Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_H07
(780 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical ... 105 4e-23
AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse trans... 74 1e-13
AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical ... 74 1e-13
U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical pr... 73 2e-13
U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical pr... 69 4e-12
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 48 1e-05
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 36 0.032
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ... 36 0.043
U40030-6|AAA81135.3| 431|Caenorhabditis elegans Hypothetical pr... 30 2.1
U40030-5|AAR12976.2| 506|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z83316-3|CAB05895.3| 1054|Caenorhabditis elegans Hypothetical pr... 29 3.7
U00034-1|AAA50639.2| 566|Caenorhabditis elegans Pim (mammalian ... 28 6.5
AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical ... 28 6.5
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 28 8.6
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 28 8.6
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 28 8.6
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 28 8.6
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 28 8.6
>AF100669-1|AAK39265.1| 931|Caenorhabditis elegans Hypothetical
protein R11E3.3 protein.
Length = 931
Score = 105 bits (252), Expect = 4e-23
Identities = 73/211 (34%), Positives = 108/211 (51%), Gaps = 3/211 (1%)
Frame = +2
Query: 20 LKLLPAQLITMLATILNAAMTNCIFPAAWKEADVIGIHKPGKPKNETASYRPISLLPAIG 199
++ LP + LA + N +++ I P WK+A+VI I KP K +SYRPISLL I
Sbjct: 356 IRKLPMCGYSFLAYLYNVSLSTNIIPDKWKKANVIMIPKPKKDPAIASSYRPISLLSPIA 415
Query: 200 KLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTGAL 379
KL E+ + KR+ + + + Q GF+ HS V ++T I+ GLN + P P A+
Sbjct: 416 KLLEKAILKRIKNSIESPA----HQHGFKPEHSTTTAVIQVTNDIIGGLNMKNP-PERAI 470
Query: 380 F--FDIAKAFDKVWHNGLIYKLYN-MGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVT 550
D+ AFDKV L L G+ ++ L + +YL R R + S+ +
Sbjct: 471 MACLDLRAAFDKVPTKKLCNDLMEAQGIEPKIKLWLGNYLHKRLIRTSHDNHWSKWHTLL 530
Query: 551 AGVPQGSALSPLLFXFVYQRYTPVSGDHLAL 643
GVPQGS +SP LF F Y + P D + +
Sbjct: 531 GGVPQGSVISPNLFTF-YLKDMPTQQDTMLI 560
>AF054983-1|AAC72298.1| 1066|Caenorhabditis elegans reverse
transcriptase protein.
Length = 1066
Score = 73.7 bits (173), Expect = 1e-13
Identities = 57/191 (29%), Positives = 85/191 (44%)
Frame = +2
Query: 20 LKLLPAQLITMLATILNAAMTNCIFPAAWKEADVIGIHKPGKPKNETASYRPISLLPAIG 199
LK +I ++ N + + P WK + I K G +N +YRPI LLP +
Sbjct: 575 LKSCHDNVIDLITDRFNRYLHSRNVPKPWKTSKTTLIFKKGDREN-LENYRPICLLPVLY 633
Query: 200 KLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTGAL 379
K++ + L R+ S ++ EQ GFR S + +H L LL + R IP +
Sbjct: 634 KVFTKCLLNRMRR--SLDEAQPVEQAGFRRSFSTIDHIHSLQR--LLEVGREYQIPLTLV 689
Query: 380 FFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGV 559
F D KAFD V H + L G + ++++ N + + R VT GV
Sbjct: 690 FIDFKKAFDSVEHQAIWKSLDEQGADGAYIDLLKECYKNCTTNF-TPFHRPVAVPVTKGV 748
Query: 560 PQGSALSPLLF 592
QG +SP LF
Sbjct: 749 RQGDPISPNLF 759
>AF025462-7|AAB71003.1| 805|Caenorhabditis elegans Hypothetical
protein K10F12.5 protein.
Length = 805
Score = 73.7 bits (173), Expect = 1e-13
Identities = 57/191 (29%), Positives = 85/191 (44%)
Frame = +2
Query: 20 LKLLPAQLITMLATILNAAMTNCIFPAAWKEADVIGIHKPGKPKNETASYRPISLLPAIG 199
LK +I ++ N + + P WK + I K G +N +YRPI LLP +
Sbjct: 314 LKSCHDNVIDLITDRFNRYLHSRNVPKPWKTSKTTLIFKKGDREN-LENYRPICLLPVLY 372
Query: 200 KLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTGAL 379
K++ + L R+ S ++ EQ GFR S + +H L LL + R IP +
Sbjct: 373 KVFTKCLLNRMRR--SLDEAQPVEQAGFRRSFSTIDHIHSLQR--LLEVGREYQIPLTLV 428
Query: 380 FFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGV 559
F D KAFD V H + L G + ++++ N + + R VT GV
Sbjct: 429 FIDFKKAFDSVEHQAIWKSLDEQGADGAYIDLLKECYKNCTTNF-TPFHRPVAVPVTKGV 487
Query: 560 PQGSALSPLLF 592
QG +SP LF
Sbjct: 488 RQGDPISPNLF 498
>U58735-1|AAC48148.1| 891|Caenorhabditis elegans Hypothetical
protein F20B4.7 protein.
