Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_H10
(917 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 31 0.015
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 30 0.026
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 28 0.14
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 28 0.14
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 27 0.24
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 27 0.24
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 27 0.24
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 27 0.24
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 26 0.55
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 26 0.55
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 25 0.73
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 25 0.96
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 25 0.96
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.3
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.3
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.3
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.3
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.3
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 25 1.3
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 2.9
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 22 6.8
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 6.8
Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1 p... 22 9.0
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 9.0
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 31.1 bits (67), Expect = 0.015
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = +3
Query: 162 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESXVRILADLQ 326
C++ TS S + L YDR+ P+ K ++ L ++H N+ E V L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 327 MNWIDKRLSWNA 362
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 30.3 bits (65), Expect = 0.026
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +3
Query: 168 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESXVRILADLQMNW 335
N +++S ++D+LL YD PD V + + +R I E + + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 336 IDKRLSWNAG 365
+D+RL++ G
Sbjct: 62 VDRRLAFQGG 71
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.9 bits (59), Expect = 0.14
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 356 ERRXNGAAALGWCPRERLWRPDVVLLNAA 442
E + G + P + +WRPD+VL N A
Sbjct: 93 EPKEYGGVKMLHVPSDHIWRPDIVLYNNA 121
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 27.9 bits (59), Expect = 0.14
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 356 ERRXNGAAALGWCPRERLWRPDVVLLNAA 442
E + G + P + +WRPD+VL N A
Sbjct: 93 EPKEYGGVKMLHVPSDHIWRPDIVLYNNA 121
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 27.1 bits (57), Expect = 0.24
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +2
Query: 395 PRERLWRPDVVLLNAAATTAGDYALR 472
P +++W+PD+VL N A G+Y +R
Sbjct: 104 PPDKVWKPDIVLFNNA---DGNYEVR 126
Score = 22.6 bits (46), Expect = 5.1
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 240 KIVVNLTL-HLRHANIRESESXVRILADLQMNWIDKRLSWNAGXMG 374
K+ VN L ++ N+ E ++ L+ W D +L W+ G
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYG 96
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 27.1 bits (57), Expect = 0.24
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 395 PRERLWRPDVVLLNAA 442
P + +WRPD+VL N A
Sbjct: 102 PSDHIWRPDIVLYNNA 117
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 27.1 bits (57), Expect = 0.24
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +2
Query: 395 PRERLWRPDVVLLNAA 442
P RLW+PDV++ N+A
Sbjct: 101 PPHRLWKPDVLMYNSA 116
Score = 21.8 bits (44), Expect = 9.0
Identities = 18/83 (21%), Positives = 37/83 (44%), Gaps = 5/83 (6%)
Frame = +3
Query: 141 AIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NIRESESXV 305
A+A++ + +++ LL TY+ E P ++ +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 306 RILADLQMNWIDKRLSWNAGXMG 374
L++ W D + WN G
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYG 93
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 27.1 bits (57), Expect = 0.24
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = +2
Query: 371 GAAALGWCPRERLWRPDVVLLNAA 442
G + + P E +W PD+VL N A
Sbjct: 103 GGVEMLYVPSENIWLPDIVLYNNA 126
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 25.8 bits (54), Expect = 0.55
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 395 PRERLWRPDVVLLNAA 442
P R+WRPD +L N A
Sbjct: 83 PYNRVWRPDTILYNNA 98
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 25.8 bits (54), Expect = 0.55
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 389 WCPRERLWRPDVVLLNAA 442
+ P E +W PD+VL N A
Sbjct: 96 YVPSEHIWLPDIVLYNNA 113
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 25.4 bits (53), Expect = 0.73
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2
Query: 395 PRERLWRPDVVLLNAA 442
P E +W PD+VL N A
Sbjct: 98 PSEHIWLPDIVLYNNA 113
