Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_G21
(831 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 40 3e-05
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 40 3e-05
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 40 4e-05
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 39 5e-05
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 39 7e-05
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 38 1e-04
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 37 3e-04
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 36 5e-04
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 36 6e-04
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 35 8e-04
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 35 8e-04
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 35 0.001
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 35 0.001
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 35 0.001
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 35 0.001
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 33 0.003
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 33 0.003
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 33 0.003
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 33 0.004
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 32 0.007
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 32 0.007
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 32 0.007
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.010
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 31 0.010
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 31 0.013
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.017
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 30 0.023
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 30 0.023
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 29 0.053
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 27 0.21
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 39.9 bits (89), Expect = 3e-05
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Frame = +1
Query: 352 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 522
ER+WRPD N + + R+S +G + + RL I M+L N+P D Q
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 523 TC 528
+C
Sbjct: 175 SC 176
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 39.9 bits (89), Expect = 3e-05
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 4/70 (5%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDNWP 510
V S+ +WRPD+VL N A G+Y + +A V +G V W + S+ ++ +P
Sbjct: 105 VPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 511 NDMQTCTVQV 540
D+QTC +++
Sbjct: 162 YDVQTCVLKL 171
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 39.5 bits (88), Expect = 4e-05
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 343 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 519
V S+ +WRPD+VL NA A +A + + G V W + + ++ +P D
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 520 QTCTVQ 537
QTC ++
Sbjct: 165 QTCVLK 170
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 39.1 bits (87), Expect = 5e-05
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 343 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 519
V S+ +WRPD+VL NA A +A ++ G V W + + ++ +P D
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 520 QTCTVQ 537
QTC ++
Sbjct: 161 QTCVMK 166
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 38.7 bits (86), Expect = 7e-05
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +1
Query: 349 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 519
+E++W PD N + D R R+S +GSV++ R + M L +P D
Sbjct: 113 AEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDS 172
Query: 520 QTCTVQV 540
Q CTV++
Sbjct: 173 QNCTVEI 179
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 37.9 bits (84), Expect = 1e-04
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +1
Query: 352 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDNWPNDM 519
+++W+PD+VL N A G+Y +R + + NG V W+ + ++ + +P D
Sbjct: 106 DKVWKPDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 520 QTCTVQ 537
QTC ++
Sbjct: 163 QTCIMK 168
Score = 24.6 bits (51), Expect = 1.1
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
Frame = +3
Query: 231 NIRESESTVRVQADLQMNWIDKRLSWNA---GGVGLQHL 338
N+ E ++ L+ W D +L W+ GG+G+ L
Sbjct: 65 NVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRL 103
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 36.7 bits (81), Expect = 3e-04
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = +1
Query: 319 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISM 492
E+G T L V SE +W PD+VL N A G + +A + G V W + +
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEI 147
Query: 493 QLDNWPNDMQTC 528
+ +P D QTC
Sbjct: 148 DVRYFPFDQQTC 159
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 35.9 bits (79), Expect = 5e-04
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Frame = +1
Query: 325 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 492
G V SE +W PD+VL N A G+Y + +A + G VSW + +
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEI 160
Query: 493 QLDNWPNDMQTCTVQ 537
++ +P D Q+C ++
