Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_I03
(913 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 39 9e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.098
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.30
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.52
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.69
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 29 1.2
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 1.2
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.6
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 4.9
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 26 8.5
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 39.1 bits (87), Expect = 9e-04
Identities = 47/175 (26%), Positives = 50/175 (28%), Gaps = 16/175 (9%)
Frame = +3
Query: 87 KKXPXPPPLXGGXFF*PPPXGGGAXAXXLPPPXXXXL-----GXPXPPXXXXPPPPP--- 242
KK P PPP PP G G+ LPPP P PP PPPP
Sbjct: 308 KKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPR 367
Query: 243 -----XXXPPPAXXXLPSXXPPXVXXGL-XRXXXRXFXVXGXSXVXXPPPPXRLRLXXSF 404
PPP PP + R + S PP P L S
Sbjct: 368 SAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSA 427
Query: 405 SXXGPPXLXXILXXXGGXPXKKNFXXXKKKXRXKKXPPGXP--PPXXXXXPXPPP 563
PP L G P P G P PP P PPP
Sbjct: 428 PPSLPPSAPPSLPM--GAPAAP--PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 34.3 bits (75), Expect = 0.024
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +3
Query: 504 KKXPPGXPPPXXXXXPXPPPPKSXKXXGXXFPPPPXXPXKNXXXSXPXHP 653
KK PP PPP PP PPPP P N S P P
Sbjct: 308 KKRPPPPPPPSRRNRGKPPIGNGSSNSS--LPPPPPPPRSNAAGSIPLPP 355
Score = 31.5 bits (68), Expect = 0.17
Identities = 43/181 (23%), Positives = 51/181 (28%), Gaps = 16/181 (8%)
Frame = +3
Query: 162 AXXLPPPXXXXLGXPXPPXXXXPPPPPXXXPPPAXXXLPSXXPPXVXXGLXRXXXRXFXV 341
A +PP P P PPP PPP+ + S PP +
Sbjct: 229 APPIPPSIPSSRPPERVPSLSAPAPPPI--PPPSNGTVSS--PPNSPPRPIAPVSMNPAI 284
Query: 342 XGXSXVXXPPPPXRLRLXX-SFSXXGPPXLXXILXXXGGXPXKKNFXXXKKKXRXKKXPP 518
S PPP R+ + + PP G P N P
Sbjct: 285 NSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPR 344
Query: 519 GXP------PPXXXXXPXPPPPKSXKXXGXXFPP---------PPXXPXKNXXXSXPXHP 653
PP P PPPP+S G PP PP P S P P
Sbjct: 345 SNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALP 404
Query: 654 P 656
P
Sbjct: 405 P 405
Score = 27.1 bits (57), Expect = 3.7
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +3
Query: 135 PPPXGGGAXAXXLPPPXXXXLGXPXPPXXXXPPPPPXXXPPPAXXXLPSXXPP 293
PP GA A P P + P P PP P P P P+ P
Sbjct: 436 PPSLPMGAPAAP-PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.3 bits (70), Expect = 0.098
Identities = 30/91 (32%), Positives = 34/91 (37%), Gaps = 3/91 (3%)
Frame = +3
Query: 45 NVDDLLXXRXPXFLKKXPXPPPLXGGXFF*PPPXGGGAXAXXLPPPXXXXLGXPXPPXXX 224
+V D + + LK P PPP P P A A PP +G P P
Sbjct: 716 DVSDTVEEQQKLLLKSPPPPPPAV----IVPTP----APAPIPVPPPAPIMGGPPP---- 763
Query: 225 XPPPPP---XXXPPPAXXXLPSXXPPXVXXG 308
PPPPP PPP P PP V G
Sbjct: 764 -PPPPPGVAGAGPPP-----PPPPPPAVSAG 788
Score = 31.5 bits (68), Expect = 0.17
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +3
Query: 513 PPGXPPPXXXXXPXPPPPKSXKXXGXXFPPPPXXP 617
P PPP PPPP G PPPP P
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 30.3 bits (65), Expect = 0.40
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 4/54 (7%)
Frame = +3
