Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_FL5_G09
         (787 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0110 + 25914110-25915006,25915726-25915797,25916411-259166...    32   0.45 
05_01_0142 - 940421-940701,941262-941574                               30   2.4  
04_04_1046 + 30405805-30405858,30405991-30407950,30408460-30408476     30   2.4  
03_03_0118 + 14597863-14597929,14598844-14599806,14599909-145999...    30   2.4  
09_04_0081 - 14400293-14400397,14400953-14401036,14401144-144012...    29   5.5  
12_02_0299 - 17051570-17052474,17053542-17053755                       24   6.5  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    28   7.3  

>02_05_0110 +
           25914110-25915006,25915726-25915797,25916411-25916699,
           25916864-25916949,25917267-25917490,25917674-25917740,
           25917830-25917889,25917995-25918078,25918475-25918555
          Length = 619

 Score = 32.3 bits (70), Expect = 0.45
 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -1

Query: 163 LDDEAFGYL-KRVIVTPAVYPRLLEFLHVDIQSTGQEITL 47
           LDDE   YL  R  V   +  RLL+F++VD  STG  + L
Sbjct: 279 LDDEDISYLTNRAAVYIEMGKRLLKFIYVDPSSTGSSVIL 318


>05_01_0142 - 940421-940701,941262-941574
          Length = 197

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 13/37 (35%), Positives = 15/37 (40%)
 Frame = +3

Query: 432 GGPGFXPPXXXXXXGXNPPPXXNPPXFXXXXPPXGGF 542
           GG G+ P       G  PPP   PP      PP G +
Sbjct: 25  GGHGYPPHQGYPPQGYPPPPGAYPPPPGAYPPPPGAY 61


>04_04_1046 + 30405805-30405858,30405991-30407950,30408460-30408476
          Length = 676

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 18/66 (27%), Positives = 20/66 (30%), Gaps = 1/66 (1%)
 Frame = +3

Query: 345 PPTSLKNPIXXGXKXXXGGXKXAPXXXFXGGPG-FXPPXXXXXXGXNPPPXXNPPXFXXX 521
           PP    N I              P     G    + PP         PPP  NPP +   
Sbjct: 443 PPRRALNRINSSSTYSSSSCPPEPTSSTSGSTSSWVPPRDNASSWAPPPPRGNPPSWVPL 502

Query: 522 XPPXGG 539
            PP GG
Sbjct: 503 PPPPGG 508


>03_03_0118 +
           14597863-14597929,14598844-14599806,14599909-14599936,
           14600288-14600666
          Length = 478

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
 Frame = -1

Query: 538 PPXGGFXXXKXGGF-XXGGGFXPXXXFXXGGKNPGP 434
           PP GGF     GGF     GF P   F   G + GP
Sbjct: 406 PPAGGFGTPPLGGFGTPPSGFGPPGSFNGSGSSFGP 441


>09_04_0081 -
           14400293-14400397,14400953-14401036,14401144-14401214,
           14401293-14401380,14401487-14401678,14401772-14402704
          Length = 490

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 13/35 (37%), Positives = 13/35 (37%)
 Frame = +3

Query: 435 GPGFXPPXXXXXXGXNPPPXXNPPXFXXXXPPXGG 539
           GPG  PP         PPP   PP      PP  G
Sbjct: 135 GPGQEPPPPHVPKAAPPPPPPPPPHAPPGPPPTKG 169


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 24.2 bits (50), Expect(2) = 6.5
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = +2

Query: 482 PPPPXKPPXFXXXKXPXXGFFXGXP 556
           PPPP  PP F     P    F   P
Sbjct: 325 PPPPPPPPSFPWPFPPLAPLFPPYP 349



 Score = 22.6 bits (46), Expect(2) = 6.5
 Identities = 8/18 (44%), Positives = 8/18 (44%)
 Frame = +2

Query: 452 PPXKXXXXXKPPPPXKPP 505
           PP        PPPP  PP
Sbjct: 311 PPLPSFYPSPPPPPPPPP 328


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 16/45 (35%), Positives = 16/45 (35%)
 Frame = +3

Query: 396 GGXKXAPXXXFXGGPGFXPPXXXXXXGXNPPPXXNPPXFXXXXPP 530
           GG    P      GP   PP      G  PPP   PP F    PP
Sbjct: 16  GGFPPQPPPMNPYGP---PPPQQPAYGHMPPPQGAPPPFLAPPPP 57


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,602,658
Number of Sequences: 37544
Number of extensions: 298970
Number of successful extensions: 1132
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 774
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)