Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_H21
(789 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0405 - 17767303-17767665,17767815-17768039,17768115-177683... 206 2e-53
03_01_0535 + 4006284-4006418,4006483-4006599,4007363-4007587,400... 48 9e-06
02_04_0096 + 19669428-19669525,19670770-19670818,19671041-196711... 47 2e-05
06_01_0729 + 5367796-5368071,5368390-5368483,5368708-5368782,536... 46 3e-05
02_05_0058 + 25478274-25478421,25478963-25479142,25479714-254800... 36 0.028
02_05_0060 + 25484349-25484496,25485514-25485705,25486614-254869... 32 0.45
11_06_0246 - 21660349-21660624,21661071-21661589,21662003-216623... 30 2.4
10_08_0747 - 20272157-20272456,20272538-20272664,20272770-202728... 30 2.4
10_06_0101 + 10736987-10737100,10737263-10737301,10737397-107374... 29 3.2
04_04_0835 + 28538032-28539006,28539113-28539203,28539291-285394... 29 4.2
03_02_0801 + 11343227-11343885,11344018-11344087,11344362-113444... 29 4.2
04_01_0567 - 7263744-7263922,7264020-7264259,7264919-7264982,726... 28 7.4
08_02_1125 + 24488073-24488244,24488358-24488398,24488621-244888... 28 9.7
08_02_0216 + 14390739-14390847,14390983-14391017,14391112-143911... 28 9.7
06_03_1369 + 29620958-29621030,29622421-29622452,29622538-296225... 28 9.7
02_03_0395 - 18554596-18555090,18555194-18555566,18556026-18556168 28 9.7
>07_03_0405 -
17767303-17767665,17767815-17768039,17768115-17768342,
17768607-17768621,17768622-17768810,17769106-17769213,
17769917-17770045
Length = 418
Score = 206 bits (502), Expect = 2e-53
Identities = 111/211 (52%), Positives = 137/211 (64%), Gaps = 8/211 (3%)
Frame = +1
Query: 73 SLESIINNNLTGRDLEEFNRIHFGRR--NNLE-IKLKESSIXXXXXXXXXXXXXXFPAKD 243
SL ++ +NL+ +E +R+ G LE I L E++ F A
Sbjct: 28 SLHRLLQSNLSPELFKEASRLLLGLNCGRALEAISLPEATSALAKAHNFDVQAFRFDADK 87
Query: 244 EQTRPPRIVKVGIIQHSIAVPTDRPVNEQKKAIFNKVKKIIDVAGQEGVNIICFQ----- 408
E R PR+++VG+IQ+SIA+PT +QKKAI KVK +ID AG GVNI+C Q
Sbjct: 88 EYLRQPRVIRVGLIQNSIAIPTTSHFADQKKAIMEKVKPMIDAAGDAGVNILCLQVSQLS 147
Query: 409 ELWNMPFAFCTREKQPWCEFAESAEDGPTTTFLRELAIKYAMVIVSSILERDEKHSDILW 588
E W MPFAFCTREK+ WCEFAE DG +T FL++LA KY MVIVS ILERD H +I+W
Sbjct: 148 EAWTMPFAFCTREKR-WCEFAEPV-DGESTQFLQQLAKKYNMVIVSPILERDVNHGEIVW 205
Query: 589 NTAVVISDTGNVIGKHRKNHIPRVGDFNEST 681
NTAVVI + GN+IG HRKNHIPRVGDFNEST
Sbjct: 206 NTAVVIGNHGNIIGIHRKNHIPRVGDFNEST 236
Score = 74.9 bits (176), Expect = 6e-14
Identities = 29/36 (80%), Positives = 31/36 (86%)
Frame = +3
Query: 681 YYMEGNTGHPVFATRYGKIAVNICFGRHHVLNWMMF 788
YYMEGNTGHPVF T YGKI VNIC+GRHH LNW+ F
Sbjct: 237 YYMEGNTGHPVFETAYGKIGVNICYGRHHPLNWLAF 272
>03_01_0535 +
4006284-4006418,4006483-4006599,4007363-4007587,
4008112-4008205,4008587-4008661,4009045-4009123,
4009385-4009400,4009441-4009584,4009822-4009904,
4010012-4010093
Length = 349
Score = 48.0 bits (109), Expect = 9e-06
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Frame = +1
Query: 319 VNEQKKAIFNKVKKIIDVAGQEGVNIICFQELWNMPFAFCTREKQPWCEFAESAEDG--- 489
V K + ++ I+ A G ++ E+WN P++ + E+AE E G
Sbjct: 55 VTADKARNIARAREAIEAAAAGGAKLVLLPEIWNGPYS-----NDSFPEYAEDIEAGGDA 109
Query: 490 -PTTTFLRELAIKYAMVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHI 651
P+ + + E+A + +V + E+ + L+NT V G + GKHRK H+
Sbjct: 110 APSFSMMSEVARSLQITLVGGSIS--ERSGNKLYNTCCVFGSDGELKGKHRKIHL 162
>02_04_0096 +
19669428-19669525,19670770-19670818,19671041-19671132,
19671235-19671386,19671478-19671524,19671617-19671650,
19671769-19671935,19672070-19672166,19672239-19672408
Length = 301