Query: 507 KXPPGXPP----PXXXXXPXPPPPKSXKXXGXXFPPPPXXPXKNXXXSXPXHPP 656
K PP PP P P P PP + G PPPP P PP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.1 bits (62), Expect = 0.92
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
Frame = +2
Query: 710 PPXXPPPXXGGLFWGAQXPXPXXXP--GGXPPPPQPXXFF-LXPPP 838
PP PP A P P P GG PPPP P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/49 (30%), Positives = 17/49 (34%)
Frame = +2
Query: 710 PPXXPPPXXGGLFWGAQXPXPXXXPGGXPPPPQPXXFFLXPPPXGXXSG 856
P P P + G P P G PPP P PPP +G
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP------PPPPAVSAG 788
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/40 (35%), Positives = 16/40 (40%), Gaps = 5/40 (12%)
Frame = +3
Query: 513 PPGXPPPXXXXX---PXPPPPKSXKXXGXXF--PPPPXXP 617
PP PPP P PPPP + G + P P P
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.7 bits (66), Expect = 0.30
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = +3
Query: 513 PPGXPPPXXXXXPXPPPPKSXKXXGXXFPPPPXXPXKNXXXSXP 644
PPG PPP PPPP + PPPP K P
Sbjct: 5 PPGNPPP-------PPPPPGFEPPSQPPPPPPPGYVKKRKNKTP 41
Score = 30.3 bits (65), Expect = 0.40
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 229 PPPRXPPPPPXXGXXSPXPXPP 294
PP PPPPP G P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPP 26
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +3
Query: 210 PPXXXXPPPPPXXXPPPAXXXLPSXXPP 293
PP PPPPP PP+ P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQP--PPPPPP 30
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +1
Query: 232 PPRXPPPPPXXGXXSPXPXPP 294
PP PPPP P P PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.9 bits (64), Expect = 0.52
Identities = 17/50 (34%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +3
Query: 147 GGGAXAXXLP-PPXXXXLGXPXPPXXXXPPPPPX-XXPPPAXXXLPSXXP 290
GG A A + PP P PPPPP PPP+ +P+ P
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPP 1728
Score = 27.1 bits (57), Expect = 3.7
Identities = 17/57 (29%), Positives = 19/57 (33%), Gaps = 2/57 (3%)
Frame = +3
Query: 135 PP--PXGGGAXAXXLPPPXXXXLGXPXPPXXXXPPPPPXXXPPPAXXXLPSXXPPXV 299
PP P P P + P PP P P PPP LP+ P V
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP---PLPASSAPSV 1743
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.5 bits (63), Expect = 0.69
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +3
Query: 171 LPPPXXXXLGXPXPPXXXXPPPPPXXXPPPAXXXLPSXXPP 293
+PPP PP PP P PPPA P PP
Sbjct: 149 IPPPSPASA----PPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Frame = +3
Query: 174 PPPXXXXLGXPX--PPXXXXPPPPPXXXPP-PA-XXXLPSXXPP 293
PP L P PP PPP P PP P+ +PS PP
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPP 173
Score = 26.6 bits (56), Expect = 4.9
Identities = 18/56 (32%), Positives = 20/56 (35%), Gaps = 3/56 (5%)
Frame = +3
Query: 135 PPPXGGGAXAXXLP---PPXXXXLGXPXPPXXXXPPPPPXXXPPPAXXXLPSXXPP 293
PPP A A +P PP L P P PP P A +P PP
Sbjct: 150 PPP--SPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Score = 26.2 bits (55), Expect = 6.5
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +1
Query: 235 PRXPPPPPXXGXXSPXPXPP 294
P PPPPP + P PP
Sbjct: 3 PAPPPPPPAPAPAAAAPAPP 22
Score = 26.2 bits (55), Expect = 6.5
Identities = 11/35 (31%), Positives = 12/35 (34%)
Frame = +3
Query: 513 PPGXPPPXXXXXPXPPPPKSXKXXGXXFPPPPXXP 617
P PPP P PP + P PP P
Sbjct: 168 PSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVP 202
