BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_G07
(869 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT022850-1|AAY55266.1| 538|Drosophila melanogaster IP13040p pro... 40 0.004
AE013599-1243|AAF58688.1| 610|Drosophila melanogaster CG13214-P... 40 0.004
AE014297-116|AAF52115.2| 559|Drosophila melanogaster CG12586-PA... 38 0.024
AY119147-1|AAM51007.1| 1209|Drosophila melanogaster RE53611p pro... 35 0.17
AL024484-6|CAA19668.1| 530|Drosophila melanogaster EG:96G10.7 p... 35 0.17
AE014298-503|AAN09599.1| 1209|Drosophila melanogaster CG32498-PO... 35 0.17
AE014298-502|AAF45858.3| 1209|Drosophila melanogaster CG32498-PB... 35 0.17
BT022701-1|AAY55117.1| 157|Drosophila melanogaster IP07196p pro... 33 0.68
AE014297-1019|AAN13441.1| 157|Drosophila melanogaster CG31415-P... 33 0.68
AY060485-1|AAL25524.1| 696|Drosophila melanogaster SD09360p pro... 32 1.2
AE014298-2787|AAF48900.2| 2030|Drosophila melanogaster CG32542-P... 32 1.2
AF017777-12|AAC28405.1| 145|Drosophila melanogaster la costa pr... 31 1.6
AE014298-3140|AAF50816.1| 145|Drosophila melanogaster CG12794-P... 31 1.6
BT016106-1|AAV36991.1| 840|Drosophila melanogaster LD20133p pro... 31 2.1
AE014298-1168|AAF46366.1| 926|Drosophila melanogaster CG10555-P... 31 2.1
U02042-1|AAA19249.1| 606|Drosophila melanogaster GABA receptor ... 30 4.8
M69057-3|AAA28558.1| 595|Drosophila melanogaster GABA-alpha rec... 30 4.8
M69057-2|AAA28557.1| 601|Drosophila melanogaster GABA-alpha rec... 30 4.8
M69057-1|AAA28556.1| 606|Drosophila melanogaster GABA-alpha rec... 30 4.8
AY118673-1|AAM50533.1| 1436|Drosophila melanogaster AT03687p pro... 30 4.8
AE014296-1598|AAN11989.1| 585|Drosophila melanogaster CG10537-P... 30 4.8
AE014296-1597|AAF50311.1| 606|Drosophila melanogaster CG10537-P... 30 4.8
AE014296-1596|AAN11988.1| 606|Drosophila melanogaster CG10537-P... 30 4.8
AE014134-551|AAF51149.1| 2409|Drosophila melanogaster CG3524-PA ... 29 6.3
M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collag... 29 8.3
M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type I... 29 8.3
J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV pro-co... 29 8.3
AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,... 29 8.3
AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,... 29 8.3
AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,... 29 8.3
AE014134-552|AAF51148.1| 2438|Drosophila melanogaster CG3523-PA ... 29 8.3
AE013599-3536|AAF46950.1| 344|Drosophila melanogaster CG9888-PA... 29 8.3
>BT022850-1|AAY55266.1| 538|Drosophila melanogaster IP13040p
protein.