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/100 (28%), Positives = 55/100 (55%)
Frame = +1
Query: 355 KKIIDVAGQEGVNIICFQELWNMPFAFCTREKQPWCEFAESAEDGPTTTFLRELAIKYAM 534
+++I A ++G NI+ QEL+ + FC ++ + + A+ + PT ++LA + +
Sbjct: 32 ERLIREAHKKGANIVLVQELFEGQY-FCQAQRLDFFQRAKPYKGNPTIIRFQKLAKELEV 90
Query: 535 VIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRKNHIP 654
VI S E + ++ +N+ +I G +G +RK+HIP
Sbjct: 91 VIPVSFFE---EANNAHYNSVAIIDADGTDLGLYRKSHIP 127
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 681 YYMEGNTGHPVFATRYGKIAVNICF 755
Y+ G+TG F T+Y I V IC+
Sbjct: 137 YFNPGDTGFKAFKTKYATIGVGICW 161
>06_01_0729 +
5367796-5368071,5368390-5368483,5368708-5368782,
5368919-5368997,5369155-5369170,5369260-5369346,
5369451-5369533,5369616-5369769
Length = 287
Score = 46.4 bits (105), Expect = 3e-05
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Frame = +1
Query: 397 ICFQELWNMPFAFCTREKQPWCEFAESAEDG--PTTTFLRELAIKYAMVIVSSILERDEK 570
+ FQE+WN P++ E P E + G P+ + L E+A + + IV + E+
Sbjct: 16 VLFQEIWNCPYSM---ETLP--SHGEDIDGGASPSVSMLSEVAARRRITIVGGSIP--ER 68
Query: 571 HSDILWNTAVVISDTGNVIGKHRKNHIPRV---GD--FNESTT 684
S L+NT VI G + KHRK H+ + GD F ES T
Sbjct: 69 SSGRLFNTCCVIGPDGQIKAKHRKLHLFEIDIPGDITFRESDT 111
>02_05_0058 +
25478274-25478421,25478963-25479142,25479714-25480007,
25480261-25480564,25480672-25480751,25480765-25480934
Length = 391
Score = 36.3 bits (80), Expect = 0.028
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 13/115 (11%)
Frame = +1
Query: 337 AIFNKVKKIIDVAGQEGVNIICFQELW------NMPFAFC-----TREKQPWCEFAESAE 483
A +K +K++ A G I+ F E++ F + K+ + ++ +A
Sbjct: 47 ATLDKAEKLVAEAAGYGSQIVLFPEVFVGGYPHGSTFGLTIGNRSAKGKEDFHKYHAAAI 106
Query: 484 D--GPTTTFLRELAIKYAMVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRK 642
D GP T L LA KY + +V ++ER L+NT + G +GKHRK
Sbjct: 107 DVPGPEVTRLAALAGKYKIFLVMGVVERV---GYTLYNTVLFFDPLGKYLGKHRK 158
>02_05_0060 +
25484349-25484496,25485514-25485705,25486614-25486907,
25487140-25487421,25487571-25487743
Length = 362
Score = 32.3 bits (70), Expect = 0.45
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 487 GPTTTFLRELAIKYAMVIVSSILERDEKHSDILWNTAVVISDTGNVIGKHRK 642
GP T L +A KY + +V ++ER+ L+ + + G +GKHRK
Sbjct: 114 GPEVTRLAAMAGKYKVFLVMGVIERE---GYTLYCSVLFFDPLGRYLGKHRK 162
>11_06_0246 -
21660349-21660624,21661071-21661589,21662003-21662360,
21662499-21662734,21663459-21663509,21663636-21663682,
21663917-21664076
Length = 548
Score = 29.9 bits (64), Expect = 2.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -2
Query: 698 VTFHVVVDSLKSPTLGMWFL 639
+ FH+V D+L P + MWFL
Sbjct: 289 IMFHIVTDALNFPAMMMWFL 308
>10_08_0747 -
20272157-20272456,20272538-20272664,20272770-20272843,
20272928-20272971,20273697-20276223
Length = 1023
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/74 (21%), Positives = 31/74 (41%)
Frame = +1
Query: 412 LWNMPFAFCTREKQPWCEFAESAEDGPTTTFLRELAIKYAMVIVSSILERDEKHSDILWN 591
+WN+ + +E QP E A +D R++ + + ++ D D+ W+
Sbjct: 765 VWNLEYCLQLQESQPSTETALDLDDS-GAHLPRDIVVARRVAPLAPDASADAAGDDMSWS 823
Query: 592 TAVVISDTGNVIGK 633
+ TGNV +
Sbjct: 824 ETASFTATGNVFSQ 837
>10_06_0101 +
10736987-10737100,10737263-10737301,10737397-10737474,
10737539-10737685,10737781-10737888,10738115-10738449,
10738572-10739544,10739702-10739980
Length = 690
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/45 (28%), Positives = 23/45 (51%)
Frame = -2
Query: 692 FHVVVDSLKSPTLGMWFLRCFPITFPVSLMTTAVFQSMSECFSSL 558
FH+V D L + MWF+R P+ V + F+ ++ + S+