Sbjct: 161 NVEYFPFDEQSCIMK 175
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 35.5 bits (78), Expect = 6e-04
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +1
Query: 355 RLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQT 525
R+W+PD N + T R+ +G V + RL I M L+N+P D Q
Sbjct: 84 RIWKPDTYFYNGKHSYLHTITSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQR 143
Query: 526 CTVQ 537
C +Q
Sbjct: 144 CPLQ 147
Score = 32.3 bits (70), Expect = 0.006
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +3
Query: 120 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTPHLRHAN-IRESESTVRVQADLQMNW 287
N +++S ++D+LL YD PD V + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 288 IDKRLSWNAG 317
+D+RL++ G
Sbjct: 62 VDRRLAFQGG 71
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 35.1 bits (77), Expect = 8e-04
Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
Frame = +1
Query: 325 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 492
G T V SE +W PD+VL N A G+Y + +A + + G V W + +
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 147
Query: 493 QLDNWPNDMQTC 528
++ +P D QTC
Sbjct: 148 DVEYFPFDEQTC 159
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 35.1 bits (77), Expect = 8e-04
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDNWPND 516
V R+WRPD +L N A + VS+ G V W+ + + ++ +P D
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
Query: 517 MQTCTVQ 537
Q C ++
Sbjct: 142 EQRCVLK 148
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 34.7 bits (76), Expect = 0.001
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Frame = +1
Query: 325 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 477
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 478 TPISMQLDNWPNDMQTCTVQV 540
M L +P D Q C +++
Sbjct: 136 ASCPMNLQYFPMDRQLCHIEI 156
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 34.7 bits (76), Expect = 0.001
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Frame = +1
Query: 325 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 477
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 79 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 135
Query: 478 TPISMQLDNWPNDMQTCTVQV 540
M L +P D Q C +++
Sbjct: 136 ASCPMNLQYFPMDRQLCHIEI 156
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 34.7 bits (76), Expect = 0.001
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 519
+ RLW+PDV++ N+A G Y V NNG+ ++ + + + +P D
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 520 QTCTVQ 537
Q C ++
Sbjct: 160 QRCEMK 165
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 34.7 bits (76), Expect = 0.001
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Frame = +1
Query: 325 GCSTWLVSSE---RLWRPDVVLLNAA------ATTAGDYALRARVSNNGSVSWIKRLDIS 477
G T V SE +W PD +N ATT+ ++ R+ ++GS++ RL I+
Sbjct: 18 GVETLSVGSEFIKNIWVPDTFFVNEKQSYFHIATTSNEFI---RIHHSGSITRSIRLTIT 74
Query: 478 TPISMQLDNWPNDMQTCTVQV 540
M L +P D Q C +++
Sbjct: 75 ASCPMNLQYFPMDRQLCHIEI 95
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 33.1 bits (72), Expect = 0.003
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = +3
Query: 114 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTPHLRHANIRESESTVRVQADLQ 278
C++ TS S + L YDRD P+ K ++ ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 279 MNWIDKRLSWNA 314
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
Score = 26.6 bits (56), Expect = 0.28
Identities = 18/71 (25%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAAATTAGDY---ALRARVSNNGSVSWIKRLDISTPISMQLDN--W 507
V S +W PD+V+ ++ + D ++ V N+G++ + TP+ + D+ W
Sbjct: 110 VKSYEIWVPDIVM-HSVTSVGIDLEMPSVECIVFNSGTILCVP-FTTYTPVC-EYDHTWW 166
Query: 508 PNDMQTCTVQV 540
P D+ CT+ +
Sbjct: 167 PYDILNCTIHI 177
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 33.1 bits (72), Expect = 0.003
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 519
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 520 QTCTVQ 537
Q C ++
Sbjct: 191 QHCDMK 196
Score = 25.8 bits (54), Expect = 0.49
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NIRESESTVRVQADLQMNWIDKRLSWNAGGVG 326
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 33.1 bits (72), Expect = 0.003
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 519
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 520 QTCTVQ 537
Q C ++
Sbjct: 191 QHCDMK 196
Score = 25.8 bits (54), Expect = 0.49
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NIRESESTVRVQADLQMNWIDKRLSWNAGGVG 326
++ E + A L++ W+D L WN G
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 124
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 32.7 bits (71), Expect = 0.004
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 519
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 520 QTCTVQ 537
Q C ++
Sbjct: 123 QHCDMK 128
Score = 25.8 bits (54), Expect = 0.49
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NIRESESTVRVQADLQMNWIDKRLSWNAGGVG 326
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 31.9 bits (69), Expect = 0.007
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 519
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDD 122
Query: 520 QTCTVQ 537
Q C ++
Sbjct: 123 QHCDMK 128
Score = 25.8 bits (54), Expect = 0.49