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.0 bits (52), Expect = 0.96
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +3
Query: 189 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESXVRILADLQMNWIDKRLS 353
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 354 WNAGXMG 374
WN G
Sbjct: 118 WNESEYG 124
Score = 23.4 bits (48), Expect = 2.9
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = +2
Query: 404 RLWRPDVVLLNAA 442
+LW+PD+++ N+A
Sbjct: 135 KLWKPDILMYNSA 147
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 25.0 bits (52), Expect = 0.96
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +3
Query: 189 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESXVRILADLQMNWIDKRLS 353
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 354 WNAGXMG 374
WN G
Sbjct: 118 WNESEYG 124
Score = 23.4 bits (48), Expect = 2.9
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = +2
Query: 404 RLWRPDVVLLNAA 442
+LW+PD+++ N+A
Sbjct: 135 KLWKPDILMYNSA 147
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.3
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 279 NIRESESXVRILADLQMNWIDKRLSWNAGXMG 374
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 23.4 bits (48), Expect = 2.9
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = +2
Query: 404 RLWRPDVVLLNAA 442
+LW+PD+++ N+A
Sbjct: 67 KLWKPDILMYNSA 79
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.3
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 279 NIRESESXVRILADLQMNWIDKRLSWNAGXMG 374
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 23.4 bits (48), Expect = 2.9
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = +2
Query: 404 RLWRPDVVLLNAA 442
+LW+PD+++ N+A
Sbjct: 67 KLWKPDILMYNSA 79
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.3
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 279 NIRESESXVRILADLQMNWIDKRLSWNAGXMG 374
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 23.4 bits (48), Expect = 2.9
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = +2
Query: 404 RLWRPDVVLLNAA 442
+LW+PD+++ N+A
Sbjct: 67 KLWKPDILMYNSA 79
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.3
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 279 NIRESESXVRILADLQMNWIDKRLSWNAGXMG 374
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 23.4 bits (48), Expect = 2.9
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = +2
Query: 404 RLWRPDVVLLNAA 442
+LW+PD+++ N+A
Sbjct: 67 KLWKPDILMYNSA 79
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.3
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 279 NIRESESXVRILADLQMNWIDKRLSWNAGXMG 374
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 23.4 bits (48), Expect = 2.9
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = +2
Query: 404 RLWRPDVVLLNAA 442
+LW+PD+++ N+A
Sbjct: 67 KLWKPDILMYNSA 79
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 24.6 bits (51), Expect = 1.3
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 279 NIRESESXVRILADLQMNWIDKRLSWNAGXMG 374
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
Score = 23.4 bits (48), Expect = 2.9
Identities = 6/13 (46%), Positives = 12/13 (92%)
Frame = +2
Query: 404 RLWRPDVVLLNAA 442
+LW+PD+++ N+A
Sbjct: 67 KLWKPDILMYNSA 79
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.4 bits (48), Expect = 2.9
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +3
Query: 168 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESXVRILADLQMNW 335
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 336 IDKRLSW 356
D RL++
Sbjct: 68 TDPRLAF 74
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 22.2 bits (45), Expect = 6.8
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +2
Query: 401 ERLWRPDVVLLN 436
ER+WRPD N
Sbjct: 115 ERIWRPDTYFYN 126
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.2 bits (45), Expect = 6.8
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +3
Query: 168 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESXVRILADLQMNW 335
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 336 IDKRLSW 356
D RL++
Sbjct: 68 TDPRLAF 74
>Y13429-1|CAA73841.1| 402|Apis mellifera dopamine receptor, D1
protein.
Length = 402
Score = 21.8 bits (44), Expect = 9.0
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = -3
Query: 405 RSRGHQPSAAAPFXLRSNSVVCRSNSFEDLPVSAXRTRTHEC 280
R+RG+QPS + RS V R+ S + +S R+ C
Sbjct: 345 RARGNQPSTSECGEFRSVVVQKRNGSMIECNIS-PRSSADSC 385
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.8 bits (44), Expect = 9.0
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = -2
Query: 148 AIAQVRRNGNKNNISRQTFYDX*SIEAIPSESXXXTDS 35
A+AQ + G + N + + YD + A+ E T+S
Sbjct: 472 AVAQAQLGGERQNGRKDSGYDGAASTAVIHEPVVETNS 509
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,699
Number of Sequences: 438
Number of extensions: 3952
Number of successful extensions: 39
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29871933
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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