Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_H23
(851 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p pro... 345 5e-95
AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal pr... 345 5e-95
AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA... 345 5e-95
AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE... 334 1e-91
AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB... 334 1e-91
AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD... 223 2e-58
AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC... 204 9e-53
>BT011339-1|AAR96131.1| 465|Drosophila melanogaster RH62603p
protein.
Length = 465
Score = 345 bits (848), Expect = 5e-95
Identities = 151/200 (75%), Positives = 171/200 (85%)
Frame = +1
Query: 85 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 264
F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGS
Sbjct: 17 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 76
Query: 265 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWVEHMSEDCRRRFYKNWYXX 444
KINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VW +H+SE+CRRRFYKNWY
Sbjct: 77 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKS 136
Query: 445 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 624
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQL
Sbjct: 137 KKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQL 196
Query: 625 NGGTIEDKVKWAREHLEKPI 684
NGG+IEDKVKWAREHLEKPI
Sbjct: 197 NGGSIEDKVKWAREHLEKPI 216
Score = 76.6 bits (180), Expect = 4e-14
Identities = 33/49 (67%), Positives = 34/49 (69%)
Frame = +2
Query: 704 QDEMIDCIXXXXXXXXXXXXSRWHTKKLPR*THKGLXKVACIGTWHPSR 850
QDEMIDC+ SRWHTKKLPR THKGL KVACIG WHPSR
Sbjct: 224 QDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSR 272
>AF016835-1|AAC26144.1| 416|Drosophila melanogaster ribosomal
protein L3 protein.
Length = 416
Score = 345 bits (848), Expect = 5e-95
Identities = 151/200 (75%), Positives = 171/200 (85%)
Frame = +1
Query: 85 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 264
F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGS
Sbjct: 6 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 65
Query: 265 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWVEHMSEDCRRRFYKNWYXX 444
KINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VW +H+SE+CRRRFYKNWY
Sbjct: 66 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKS 125
Query: 445 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 624
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQL
Sbjct: 126 KKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQL 185
Query: 625 NGGTIEDKVKWAREHLEKPI 684
NGG+IEDKVKWAREHLEKPI
Sbjct: 186 NGGSIEDKVKWAREHLEKPI 205
Score = 76.6 bits (180), Expect = 4e-14
Identities = 33/49 (67%), Positives = 34/49 (69%)
Frame = +2
Query: 704 QDEMIDCIXXXXXXXXXXXXSRWHTKKLPR*THKGLXKVACIGTWHPSR 850
QDEMIDC+ SRWHTKKLPR THKGL KVACIG WHPSR
Sbjct: 213 QDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSR 261
>AE014297-1262|AAF54610.2| 416|Drosophila melanogaster CG4863-PA,
isoform A protein.
Length = 416
Score = 345 bits (848), Expect = 5e-95
Identities = 151/200 (75%), Positives = 171/200 (85%)
Frame = +1
Query: 85 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 264
F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGS
Sbjct: 6 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 65
Query: 265 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWVEHMSEDCRRRFYKNWYXX 444
KINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VW +H+SE+CRRRFYKNWY
Sbjct: 66 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKS 125
Query: 445 XXXXXXXXXXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQL 624
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQL
Sbjct: 126 KKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQL 185
Query: 625 NGGTIEDKVKWAREHLEKPI 684
NGG+IEDKVKWAREHLEKPI
Sbjct: 186 NGGSIEDKVKWAREHLEKPI 205
Score = 76.6 bits (180), Expect = 4e-14
Identities = 33/49 (67%), Positives = 34/49 (69%)
Frame = +2
Query: 704 QDEMIDCIXXXXXXXXXXXXSRWHTKKLPR*THKGLXKVACIGTWHPSR 850
QDEMIDC+ SRWHTKKLPR THKGL KVACIG WHPSR
Sbjct: 213 QDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSR 261
>AE014297-1265|AAF54609.1| 403|Drosophila melanogaster CG4863-PE,
isoform E protein.