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +3
Query: 135 PPPXGGGAXAXXLPPPXXXXLGXPXPPXXXXPPPPPXXXPPPA 263
PPP A PP L PP PPPP P A
Sbjct: 172 PPPAQPAAPVKS--PPSAPSLPSAVPPMPPKVPPPPLSQAPVA 212
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/66 (28%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Frame = +3
Query: 102 PPPLXG--GXFF*PPPXGGGAXAXXLPPPXXXXLGXPXPPXXXXPPPPPXXXPPPAXXXL 275
PPP+ G PPP PPP G PP P PPP
Sbjct: 209 PPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 268
Query: 276 PSXXPP 293
PP
Sbjct: 269 GEHMPP 274
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/66 (28%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Frame = +3
Query: 102 PPPLXG--GXFF*PPPXGGGAXAXXLPPPXXXXLGXPXPPXXXXPPPPPXXXPPPAXXXL 275
PPP+ G PPP PPP G PP P PPP
Sbjct: 222 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 281
Query: 276 PSXXPP 293
PP
Sbjct: 282 GEHMPP 287
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/66 (28%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Frame = +3
Query: 102 PPPLXG--GXFF*PPPXGGGAXAXXLPPPXXXXLGXPXPPXXXXPPPPPXXXPPPAXXXL 275
PPP+ G PPP PPP G PP P PPP
Sbjct: 235 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 294
Query: 276 PSXXPP 293
PP
Sbjct: 295 GEHMPP 300
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/66 (28%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Frame = +3
Query: 102 PPPLXG--GXFF*PPPXGGGAXAXXLPPPXXXXLGXPXPPXXXXPPPPPXXXPPPAXXXL 275
PPP+ G PPP PPP G PP P PPP
Sbjct: 248 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 307
Query: 276 PSXXPP 293
PP
Sbjct: 308 GEHMPP 313
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/66 (28%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Frame = +3
Query: 102 PPPLXG--GXFF*PPPXGGGAXAXXLPPPXXXXLGXPXPPXXXXPPPPPXXXPPPAXXXL 275
PPP+ G PPP PPP G PP P PPP
Sbjct: 261 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 320
Query: 276 PSXXPP 293
PP
Sbjct: 321 GEHMPP 326
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/66 (28%), Positives = 20/66 (30%), Gaps = 2/66 (3%)
Frame = +3
Query: 102 PPPLXG--GXFF*PPPXGGGAXAXXLPPPXXXXLGXPXPPXXXXPPPPPXXXPPPAXXXL 275
PPP+ G PPP PPP G PP P PPP
Sbjct: 274 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 333
Query: 276 PSXXPP 293
PP
Sbjct: 334 GEHMPP 339
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/55 (30%), Positives = 18/55 (32%), Gaps = 2/55 (3%)
Frame = +3
Query: 102 PPPLXG--GXFF*PPPXGGGAXAXXLPPPXXXXLGXPXPPXXXXPPPPPXXXPPP 260
PPP+ G PPP PPP G PP P PPP
Sbjct: 287 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/44 (31%), Positives = 15/44 (34%), Gaps = 2/44 (4%)
Frame = +3
Query: 525 PPPXXXXXPXP--PPPKSXKXXGXXFPPPPXXPXKNXXXSXPXH 650
PPP P PPP G PPPP + P H
Sbjct: 312 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPFKHHELEEHEGPEH 355
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
Frame = +3
Query: 525 PPPXXXXXPXP--PPPKSXKXXGXXFPPPP 608
PPP P PPP G PPPP
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPP 237
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
Frame = +3
Query: 525 PPPXXXXXPXP--PPPKSXKXXGXXFPPPP 608
PPP P PPP G PPPP
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
Frame = +3
Query: 525 PPPXXXXXPXP--PPPKSXKXXGXXFPPPP 608
PPP P PPP G PPPP
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