Length = 891
Score = 73.3 bits (172), Expect = 2e-13
Identities = 57/191 (29%), Positives = 85/191 (44%)
Frame = +2
Query: 20 LKLLPAQLITMLATILNAAMTNCIFPAAWKEADVIGIHKPGKPKNETASYRPISLLPAIG 199
LK +I ++ N + + P WK + I K G +N +YRPI LLP +
Sbjct: 404 LKSCHDNVIDLITDRFNRYLHSRNVPKPWKTSKTTLIFKKGDREN-LENYRPICLLPVLY 462
Query: 200 KLYERLLRKRLWDFVSANKILIDEQFGFRARHSCVHQVHRLTEHILLGLNRRKPIPTGAL 379
K++ + L R+ S ++ EQ GFR S + +H L LL + R IP +
Sbjct: 463 KVFTKCLLNRMRR--SLDEAQPVEQAGFRRSFSTIDHIHSLQR--LLEVGREYQIPLTLV 518
Query: 380 FFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAGV 559
F D KAFD V H + L G + ++++ N + + R VT GV
Sbjct: 519 FIDFKKAFDTVEHQAIWKSLDEQGADGAYIDLLKECYKNCTTNF-TPFHRPVAVPVTKGV 577
Query: 560 PQGSALSPLLF 592
QG +SP LF
Sbjct: 578 RQGDPISPNLF 588
>U58738-4|AAB00604.1| 358|Caenorhabditis elegans Hypothetical
protein F31A9.6 protein.
Length = 358
Score = 68.9 bits (161), Expect = 4e-12
Identities = 32/72 (44%), Positives = 49/72 (68%)
Frame = +2
Query: 377 LFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAG 556
++ D +KAFD++ H+ L+ KL ++ L++ + ++LSNRSFR R+ T S + T G
Sbjct: 17 IYLDFSKAFDRLPHDLLLDKLVSLRKNKNLLIWVNEFLSNRSFRVRIGQTLSSRKFATCG 76
Query: 557 VPQGSALSPLLF 592
VPQG+ LSPLLF
Sbjct: 77 VPQGAVLSPLLF 88
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +2
Query: 395 KAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRH-VTAGVPQGS 571
KAFD+V H+ L+ KL++ G+ D+LS+R+F +V H +++GVP+GS
Sbjct: 2 KAFDQVNHSLLLQKLHDFGINPLFCNWFHDFLSSRTFSVKVNNHIDPNIHPISSGVPKGS 61
Query: 572 ALSPLLF 592
P LF
Sbjct: 62 VSGPFLF 68
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 35.9 bits (79), Expect = 0.032
Identities = 22/72 (30%), Positives = 33/72 (45%)
Frame = +2
Query: 377 LFFDIAKAFDKVWHNGLIYKLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRHVTAG 556
+F D KAFD V H + L G + + ++++ N + + R VT G
Sbjct: 40 VFIDFKKAFDSVEHQAIWKSLDEQGADEAYIDLLKECYKNCTTNF-TPFLRPITVPVTKG 98
Query: 557 VPQGSALSPLLF 592
V QG +SP LF
Sbjct: 99 VRQGDPISPNLF 110
>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
protein F21E9.1 protein.
Length = 1170
Score = 35.5 bits (78), Expect = 0.043
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +2
Query: 434 KLYNMGVPDRLVLIIRDYLSNRSFRYRVEGTRSRPRH-VTAGVPQGSALSPLLF 592
KL G+ +++L NR+F ++ S+ + +++GVPQGS PLLF
Sbjct: 839 KLAKFGLDSLTCSWYKEFLENRTFSVKINKFVSKNSYPISSGVPQGSVSGPLLF 892
>U40030-6|AAA81135.3| 431|Caenorhabditis elegans Hypothetical
protein T13C2.3a protein.
Length = 431
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 459 TGSCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPP-SPRYYSXLYINDIPRSPET 632
T + +S TT T ++ + P T+ PE K PP P+ Y I+ + R +T
Sbjct: 320 TSTTTSTTTTTTTTTTEEPTTTTTSAPTTTTPEPSKYPPLPPQIYRPRPIDQMKRRKQT 378
>U40030-5|AAR12976.2| 506|Caenorhabditis elegans Hypothetical
protein T13C2.3b protein.
Length = 506
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +3
Query: 459 TGSCSSYETTCRTVRSDIESRERVPGPVTSQPESRKAPP-SPRYYSXLYINDIPRSPET 632
T + +S TT T ++ + P T+ PE K PP P+ Y I+ + R +T
Sbjct: 395 TSTTTSTTTTTTTTTTEEPTTTTTSAPTTTTPEPSKYPPLPPQIYRPRPIDQMKRRKQT 453
>Z83316-4|CAB54187.3| 1050|Caenorhabditis elegans Hypothetical
protein B0379.3b protein.