Length = 403
Score = 334 bits (820), Expect = 1e-91
Identities = 146/192 (76%), Positives = 166/192 (86%)
Frame = +1
Query: 109 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 288
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 289 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWVEHMSEDCRRRFYKNWYXXXXXXXXXX 468
EAVT++ETPPM+ VG VGYIETP GLRAL+ VW +H+SE+CRRRFYKNWY
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120
Query: 469 XXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDK 648
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDK
Sbjct: 121 SKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDK 180
Query: 649 VKWAREHLEKPI 684
VKWAREHLEKPI
Sbjct: 181 VKWAREHLEKPI 192
Score = 76.6 bits (180), Expect = 4e-14
Identities = 33/49 (67%), Positives = 34/49 (69%)
Frame = +2
Query: 704 QDEMIDCIXXXXXXXXXXXXSRWHTKKLPR*THKGLXKVACIGTWHPSR 850
QDEMIDC+ SRWHTKKLPR THKGL KVACIG WHPSR
Sbjct: 200 QDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSR 248
>AE014297-1264|AAN13496.1| 403|Drosophila melanogaster CG4863-PB,
isoform B protein.
Length = 403
Score = 334 bits (820), Expect = 1e-91
Identities = 146/192 (76%), Positives = 166/192 (86%)
Frame = +1
Query: 109 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 288
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 289 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWVEHMSEDCRRRFYKNWYXXXXXXXXXX 468
EAVT++ETPPM+ VG VGYIETP GLRAL+ VW +H+SE+CRRRFYKNWY
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWYKSKKKAFTKA 120
Query: 469 XXXWQDELGRKSIEKDFKKMIRYCSVVRVIAHTQMKLLKQRQKKAHIMEIQLNGGTIEDK 648
W D+LG+KSIE DF+KM+RYC V+RVIAH+Q++L+KQRQKKAH+MEIQLNGG+IEDK
Sbjct: 121 SKKWTDDLGKKSIENDFRKMLRYCKVIRVIAHSQIRLIKQRQKKAHVMEIQLNGGSIEDK 180
Query: 649 VKWAREHLEKPI 684
VKWAREHLEKPI
Sbjct: 181 VKWAREHLEKPI 192
Score = 76.6 bits (180), Expect = 4e-14
Identities = 33/49 (67%), Positives = 34/49 (69%)
Frame = +2
Query: 704 QDEMIDCIXXXXXXXXXXXXSRWHTKKLPR*THKGLXKVACIGTWHPSR 850
QDEMIDC+ SRWHTKKLPR THKGL KVACIG WHPSR
Sbjct: 200 QDEMIDCVGVTKGKGFKGVTSRWHTKKLPRKTHKGLRKVACIGAWHPSR 248
>AE014297-1263|AAF54612.2| 161|Drosophila melanogaster CG4863-PD,
isoform D protein.
Length = 161
Score = 223 bits (545), Expect = 2e-58
Identities = 96/118 (81%), Positives = 105/118 (88%)
Frame = +1
Query: 85 FQHPXHGSMGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGS 264
F P HGSM FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGS
Sbjct: 6 FSAPRHGSMAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGS 65
Query: 265 KINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALLTVWVEHMSEDCRRRFYKNWY 438
KINKKE+VEAVT++ETPPM+ VG VGYIETP GLRAL+ VW +H+SE+CRRRFYKNWY
Sbjct: 66 KINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKNWY 123
>AE014297-1266|AAF54611.1| 125|Drosophila melanogaster CG4863-PC,
isoform C protein.
Length = 125
Score = 204 bits (499), Expect = 9e-53
Identities = 89/108 (82%), Positives = 98/108 (90%)
Frame = +1
Query: 109 MGFYPKKRSRRHRGKVKAFPKDDPSKPVHLTAFIGYKAGMTHVVREPDRPGSKINKKEIV 288
M FYPKKRS RHRGKVKAFPKDD SKPVHLT FIGYKAGMTH+VRE DRPGSKINKKE+V
Sbjct: 1 MAFYPKKRSARHRGKVKAFPKDDASKPVHLTCFIGYKAGMTHIVREADRPGSKINKKEVV 60
Query: 289 EAVTIIETPPMVCVGVVGYIETPHGLRALLTVWVEHMSEDCRRRFYKN 432
EAVT++ETPPM+ VG VGYIETP GLRAL+ VW +H+SE+CRRRFYKN
Sbjct: 61 EAVTVLETPPMIVVGAVGYIETPFGLRALVNVWAQHLSEECRRRFYKN 108
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,156,580
Number of Sequences: 53049
Number of extensions: 839220
Number of successful extensions: 1777
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1777
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4085918148
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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