Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_FL5_H19
         (774 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ...    29   7.1  
AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-P...    29   7.1  
AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA...    29   7.1  
AE014296-1422|AAF50443.2|  407|Drosophila melanogaster CG7072-PA...    29   9.4  

>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
            initiation factoreIF4G protein.
          Length = 1666

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +3

Query: 231  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 356
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1572 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1612


>AE014296-3057|AAN11668.1| 2133|Drosophila melanogaster CG14073-PB,
           isoform B protein.
          Length = 2133

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
 Frame = +3

Query: 501 YYWRSRPYAS-SHPPLRSRLHQPDHQIPDSIHQPPQT*HPFPSNP 632
           Y    +P+ S  H P      QP HQ P    QP    HP P  P
Sbjct: 9   YQTHHQPHPSMQHHPTHPHHQQPHHQQPHHPQQPIHQHHPPPPPP 53


>AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA
            protein.
          Length = 1345

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +3

Query: 231  SSTFDHPFSTPVLRSYWHRNQIEQCHCAITTERLLHHKRLPR 356
            S TF   F  PVL+ Y   N+  Q  C  T + L+H    PR
Sbjct: 1251 SETFQK-FCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPR 1291


>AE014296-1422|AAF50443.2|  407|Drosophila melanogaster CG7072-PA
           protein.
          Length = 407

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 21/67 (31%), Positives = 29/67 (43%)
 Frame = +1

Query: 478 ATPSSSRITIGGLALMHQATLPCDLGYINPIIKSPIPYTNHPRLNIHFHQIL*PPYXXEF 657
           ATPS   + I  L    QA +P +LG+  P +    P  +H    +H   +  P Y   F
Sbjct: 37  ATPSFYFVAIALLFAAAQA-VPIELGHYAPALVHHAPVLSHAVHAVHAEPVAYPKY--SF 93

Query: 658 XPGFKAP 678
             G K P
Sbjct: 94  NYGIKDP 100


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,021,780
Number of Sequences: 53049
Number of extensions: 671897
Number of successful extensions: 2221
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2220
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)