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NIRESESTVRVQADLQMNWIDKRLSWNAGGVG 326
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 31.9 bits (69), Expect = 0.007
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +1
Query: 340 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWP 510
L + R+W PD+ N + + R+ NGSV + R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 511 NDMQTCTVQV 540
D Q C++++
Sbjct: 169 LDRQVCSLRM 178
Score = 27.5 bits (58), Expect = 0.16
Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Frame = +3
Query: 60 ILFWLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP------DSKIVVNLTPHL 221
+L L FLL + + + ++D++L YD P D VV + +
Sbjct: 8 LLVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAVVRVNIFV 67
Query: 222 RH-ANIRESESTVRVQADLQMNWIDKRLSWNAGGVGLQHL 338
R + I + VQ + W+D+RL +N G L++L
Sbjct: 68 RSISKIDDVTMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 31.9 bits (69), Expect = 0.007
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +1
Query: 340 LVSSERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDNWP 510
L + R+W PD+ N + + R+ NGSV + R+ ++ M L +P
Sbjct: 109 LTDASRVWMPDLFFSNEKEGHFHNIIMPNVYIRIFPNGSVLYSIRISLTLSCPMNLKLYP 168
Query: 511 NDMQTCTVQV 540
D Q C++++
Sbjct: 169 LDRQVCSLRM 178
Score = 29.5 bits (63), Expect = 0.040
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 7/100 (7%)
Frame = +3
Query: 60 ILFWLPFLLTCAIASAAECENATSLSLMIDSLLATYDRDSPP------DSKIVVNLTPHL 221
+L L FLL + + + ++D++L YD P D +V + +
Sbjct: 8 LLVLLTFLLHPSRCTQGKVNYREKEKEVLDNILGGYDARIRPSGENATDGPAIVRVNLFV 67
Query: 222 RH-ANIRESESTVRVQADLQMNWIDKRLSWNAGGVGLQHL 338
R A I + + VQ + W+D+RL +N G L++L
Sbjct: 68 RSIATISDIKMEYSVQLTFREQWLDERLRFNDFGGRLKYL 107
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 31.5 bits (68), Expect = 0.010
Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 519
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDD 122
Query: 520 QTCTVQ 537
Q C ++
Sbjct: 123 QHCDMK 128
Score = 25.8 bits (54), Expect = 0.49
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NIRESESTVRVQADLQMNWIDKRLSWNAGGVG 326
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 31.5 bits (68), Expect = 0.010
Identities = 13/64 (20%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +1
Query: 358 LWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTC 528
+WRPD NA T + ++ + ++ ++ ++ +L + +M+ +++P+D Q C
Sbjct: 87 IWRPDCFFKNAKKVTFHEMSIPNHYLWLYHDKTLLYMSKLTLVLSCAMKFESYPHDTQIC 146
Query: 529 TVQV 540
++ +
Sbjct: 147 SMMI 150
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 31.1 bits (67), Expect = 0.013
Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPN 513
V S+ +W PD+ + N+ T G V ++GSVS + + + +WP
Sbjct: 119 VKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPY 178
Query: 514 DMQTCTV 534
D C +
Sbjct: 179 DTHRCRI 185
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 30.7 bits (66), Expect = 0.017
Identities = 15/66 (22%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 519
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 520 QTCTVQ 537
Q C ++
Sbjct: 123 QHCDMK 128
Score = 25.8 bits (54), Expect = 0.49
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NIRESESTVRVQADLQMNWIDKRLSWNAGGVG 326
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 30.3 bits (65), Expect = 0.023
Identities = 15/66 (22%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 519
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDD 122
Query: 520 QTCTVQ 537
Q C ++
Sbjct: 123 QHCDMK 128
Score = 25.8 bits (54), Expect = 0.49
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NIRESESTVRVQADLQMNWIDKRLSWNAGGVG 326
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 30.3 bits (65), Expect = 0.023
Identities = 15/66 (22%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +1
Query: 343 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDM 519
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDD 122
Query: 520 QTCTVQ 537
Q C ++
Sbjct: 123 QHCDMK 128
Score = 25.8 bits (54), Expect = 0.49
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 231 NIRESESTVRVQADLQMNWIDKRLSWNAGGVG 326
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 29.1 bits (62), Expect = 0.053
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Frame = +1
Query: 352 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDNWPND 516
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 517 MQTCTVQV 540
+Q C + +
Sbjct: 127 IQICPIYI 134
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 27.1 bits (57), Expect = 0.21
Identities = 14/66 (21%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Frame = +1
Query: 352 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDNWPNDMQ 522
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D Q
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 523 TCTVQV 540
C +Q+
Sbjct: 176 ECKLQM 181
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,822
Number of Sequences: 438
Number of extensions: 4968
Number of successful extensions: 61
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26581563
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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