECQREEIQASAG 330
W+ G C+ + K CDG + C QCS+ + AG
Sbjct: 267 WNCPGTGHCIDQLKLCDGSKDCADGADEQQCSQNLCPSLGCQAG 310
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 722 GGGXXXXGGXXPXPPXXXGGXXXPGXPXKXXGGG 621
GGG G P PP G PG P K G
Sbjct: 93 GGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPG 126
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 722 GGGXXXXGGXXPXPPXXXGGXXXPGXPXKXXGGG 621
GGG G P PP G PG P K G
Sbjct: 93 GGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPG 126
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 722 GGGXXXXGGXXPXPPXXXGGXXXPGXPXKXXGGG 621
GGG G P PP G PG P K G
Sbjct: 93 GGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPG 126
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = -1
Query: 722 GGGXXXXGGXXPXPPXXXGGXXXPGXPXKXXGGG 621
GGG G P PP G PG P K G
Sbjct: 93 GGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPG 126
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 610 GGKXPPPXXXWGXPGXXSPPXXXGGXGXXPPXXXXPPP 723
GG PPP PG PP P PPP
Sbjct: 331 GGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 368
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 610 GGKXPPPXXXWGXPGXXSPPXXXGGXGXXPPXXXXPPP 723
GG PPP PG PP P PPP
Sbjct: 341 GGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPP 378
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,068,320
Number of Sequences: 27780
Number of extensions: 280116
Number of successful extensions: 1358
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1202
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2040452812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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