Length = 538
Score = 39.9 bits (89), Expect = 0.004
Identities = 46/174 (26%), Positives = 50/174 (28%), Gaps = 5/174 (2%)
Frame = -2
Query: 778 GXGAGPXGRXXGGGXXPXXLXEXXXAAXXRXGRXXXXHPXXGGRPXGGXXPRDXGEPEXX 599
G G G GGG A G GG GG G P
Sbjct: 334 GQGGAGGGYGGGGGRGGGGAPGAPGAPGSPGGGGFGGQGGGGGFGGGGGRGGAPGAPGSP 393
Query: 598 XGXGXRGXXXXLXXGXXXXXXGXPGXPXXXGGP--XXRXGPTPXXXXXGRG--XGPXGGX 431
G G G G G PG P GG + G GRG G GG
Sbjct: 394 GGGGFGGQGGGGGYGGGAGRGGAPGAPGSPGGGGFGGQGGGGGFGAGGGRGGAGGAPGGP 453
Query: 430 GA-GGXXKXKPRARXXGXPGVXCXPXLSSNQVRPPTSVPRTPAQVLQPHXPCVP 272
G+ GG G G P L NQ PP + P +P VP
Sbjct: 454 GSPGGPGYGGGAGGPGGAGGRPGGPGLPGNQYVPPAAGGGAPGSPGRPGSGGVP 507
Score = 36.7 bits (81), Expect = 0.042
Identities = 33/118 (27%), Positives = 34/118 (28%)
Frame = -2
Query: 772 GAGPXGRXXGGGXXPXXLXEXXXAAXXRXGRXXXXHPXXGGRPXGGXXPRDXGEPEXXXG 593
G G G G G P G + GGR GG P G P G
Sbjct: 307 GGGGFGGGGGRGGAPGAPGSPGGGGYGGQGGAGGGYGGGGGR-GGGGAPGAPGAPGSPGG 365
Query: 592 XGXRGXXXXLXXGXXXXXXGXPGXPXXXGGPXXRXGPTPXXXXXGRGXGPXGGXGAGG 419
G G G G PG P GG G G G G G GA G
Sbjct: 366 GGFGGQGGGGGFGGGGGRGGAPGAPGSPGG--GGFGGQGGGGGYGGGAGRGGAPGAPG 421
Score = 33.9 bits (74), Expect = 0.29
Identities = 32/118 (27%), Positives = 33/118 (27%), Gaps = 5/118 (4%)
Frame = -2
Query: 655 GGRPXGGXXPRDXGEPEXXXGXGXRGXXXXLXXGXXXXXXGXPGXPXXXGGPXXRXGPTP 476
GG G P G P G G G G PG P GGP G
Sbjct: 408 GGGAGRGGAPGAPGSPGGGGFGGQGGGGGFGAGGGRGGAGGAPGGPGSPGGPGYGGG--- 464
Query: 475 XXXXXGRGXGPXGGXGAGGXXKXKPRA-----RXXGXPGVXCXPXLSSNQVRPPTSVP 317
G G GG G G P A G PG P S + P P
Sbjct: 465 -AGGPGGAGGRPGGPGLPGNQYVPPAAGGGAPGSPGRPGSGGVPGTGSQYIPPAPGAP 521
Score = 31.9 bits (69), Expect = 1.2
Identities = 30/118 (25%), Positives = 31/118 (26%)
Frame = -2
Query: 772 GAGPXGRXXGGGXXPXXLXEXXXAAXXRXGRXXXXHPXXGGRPXGGXXPRDXGEPEXXXG 593
G G G GGG + G GG G P G P
Sbjct: 175 GGGGGGSGYGGGSGFGGGGAGGGSGGGGGGAGGGGGYGSGGGSGRGGAPGGPGAPGGGGF 234
Query: 592 XGXRGXXXXLXXGXXXXXXGXPGXPXXXGGPXXRXGPTPXXXXXGRGXGPXGGXGAGG 419
G G G G PG P GG G G G GG GA G
Sbjct: 235 GGQGGGGGYGGAGGGAGRGGSPGGPGSPGGGGFGGQGGAGGGYGGGGGGGRGGGGAPG 292
Score = 31.1 bits (67), Expect = 2.1
Identities = 32/121 (26%), Positives = 33/121 (27%), Gaps = 1/121 (0%)
Frame = -2
Query: 778 GXGAGPXGRXXGGGXXPXXLXEXXXAAXXRXGRXXXXHPXXGGRPXGGXX-PRDXGEPEX 602
G G G G G G P G + GG GG P G P
Sbjct: 240 GGGYGGAGGGAGRGGSPGGPGSPGGGGFGGQGGAGGGYGGGGGGGRGGGGAPGAPGSPGG 299
Query: 601 XXGXGXRGXXXXLXXGXXXXXXGXPGXPXXXGGPXXRXGPTPXXXXXGRGXGPXGGXGAG 422
G G G G PG P GG G G G G G GA
Sbjct: 300 GGFGGQGGGGGFGGGGGRGGAPGAPGSP--GGGGYGGQGGAGGGYGGGGGRGGGGAPGAP 357
Query: 421 G 419
G
Sbjct: 358 G 358
Score = 29.5 bits (63), Expect = 6.3
Identities = 28/94 (29%), Positives = 29/94 (30%)
Frame = -2
Query: 655 GGRPXGGXXPRDXGEPEXXXGXGXRGXXXXLXXGXXXXXXGXPGXPXXXGGPXXRXGPTP 476
GG G P G P G G G G PG P G P
Sbjct: 312 GGGGGRGGAPGAPGSPGGGGYGGQGGAGGGYGGGGGRGGGGAPGAPGAPGSPGG------ 365
Query: 475 XXXXXGRGXGPXGGXGAGGXXKXKPRARXXGXPG 374
G+G G GG G GG P A G PG
Sbjct: 366 -GGFGGQGGG--GGFGGGGGRGGAPGA--PGSPG 394
>AE013599-1243|AAF58688.1| 610|Drosophila melanogaster CG13214-PA,
isoform A protein.
