Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_H07
(780 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,177... 53 2e-07
06_02_0297 - 13891954-13892556,13893019-13893855,13894179-138943... 46 3e-05
07_03_1291 + 25545749-25546262,25546989-25547669,25547693-255477... 38 0.012
02_02_0078 + 6587491-6588021,6588160-6589151,6592430-6592607,659... 35 0.063
11_01_0661 - 5387194-5388486 29 4.1
10_06_0145 + 11215895-11216860 29 4.1
05_03_0362 - 12973488-12974251,12975346-12975580,12976410-129767... 29 4.1
04_04_0706 + 27419215-27419371,27419521-27419734,27419818-274199... 29 4.1
12_02_1217 + 27082452-27083593,27085041-27085158 29 5.5
08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614 28 7.2
05_06_0279 + 26896997-26897457,26898100-26898220,26898310-268985... 28 7.2
04_03_0573 + 17329365-17330440,17330505-17331201 28 7.2
03_02_0552 + 9416362-9417790,9417827-9417936,9418032-9418484 28 7.2
02_02_0298 - 8713660-8714073 28 7.2
01_03_0086 - 12316010-12316162,12316626-12316712,12316810-123169... 28 7.2
06_01_0144 + 1089090-1091390 28 9.6
02_02_0604 - 12064451-12065683,12065729-12065827,12065858-120659... 28 9.6
01_06_0854 - 32477994-32478161,32478689-32478826,32479225-324794... 28 9.6
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 28 9.6
>07_01_0242 + 1775704-1776797,1776839-1777759,1778312-1778412,
1778770-1778900,1779530-1779788,1779823-1780098,
1780100-1781352
Length = 1344
Score = 53.2 bits (122), Expect = 2e-07
Identities = 51/163 (31%), Positives = 71/163 (43%)
Frame = +2
Query: 113 ADVIGIHKPGKPKNETASYRPISLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRAR 292
A ++ I KPGK +N YRPISL K+ ++L RL V I +D Q GF +
Sbjct: 971 AYIVLIQKPGK-ENTVDGYRPISLQNCSVKILSKVLATRL-QRVFLRMIHLD-QTGF-LK 1026
Query: 293 HSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVL 472
C+ + ++ RRK T + D KAFD V + L L G P+ +
Sbjct: 1027 GRCISENLIYATELIQACYRRK-CQTIIVKLDFTKAFDSVIWSSLFKILAVRGFPENWIS 1085
Query: 473 IIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPLLFXFV 601
I+ LS+ + G R G+ QG LS LF V
Sbjct: 1086 WIKGLLSSSKSAVLLNGVPGRWICCKKGLLQGDPLSSYLFILV 1128
>06_02_0297 -
13891954-13892556,13893019-13893855,13894179-13894394,
13895455-13895874,13896198-13896506
Length = 794
Score = 46.0 bits (104), Expect = 3e-05
Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 1/153 (0%)
Frame = +2
Query: 137 PGKPKNETAS-YRPISLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQV 313
P K ET + +RPISL+ K+ +LL RL + K++ D +GF +
Sbjct: 377 PKKTSLETVNDFRPISLMGISLKIVTKLLAGRLQGVIL--KLVSDNHYGFIKGKTIQDCP 434
Query: 314 HRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLS 493
E+I ++ I L D KAFD + H+ ++ + +MG P + + ++ S
Sbjct: 435 AWPFEYIHQCQQSKREIVL--LKLDFEKAFDTIEHSAILSVMQHMGFPLKWIEWVQMVFS 492
Query: 494 NRSFRYRVEGTRSRPRHVTAGVPQGSALSPLLF 592
S + G GV QG LS LLF
Sbjct: 493 TASSAVLLNGVPGNSFKCRRGVRQGVPLSLLLF 525
>07_03_1291 +
25545749-25546262,25546989-25547669,25547693-25547751,
25549152-25549242,25549330-25549743,25550191-25550243,
25550947-25551177,25551492-25551708,25551790-25551890,
25552446-25552532,25553536-25553676,25553839-25553961,
25554070-25554522,25554931-25555308,25555410-25556060,
25556264-25556368,25556482-25556707,25557204-25557241
Length = 1520
Score = 37.5 bits (83), Expect = 0.012
Identities = 31/111 (27%), Positives = 45/111 (40%)