Frame = +3
Query: 525 PPPXXXXXPXP--PPPKSXKXXGXXFPPPP 608
PPP P PPP G PPPP
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
Frame = +3
Query: 525 PPPXXXXXPXP--PPPKSXKXXGXXFPPPP 608
PPP P PPP G PPPP
Sbjct: 260 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
Frame = +3
Query: 525 PPPXXXXXPXP--PPPKSXKXXGXXFPPPP 608
PPP P PPP G PPPP
Sbjct: 273 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
Frame = +3
Query: 525 PPPXXXXXPXP--PPPKSXKXXGXXFPPPP 608
PPP P PPP G PPPP
Sbjct: 286 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
Frame = +3
Query: 525 PPPXXXXXPXP--PPPKSXKXXGXXFPPPP 608
PPP P PPP G PPPP
Sbjct: 299 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/54 (33%), Positives = 19/54 (35%)
Frame = -1
Query: 256 GGXXXGGGGGXXXXGGXGXPRXXXXGGGXXXAXAPPPXGGG*KXXPPXRGGGXG 95
GG G GG GG G R GGG A GG + GG G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
Score = 27.5 bits (58), Expect = 2.8
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = -1
Query: 292 GGXXEGRXXXAGGGXXXGGGGGXXXXGGXGXPRXXXXGGGXXXAXAPPPXGGG*KXXPPX 113
GG GR GG GGG GG G G G GG P
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAKVIIEPH 78
Query: 112 RGGG 101
R G
Sbjct: 79 RHAG 82
Score = 26.6 bits (56), Expect = 4.9
Identities = 22/66 (33%), Positives = 22/66 (33%), Gaps = 1/66 (1%)
Frame = -1
Query: 289 GXXEGRXXXAGG-GXXXGGGGGXXXXGGXGXPRXXXXGGGXXXAXAPPPXGGG*KXXPPX 113
G GR GG G GG GG GG G R GG GG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGF--GGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Query: 112 RGGGXG 95
RGG G
Sbjct: 64 RGGAKG 69
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/61 (29%), Positives = 20/61 (32%)
Frame = +3
Query: 75 PXFLKKXPXPPPLXGGXFF*PPPXGGGAXAXXLPPPXXXXLGXPXPPXXXXPPPPPXXXP 254
P K PP+ PP A +PPP P P P PPP P
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAP-PVPKPSVGVPPVPPPSTAP 1217
Query: 255 P 257
P
Sbjct: 1218 P 1218
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +3
Query: 138 PPXGGGAXAXXLPPPXXXXLGXPXPPXXXXPPPPPXXXPPPAXXXLPSXXPP 293
PP + A +P P P P P P P PP PS PP
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP--PSEAPP 1199
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/55 (29%), Positives = 18/55 (32%), Gaps = 2/55 (3%)
Frame = +3
Query: 135 PPPXGGGAXAXXLPPPXXXXLGXPXPPXXXXPPPPPXXXP--PPAXXXLPSXXPP 293
PP A +P P P P P PPP P P +P PP
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +3
Query: 150 GGAXAXXLPPPXXXXLGXPXPPXXXXPPPPPXXXPP 257
G A + +PP P P PPPPP PP
Sbjct: 216 GRAVSPEIPPTYTPKQADPLPAP---PPPPPPTLPP 248
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 25.8 bits (54), Expect = 8.5
Identities = 21/71 (29%), Positives = 22/71 (30%), Gaps = 3/71 (4%)
Frame = -1
Query: 292 GGXXEGRXXXAGGGXXXGGGGGXXXXGGXGXPRXXXXGGGXXXAXAPPPXG---GG*KXX 122
G R GG GGG G G G GG G GG +
Sbjct: 177 GNLFHHRGHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGG 236
Query: 121 PPXRGGGXGXF 89
P GGG G F
Sbjct: 237 PGGFGGGPGGF 247
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,152,900
Number of Sequences: 5004
Number of extensions: 39411
Number of successful extensions: 372
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 224
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 462505890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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