Length = 610
Score = 39.9 bits (89), Expect = 0.004
Identities = 46/174 (26%), Positives = 50/174 (28%), Gaps = 5/174 (2%)
Frame = -2
Query: 778 GXGAGPXGRXXGGGXXPXXLXEXXXAAXXRXGRXXXXHPXXGGRPXGGXXPRDXGEPEXX 599
G G G GGG A G GG GG G P
Sbjct: 406 GQGGAGGGYGGGGGRGGGGAPGAPGAPGSPGGGGFGGQGGGGGFGGGGGRGGAPGAPGSP 465
Query: 598 XGXGXRGXXXXLXXGXXXXXXGXPGXPXXXGGP--XXRXGPTPXXXXXGRG--XGPXGGX 431
G G G G G PG P GG + G GRG G GG
Sbjct: 466 GGGGFGGQGGGGGYGGGAGRGGAPGAPGSPGGGGFGGQGGGGGFGAGGGRGGAGGAPGGP 525
Query: 430 GA-GGXXKXKPRARXXGXPGVXCXPXLSSNQVRPPTSVPRTPAQVLQPHXPCVP 272
G+ GG G G P L NQ PP + P +P VP
Sbjct: 526 GSPGGPGYGGGAGGPGGAGGRPGGPGLPGNQYVPPAAGGGAPGSPGRPGSGGVP 579
Score = 36.7 bits (81), Expect = 0.042
Identities = 33/118 (27%), Positives = 34/118 (28%)
Frame = -2
Query: 772 GAGPXGRXXGGGXXPXXLXEXXXAAXXRXGRXXXXHPXXGGRPXGGXXPRDXGEPEXXXG 593
G G G G G P G + GGR GG P G P G
Sbjct: 379 GGGGFGGGGGRGGAPGAPGSPGGGGYGGQGGAGGGYGGGGGR-GGGGAPGAPGAPGSPGG 437
Query: 592 XGXRGXXXXLXXGXXXXXXGXPGXPXXXGGPXXRXGPTPXXXXXGRGXGPXGGXGAGG 419
G G G G PG P GG G G G G G GA G
Sbjct: 438 GGFGGQGGGGGFGGGGGRGGAPGAPGSPGG--GGFGGQGGGGGYGGGAGRGGAPGAPG 493
Score = 33.9 bits (74), Expect = 0.29
Identities = 32/118 (27%), Positives = 33/118 (27%), Gaps = 5/118 (4%)
Frame = -2
Query: 655 GGRPXGGXXPRDXGEPEXXXGXGXRGXXXXLXXGXXXXXXGXPGXPXXXGGPXXRXGPTP 476
GG G P G P G G G G PG P GGP G
Sbjct: 480 GGGAGRGGAPGAPGSPGGGGFGGQGGGGGFGAGGGRGGAGGAPGGPGSPGGPGYGGG--- 536
Query: 475 XXXXXGRGXGPXGGXGAGGXXKXKPRA-----RXXGXPGVXCXPXLSSNQVRPPTSVP 317
G G GG G G P A G PG P S + P P
Sbjct: 537 -AGGPGGAGGRPGGPGLPGNQYVPPAAGGGAPGSPGRPGSGGVPGTGSQYIPPAPGAP 593
Score = 31.9 bits (69), Expect = 1.2
Identities = 30/118 (25%), Positives = 31/118 (26%)
Frame = -2
Query: 772 GAGPXGRXXGGGXXPXXLXEXXXAAXXRXGRXXXXHPXXGGRPXGGXXPRDXGEPEXXXG 593
G G G GGG + G GG G P G P
Sbjct: 247 GGGGGGSGYGGGSGFGGGGAGGGSGGGGGGAGGGGGYGSGGGSGRGGAPGGPGAPGGGGF 306
Query: 592 XGXRGXXXXLXXGXXXXXXGXPGXPXXXGGPXXRXGPTPXXXXXGRGXGPXGGXGAGG 419
G G G G PG P GG G G G GG GA G
Sbjct: 307 GGQGGGGGYGGAGGGAGRGGSPGGPGSPGGGGFGGQGGAGGGYGGGGGGGRGGGGAPG 364
Score = 31.1 bits (67), Expect = 2.1