Frame = +2
Query: 269 EQFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNM 448
+Q GF + C+ + ++ + RK T + D AKAFD V L L
Sbjct: 5 DQTGF-LKGRCISENLIYATELIQACHARK-CQTLIIKLDFAKAFDSVNWQSLFQILSVK 62
Query: 449 GVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGVPQGSALSPLLFXFV 601
G PD + I++ L + G + G+ QG LSP LF V
Sbjct: 63 GFPDNWISWIKNLLQTSKSAVLLHGIPGKWITCKKGLRQGDPLSPYLFILV 113
>02_02_0078 +
6587491-6588021,6588160-6589151,6592430-6592607,
6592635-6592794,6592992-6593158,6593246-6593869
Length = 883
Score = 35.1 bits (77), Expect = 0.063
Identities = 33/144 (22%), Positives = 61/144 (42%)
Frame = +2
Query: 161 ASYRPISLLPAIGKLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILL 340
+ +RPISL + K+ ++L RL F+ I+ + Q F E +
Sbjct: 185 SKFRPISLCNVLYKIASKVLANRLKLFLP--DIVSEFQSAFVPGRLITDSSLVAYECLNT 242
Query: 341 GLNRRKPIPTGALFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVE 520
+ P AL D+ KA+D++ + L L +G + + +++ + R+
Sbjct: 243 IKKQSNKKPFFALKIDMMKAYDRIEWSYLHGCLMRLGFEQDWINTVMRCVTSTRYAIRIN 302
Query: 521 GTRSRPRHVTAGVPQGSALSPLLF 592
G + + G+ QG +SP LF
Sbjct: 303 GELTDTVVPSRGIRQGDPISPYLF 326
>11_01_0661 - 5387194-5388486
Length = 430
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3
Query: 528 VPGPVTSQPESRKAPPSPRYYSXLY 602
VPGP + E PPS R+Y Y
Sbjct: 31 VPGPTEDEEEEHATPPSRRWYRAAY 55
>10_06_0145 + 11215895-11216860
Length = 321
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
Frame = +3
Query: 456 QTGSCSSYE--TTCRTVRSDIESRERVPGPVTSQPESRKAPPSPR 584
+ G CS E TT +D+ S P P +S + PP+PR
Sbjct: 235 EPGCCSVSEASTTTTADAADVSSTGSSPSPTSSNQAATATPPAPR 279
>05_03_0362 -
12973488-12974251,12975346-12975580,12976410-12976738,
12977277-12977404,12977695-12977879,12977972-12978165,
12978239-12978368,12978507-12978566,12979037-12979059,
12979158-12979218,12979677-12979748,12979804-12979924,
12980351-12980415,12980973-12981089,12981970-12982239
Length = 917
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 456 QTGSCSS-YETTCRTVRSDIESRERVPGPVTSQPES 560
Q+GS SS + + +T SD+ES + +PG V P+S
Sbjct: 881 QSGSGSSHFMQSSKTDDSDVESEDSMPGIVDGDPDS 916
>04_04_0706 +
27419215-27419371,27419521-27419734,27419818-27419913,
27420006-27420123,27420211-27420384,27420633-27420803,
27420932-27420987,27421125-27421214,27421296-27421444,
27421640-27421722,27421830-27421958,27422063-27422137,
27422248-27422416,27422965-27423104,27423191-27423298,
27423603-27423783,27424445-27424542,27424639-27424728,
27424881-27425034,27425376-27425431,27425483-27425533,
27425651-27425732,27425821-27425995,27426748-27426823,
27426951-27427121,27427198-27427269,27427350-27427454,
27427948-27428037,27428703-27428908,27428989-27429190,
27429294-27429473,27429858-27429925,27430005-27430341,
27430428-27430637,27430765-27431448,27431537-27431940,
27432495-27432542,27432777-27433023,27433381-27433602,
27433796-27434026
Length = 2122
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 496 VRQVVSYDEHEPVWHSHVIQFVYQTVVPDFIERLRY 389
V +V Y + HSH+I+ V + F+ER+ Y
Sbjct: 352 VESLVGYSSSDDSCHSHLIEIVETLNIEKFVERIVY 387
>12_02_1217 + 27082452-27083593,27085041-27085158
Length = 419
Score = 28.7 bits (61), Expect = 5.5
Identities = 14/51 (27%), Positives = 21/51 (41%)
Frame = +3
Query: 429 YTNCITWECQTGSCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSP 581