Sbjct: 409 FHIVTDRLNFAAMTMWFIRHPPLPATVHVENIDNFKWLNSSYCSV 453
>04_04_0835 +
28538032-28539006,28539113-28539203,28539291-28539448,
28539543-28539594,28539707-28539786,28539890-28539983,
28540078-28540633,28541160-28541259,28541576-28541617,
28542445-28542588
Length = 763
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -2
Query: 488 PSSADSANSHHGCFSLVQNAKGIFHNSWKQMMLTPSW 378
PS+ S N F L++N NSW Q+++T W
Sbjct: 628 PSTTASVNLDESQFKLLRNCFQGTSNSWGQVIVTAGW 664
>03_02_0801 +
11343227-11343885,11344018-11344087,11344362-11344433,
11344511-11344980,11345626-11346598
Length = 747
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = -2
Query: 461 HHGCFSLVQNAKGIFHNSWKQMMLTPSWP--ATSMIFLTLLKIAFF 330
H C ++++ + G+ N W+ + PS+P SMI L + F
Sbjct: 649 HSSCRNVIERSFGVLKNKWRILFHLPSYPQQKQSMIICACLALHNF 694
>04_01_0567 - 7263744-7263922,7264020-7264259,7264919-7264982,
7265088-7265393,7265652-7265866,7266195-7266489,
7266596-7266655,7267091-7267717,7268510-7268596,
7269292-7269612,7270051-7270224,7272806-7275022
Length = 1594
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = -2
Query: 743 HRDLAVSGREYRMAGVTFHVVVDSLKSPTLGMWFLRCF 630
+R LA S R+ GVT V+D LG +RCF
Sbjct: 1163 NRYLATSRELTRLEGVTKAPVIDHFSETVLGATTIRCF 1200
>08_02_1125 +
24488073-24488244,24488358-24488398,24488621-24488889,
24489061-24489157,24489407-24489753,24489816-24490173,
24490319-24490894,24491374-24491649
Length = 711
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/65 (24%), Positives = 26/65 (40%), Gaps = 1/65 (1%)
Frame = -2
Query: 692 FHVVVDSLKSPTLGMWFLRCFPITFPVSLMTTAVFQSMSECFSS-LSNIEDTITIAYLMA 516
FH+V D L + MWFL + + F ++ +S L +E I Y
Sbjct: 435 FHIVTDKLNYAAMRMWFLENSQGKAAIEVQNIEDFTWLNSSYSPVLKQLESQFMINYYFK 494
Query: 515 SSRRK 501
+ + K
Sbjct: 495 TQQDK 499
>08_02_0216 +
14390739-14390847,14390983-14391017,14391112-14391153,
14391253-14391346,14391476-14391672,14392407-14392424,
14392938-14393182,14393300-14393657,14393741-14394316,
14395172-14395447
Length = 649
Score = 27.9 bits (59), Expect = 9.7
Identities = 17/63 (26%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = -2
Query: 692 FHVVVDSLKSPTLGMWFLRCFPITFPVSLMTTAVFQSMSECFSS-LSNIEDTITIAYLMA 516
FH+V D L + MWFL P + + F ++ +S L +E I Y
Sbjct: 373 FHIVTDRLNYAPMRMWFLSNPPGKATIEVRNIEEFTWLNASYSPVLKQLESQSMIDYYFR 432
Query: 515 SSR 507
+ R
Sbjct: 433 THR 435
>06_03_1369 +
29620958-29621030,29622421-29622452,29622538-29622598,
29622695-29622711,29622916-29623250,29623329-29623686,
29623784-29624371,29624664-29624939
Length = 579
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/72 (25%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Frame = -2
Query: 692 FHVVVDSLKSPTLGMWFLRCFPITFPVSLMTTAVFQSMSECFSS-LSNIEDTITIAYLMA 516
FH+V D L + MWFL P + + F+ ++ + L +E Y
Sbjct: 299 FHLVTDKLNFGAMNMWFLLNPPGDATIHVENVDDFKWLNSSYCPVLKQLESVAMKEYYFK 358
Query: 515 SSRRKVVVGPSS 480
+ R K + SS
Sbjct: 359 ADRPKTLSAGSS 370
>02_03_0395 - 18554596-18555090,18555194-18555566,18556026-18556168
Length = 336
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2
Query: 788 EHHPVQDVVPSE-ADVHRDLAVSGREYRMAGVTFHVVV 678
E HP+ DV+PSE +V D + R MAG H +V
Sbjct: 283 EVHPIDDVMPSEVVEVKVDDEETNRTDEMAGDGDHAMV 320
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,049,570
Number of Sequences: 37544
Number of extensions: 475072
Number of successful extensions: 1406
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1399
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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