Identities = 32/121 (26%), Positives = 33/121 (27%), Gaps = 1/121 (0%)
Frame = -2
Query: 778 GXGAGPXGRXXGGGXXPXXLXEXXXAAXXRXGRXXXXHPXXGGRPXGGXX-PRDXGEPEX 602
G G G G G G P G + GG GG P G P
Sbjct: 312 GGGYGGAGGGAGRGGSPGGPGSPGGGGFGGQGGAGGGYGGGGGGGRGGGGAPGAPGSPGG 371
Query: 601 XXGXGXRGXXXXLXXGXXXXXXGXPGXPXXXGGPXXRXGPTPXXXXXGRGXGPXGGXGAG 422
G G G G PG P GG G G G G G GA
Sbjct: 372 GGFGGQGGGGGFGGGGGRGGAPGAPGSP--GGGGYGGQGGAGGGYGGGGGRGGGGAPGAP 429
Query: 421 G 419
G
Sbjct: 430 G 430
Score = 29.5 bits (63), Expect = 6.3
Identities = 28/94 (29%), Positives = 29/94 (30%)
Frame = -2
Query: 655 GGRPXGGXXPRDXGEPEXXXGXGXRGXXXXLXXGXXXXXXGXPGXPXXXGGPXXRXGPTP 476
GG G P G P G G G G PG P G P
Sbjct: 384 GGGGGRGGAPGAPGSPGGGGYGGQGGAGGGYGGGGGRGGGGAPGAPGAPGSPGG------ 437
Query: 475 XXXXXGRGXGPXGGXGAGGXXKXKPRARXXGXPG 374
G+G G GG G GG P A G PG
Sbjct: 438 -GGFGGQGGG--GGFGGGGGRGGAPGA--PGSPG 466
>AE014297-116|AAF52115.2| 559|Drosophila melanogaster CG12586-PA
protein.
Length = 559
Score = 37.5 bits (83), Expect = 0.024
Identities = 26/78 (33%), Positives = 26/78 (33%)
Frame = -2
Query: 652 GRPXGGXXPRDXGEPEXXXGXGXRGXXXXLXXGXXXXXXGXPGXPXXXGGPXXRXGPTPX 473
GRP P G P G G G G PG P GGP GP
Sbjct: 380 GRPGAPGGPNGPGGPMGPGGPGGPGGPGG---PGGPGGPGGPGMPWGPGGPGGPGGPNGP 436
Query: 472 XXXXGRGXGPXGGXGAGG 419
G G GP G G GG
Sbjct: 437 GGPGGPG-GPGGPGGPGG 453
>AY119147-1|AAM51007.1| 1209|Drosophila melanogaster RE53611p
protein.
Length = 1209
Score = 34.7 bits (76), Expect = 0.17
Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = -2
Query: 460 GRGXGPXGGXGAGGXXKXKPRARXXGXPGVX---CXPXLSSNQVRPPTSVPRTPAQ 302
G G G G G K K +AR G C P P TS P+TPAQ
Sbjct: 63 GSGGGGCGSGSGSGSGKRKSKARTKCFGGTVFRCCLPCRGGGSAAPATSPPQTPAQ 118
>AL024484-6|CAA19668.1| 530|Drosophila melanogaster EG:96G10.7
protein.
Length = 530
Score = 34.7 bits (76), Expect = 0.17
Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = -2
Query: 460 GRGXGPXGGXGAGGXXKXKPRARXXGXPGVX---CXPXLSSNQVRPPTSVPRTPAQ 302
G G G G G K K +AR G C P P TS P+TPAQ
Sbjct: 70 GSGGGGCGSGSGSGSGKRKSKARTKCFGGTVFRCCLPCRGGGSAAPATSPPQTPAQ 125
>AE014298-503|AAN09599.1| 1209|Drosophila melanogaster CG32498-PO,
isoform O protein.
