Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_FL5_H10
         (917 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC041620-1|AAH41620.1|  150|Homo sapiens zinc finger and SCAN do...    31   5.9  
AY279349-1|AAQ62846.1|  146|Homo sapiens truncated zinc finger p...    31   5.9  
AY262259-1|AAP36989.1|  613|Homo sapiens zinc finger protein pro...    31   5.9  
AK128624-1|BAC87537.1|  595|Homo sapiens protein ( Homo sapiens ...    31   5.9  
AK000602-1|BAA91283.1|  150|Homo sapiens protein ( Homo sapiens ...    31   5.9  
AC007679-1|AAX93069.1|  922|Homo sapiens unknown protein.              31   7.7  

>BC041620-1|AAH41620.1|  150|Homo sapiens zinc finger and SCAN
           domain containing 2 protein.
          Length = 150

 Score = 31.1 bits (67), Expect = 5.9
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -1

Query: 476 GRGERSPRRWLQPRLAVPRQASTSVPEDTSQVLQPHSP 363
           GR     RRWL+P +    Q  T +P++    LQ H P
Sbjct: 78  GRLRELCRRWLRPEVHTKEQMLTMLPKEIQAWLQEHRP 115


>AY279349-1|AAQ62846.1|  146|Homo sapiens truncated zinc finger
           protein 29 isoform protein.
          Length = 146

 Score = 31.1 bits (67), Expect = 5.9
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -1

Query: 476 GRGERSPRRWLQPRLAVPRQASTSVPEDTSQVLQPHSP 363
           GR     RRWL+P +    Q  T +P++    LQ H P
Sbjct: 78  GRLRELCRRWLRPEVHTKEQMLTMLPKEIQAWLQEHRP 115


>AY262259-1|AAP36989.1|  613|Homo sapiens zinc finger protein
           protein.
          Length = 613

 Score = 31.1 bits (67), Expect = 5.9
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -1

Query: 476 GRGERSPRRWLQPRLAVPRQASTSVPEDTSQVLQPHSP 363
           GR     RRWL+P +    Q  T +P++    LQ H P
Sbjct: 78  GRLRELCRRWLRPEVHTKEQMLTMLPKEIQAWLQEHRP 115


>AK128624-1|BAC87537.1|  595|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46783 fis, clone TRACH3028180, highly  similar
           to Zinc finger protein 29. ).
          Length = 595

 Score = 31.1 bits (67), Expect = 5.9
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -1

Query: 476 GRGERSPRRWLQPRLAVPRQASTSVPEDTSQVLQPHSP 363
           GR     RRWL+P +    Q  T +P++    LQ H P
Sbjct: 59  GRLRELCRRWLRPEVHTKEQMLTMLPKEIQAWLQEHRP 96


>AK000602-1|BAA91283.1|  150|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20595 fis, clone KAT08558. ).
          Length = 150

 Score = 31.1 bits (67), Expect = 5.9
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -1

Query: 476 GRGERSPRRWLQPRLAVPRQASTSVPEDTSQVLQPHSP 363
           GR     RRWL+P +    Q  T +P++    LQ H P
Sbjct: 78  GRLRELCRRWLRPEVHTKEQMLTMLPKEIQAWLQEHRP 115


>AC007679-1|AAX93069.1|  922|Homo sapiens unknown protein.
          Length = 922

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
 Frame = -1

Query: 473 RGERSPRRWLQPRLAVPR-----QASTSVPEDTSQVLQPHSPCVPTQSFVDPIHLKICQY 309
           RG R P++ + P  AVP+      AS S+P + S +  P +P +      D I  +I   
Sbjct: 448 RGPRRPQKPIPP--AVPQGNLSMPASVSLPVEASHIRSPSTPELSADELPDDIANEITDI 505

Query: 308 PH 303
           PH
Sbjct: 506 PH 507


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,019,545
Number of Sequences: 237096
Number of extensions: 2137544
Number of successful extensions: 6489
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6419
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11936890730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)