Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_FL5_G09
         (787 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF039048-6|AAB94235.1|   91|Caenorhabditis elegans Hypothetical ...    29   2.9  
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr...    29   5.0  
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    29   5.0  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    29   5.0  
AL032652-4|CAB63398.1|  486|Caenorhabditis elegans Hypothetical ...    29   5.0  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    29   5.0  

>AF039048-6|AAB94235.1|   91|Caenorhabditis elegans Hypothetical
           protein F16B4.4 protein.
          Length = 91

 Score = 29.5 bits (63), Expect = 2.9
 Identities = 14/31 (45%), Positives = 14/31 (45%)
 Frame = -1

Query: 529 GGFXXXKXGGFXXGGGFXPXXXFXXGGKNPG 437
           GG      GGF  GGGF     F  GG N G
Sbjct: 50  GGSQFGGDGGFQQGGGFQQGGQFQQGGFNQG 80


>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
           protein C01G8.9a protein.
          Length = 1724

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 18/68 (26%), Positives = 23/68 (33%), Gaps = 2/68 (2%)
 Frame = +3

Query: 345 PPTSLKNPIXXGXKXXXGGXKXAPXXX--FXGGPGFXPPXXXXXXGXNPPPXXNPPXFXX 518
           PPTS++ P          G          + G PG+ PP          PP   P  +  
Sbjct: 701 PPTSVQPPQPQQPPQGPPGPPGPQQHPGPYPGYPGYGPPGAMRPPAGFAPPPGAPYGYPP 760

Query: 519 XXPPXGGF 542
             PP  GF
Sbjct: 761 GAPPPAGF 768


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 3/43 (6%)
 Frame = +3

Query: 432 GGPGFXPPXXXXXXGXNPPPXXNPPXF---XXXXPPXGGFXGG 551
           G P   PP         PPP   PP         PP GGF GG
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 3/43 (6%)
 Frame = +3

Query: 432 GGPGFXPPXXXXXXGXNPPPXXNPPXF---XXXXPPXGGFXGG 551
           G P   PP         PPP   PP         PP GGF GG
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783


>AL032652-4|CAB63398.1|  486|Caenorhabditis elegans Hypothetical
           protein Y63D3A.5 protein.
          Length = 486

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 15/51 (29%), Positives = 17/51 (33%)
 Frame = +2

Query: 341 FPPXLP*KPNXXXXKXXPGGGKTGXXXXIXGXPGVFXPPXKXXXXXKPPPP 493
           + P  P  P        P GG  G      G PG + PP         PPP
Sbjct: 409 YGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPP 459



 Score = 27.9 bits (59), Expect = 8.7
 Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
 Frame = +3

Query: 432 GGPG-FXPPXXXXXXGXNPPPXXNPPXFXXXXPPXGGFXGG 551
           GGPG F PP         PPP   PP      P   G  GG
Sbjct: 428 GGPGGFGPPPPGGPGAYGPPPTGFPP-VGAPPPGAAGAPGG 467


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 16/43 (37%), Positives = 16/43 (37%), Gaps = 3/43 (6%)
 Frame = +3

Query: 432 GGPGFXPPXXXXXXGXNPPPXXNPPXF---XXXXPPXGGFXGG 551
           G P   PP         PPP   PP         PP GGF GG
Sbjct: 324 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,529,694
Number of Sequences: 27780
Number of extensions: 213230
Number of successful extensions: 623
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 559
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1903721438
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)