Length = 1050
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +1
Query: 157 NRELPPHQSPPGDRQTLRTAPS*TPLGLRIRE*NSYRRAVWIPRQTLVRP 306
NR LP H +PP Q + P+ P+ + + NS+ A +IP+Q +P
Sbjct: 693 NRRLPSHPAPPPVNQ---SQPANQPMQTAVYQ-NSHPGAPYIPQQPTYQP 738
>Z83316-3|CAB05895.3| 1054|Caenorhabditis elegans Hypothetical
protein B0379.3a protein.
Length = 1054
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +1
Query: 157 NRELPPHQSPPGDRQTLRTAPS*TPLGLRIRE*NSYRRAVWIPRQTLVRP 306
NR LP H +PP Q + P+ P+ + + NS+ A +IP+Q +P
Sbjct: 697 NRRLPSHPAPPPVNQ---SQPANQPMQTAVYQ-NSHPGAPYIPQQPTYQP 742
>U00034-1|AAA50639.2| 566|Caenorhabditis elegans Pim (mammalian
oncogene) relatedkinase protein 1, isoform a protein.
Length = 566
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +3
Query: 486 TCRTVRSDIESRERVPGPVTSQPESRKAPPSPRYYSXLYINDIPRSPETIWRSSR*HRHL 665
TC++ S+ E + V S + P SPR S +PRS +++ R SR HR L
Sbjct: 484 TCQSTYSNDED-VTISEKVVSPAQPLPPPLSPRKGSLQCFESVPRSRDSVIRMSR-HRPL 541
>AC090999-1|AAK26146.1| 390|Caenorhabditis elegans Hypothetical
protein Y82E9BR.8 protein.
Length = 390
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = -1
Query: 588 SNGERAEPCGTPAVT*RGRER 526
S GER +PCGTP G E+
Sbjct: 58 STGERTDPCGTPHTAFLGSEK 78
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 153 TKPRVTAPSVSSRR*ANFTNGSFVNASGTSYPRIKFL*TSSL--DSAPDTRASIK 311
T P V+ S + + T F NASG YP++K+ SL DS R S+K
Sbjct: 3857 TPPVVSVKSDNPIKALGETITLFCNASGNPYPQLKWAKGGSLIFDSPDGARISLK 3911
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 153 TKPRVTAPSVSSRR*ANFTNGSFVNASGTSYPRIKFL*TSSL--DSAPDTRASIK 311
T P V+ S + + T F NASG YP++K+ SL DS R S+K
Sbjct: 3857 TPPVVSVKSDNPIKALGETITLFCNASGNPYPQLKWAKGGSLIFDSPDGARISLK 3911
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 153 TKPRVTAPSVSSRR*ANFTNGSFVNASGTSYPRIKFL*TSSL--DSAPDTRASIK 311
T P V+ S + + T F NASG YP++K+ SL DS R S+K
Sbjct: 3857 TPPVVSVKSDNPIKALGETITLFCNASGNPYPQLKWAKGGSLIFDSPDGARISLK 3911
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 153 TKPRVTAPSVSSRR*ANFTNGSFVNASGTSYPRIKFL*TSSL--DSAPDTRASIK 311
T P V+ S + + T F NASG YP++K+ SL DS R S+K
Sbjct: 3857 TPPVVSVKSDNPIKALGETITLFCNASGNPYPQLKWAKGGSLIFDSPDGARISLK 3911
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 142 QTEERNRELPPHQSPPGDRQT 204
+ EER RE PP + PP RQT
Sbjct: 635 EDEERVREPPPKRPPPPHRQT 655
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 292 TLVRPSSAPPHGAHLTRAEQAETHSDRSPLLRYS 393
T RP+S+P H AE A H+++S + ++
Sbjct: 107 TAYRPASSPAPANHPVHAENAREHAEKSKVFTHN 140
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 292 TLVRPSSAPPHGAHLTRAEQAETHSDRSPLLRYS 393
T RP+S+P H AE A H+++S + ++
Sbjct: 226 TAYRPASSPAPANHPVHAENAREHAEKSKVFTHN 259
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 97 RGVERSGRYRHTQAGQTEERNRELPPHQSPP 189
R VER + + +A Q + R E PP Q P
Sbjct: 1085 RAVERENQIKMMRAQQLQRRQEEAPPPQQAP 1115
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +3
Query: 153 TKPRVTAPSVSSRR*ANFTNGSFVNASGTSYPRIKFL*TSSL--DSAPDTRASIK 311
T P V+ S + + T F NASG YP++K+ SL DS R S+K
Sbjct: 3857 TPPVVSVKSDNPIKALGETITLFCNASGNPYPQLKWAKGGSLIFDSPDGARISLK 3911
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,860,200
Number of Sequences: 27780
Number of extensions: 421430
Number of successful extensions: 1431
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1425
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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