Y ++ C T +CS E V SD + + G + + R PP P
Sbjct: 27 YVLALSSSCNTPACSDEEEEDDEVGSDADGDDLYGGELEEEDSPRPPPPRP 77
>08_01_1042 + 10560340-10560627,10561001-10561415,10561571-10561614
Length = 248
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +2
Query: 521 GTRSRPRHVTAGVPQGSALSP 583
G RSRPR AG PQ +A SP
Sbjct: 156 GRRSRPRRCLAGRPQATAGSP 176
>05_06_0279 +
26896997-26897457,26898100-26898220,26898310-26898586,
26898735-26898895
Length = 339
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +1
Query: 499 FVPISSRGNAFPAPSRHSRSPARLRPLPVTI 591
F+P ++ G+A AP+R R+P R R +P T+
Sbjct: 53 FLPAAA-GSACEAPARKKRTPGRWRRIPRTL 82
>04_03_0573 + 17329365-17330440,17330505-17331201
Length = 590
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 98 AAWKEADVIGIHKPGKPKNETASYRPISLLPAI-GKLYERLLRKR 229
A ++E D + + PG +++ ++RP LP + +L E L +R
Sbjct: 281 AVYREDDRVDVATPGDGRSDYPAFRPTPTLPLVASRLAEEWLEER 325
>03_02_0552 + 9416362-9417790,9417827-9417936,9418032-9418484
Length = 663
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = +2
Query: 386 DIAKAFDKVWHNGLIYKLYNMG-VPDRLVL 472
D+A+AF+ V H G + +YN+G V +R V+
Sbjct: 230 DVAEAFEVVLHKGEVGHVYNIGTVKERRVI 259
>02_02_0298 - 8713660-8714073
Length = 137
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/34 (41%), Positives = 16/34 (47%)
Frame = -2
Query: 386 RRRGLLSEWVSACSALVRCAP*GGALDGRTSVWR 285
R RGLL+ +A A CA G DG WR
Sbjct: 85 RNRGLLTTAAAAGDACAACAAGAGGGDGADGCWR 118
>01_03_0086 -
12316010-12316162,12316626-12316712,12316810-12316942,
12317057-12317330,12317588-12317714,12317815-12318071,
12319055-12319139
Length = 371
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Frame = +1
Query: 493 EPFVPISSRGNAF----PAPSRHSRSPARLRPLPVTI 591
+P+VPI G + P P SRSP R LP+ +
Sbjct: 20 DPYVPIPDPGGNYGRSKPGPPAPSRSPPTSRNLPIAV 56
>06_01_0144 + 1089090-1091390
Length = 766
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +3
Query: 441 ITWECQTGSCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPPSPRYYSXL 599
++W CQ+G+ + T S +E++++ P ++ R A RY + L
Sbjct: 563 LSWACQSGAVAEVILTWHIATSLLETKQQQQLPTSASRSRRTAARLSRYCAYL 615
>02_02_0604 -
12064451-12065683,12065729-12065827,12065858-12065955,
12066782-12066924,12067233-12067729
Length = 689
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2
Query: 506 RYRVEGTRSRPRHVTAGVPQGSALSPLLF 592
R + GT S P G+ QG LSPLLF
Sbjct: 216 RIDINGTLSDPFKPMRGLRQGDPLSPLLF 244
>01_06_0854 -
32477994-32478161,32478689-32478826,32479225-32479440,
32479580-32479656,32481144-32481555,32482248-32482850,
32482954-32483229
Length = 629
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 96 PRRGKKRTLSAYTSRANRRTKPRVTAP 176
PR G+KR + R +PRVTAP
Sbjct: 402 PRSGRKRGAGQQRRQRRRSPRPRVTAP 428
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 27.9 bits (59), Expect = 9.6
Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 277 WIPRQTLVRPSSAPPHGAHLTRAEQ-AETHSDRSP 378
W P L P++A P G LT E A T +D SP
Sbjct: 596 WCPMARLFGPTAAAPFGHDLTVPEALANTRADGSP 630
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,421,785
Number of Sequences: 37544
Number of extensions: 546294
Number of successful extensions: 1886
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1884
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2091906552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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