Length = 1209
Score = 34.7 bits (76), Expect = 0.17
Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = -2
Query: 460 GRGXGPXGGXGAGGXXKXKPRARXXGXPGVX---CXPXLSSNQVRPPTSVPRTPAQ 302
G G G G G K K +AR G C P P TS P+TPAQ
Sbjct: 63 GSGGGGCGSGSGSGSGKRKSKARTKCFGGTVFRCCLPCRGGGSAAPATSPPQTPAQ 118
>AE014298-502|AAF45858.3| 1209|Drosophila melanogaster CG32498-PB,
isoform B protein.
Length = 1209
Score = 34.7 bits (76), Expect = 0.17
Identities = 20/56 (35%), Positives = 22/56 (39%), Gaps = 3/56 (5%)
Frame = -2
Query: 460 GRGXGPXGGXGAGGXXKXKPRARXXGXPGVX---CXPXLSSNQVRPPTSVPRTPAQ 302
G G G G G K K +AR G C P P TS P+TPAQ
Sbjct: 63 GSGGGGCGSGSGSGSGKRKSKARTKCFGGTVFRCCLPCRGGGSAAPATSPPQTPAQ 118
>BT022701-1|AAY55117.1| 157|Drosophila melanogaster IP07196p
protein.
Length = 157
Score = 32.7 bits (71), Expect = 0.68
Identities = 24/79 (30%), Positives = 26/79 (32%), Gaps = 1/79 (1%)
Frame = -2
Query: 652 GRPXGGXXPRDXGEPEXXXGXGXRGXXXXLXXGXXXXXXGXPGXPXXXGG-PXXRXGPTP 476
G GG R G P+ G + G G P GG P R GP
Sbjct: 38 GAGGGGPGGRGGGPPQKRGTCGPKPCGGQQCNKCGKGGPGGRGGPGGKGGGPGGRNGPGG 97
Query: 475 XXXXXGRGXGPXGGXGAGG 419
GR P GG G GG
Sbjct: 98 SGGPGGRN-APNGGGGGGG 115
>AE014297-1019|AAN13441.1| 157|Drosophila melanogaster CG31415-PA
protein.
Length = 157
Score = 32.7 bits (71), Expect = 0.68
Identities = 24/79 (30%), Positives = 26/79 (32%), Gaps = 1/79 (1%)
Frame = -2
Query: 652 GRPXGGXXPRDXGEPEXXXGXGXRGXXXXLXXGXXXXXXGXPGXPXXXGG-PXXRXGPTP 476
G GG R G P+ G + G G P GG P R GP
Sbjct: 38 GAGGGGPGGRGGGPPQKRGTCGPKPCGGQQCNKCGKGGPGGRGGPGGKGGGPGGRNGPGG 97
Query: 475 XXXXXGRGXGPXGGXGAGG 419
GR P GG G GG
Sbjct: 98 SGGPGGRN-APNGGGGGGG 115
>AY060485-1|AAL25524.1| 696|Drosophila melanogaster SD09360p
protein.
Length = 696
Score = 31.9 bits (69), Expect = 1.2
Identities = 29/93 (31%), Positives = 35/93 (37%), Gaps = 3/93 (3%)
Frame = -2
Query: 535 GXPGXPXXXGGPXXRXGPTPXXXXXGR---GXGPXGGXGAGGXXKXKPRARXXGXPGVXC 365
G PG P G P GP P G G G G G G + + + P +
Sbjct: 428 GPPGPPM--GPPQGYYGPPPPPPPNGPPGVGVGVGVGVGVGVMPMRQHQHQHPVYPFMQQ 485
Query: 364 XPXLSSNQVRPPTSVPRTPAQVLQPHXPCVPTQ 266
P Q +PP S P P + QPH PTQ
Sbjct: 486 APPQPPQQQQPPPSQP--PVRQRQPH-QFTPTQ 515
>AE014298-2787|AAF48900.2| 2030|Drosophila melanogaster CG32542-PA
protein.
Length = 2030
Score = 31.9 bits (69), Expect = 1.2
Identities = 29/93 (31%), Positives = 35/93 (37%), Gaps = 3/93 (3%)
Frame = -2
Query: 535 GXPGXPXXXGGPXXRXGPTPXXXXXGR---GXGPXGGXGAGGXXKXKPRARXXGXPGVXC 365
G PG P G P GP P G G G G G G + + + P +
Sbjct: 1762 GPPGPPM--GPPQGYYGPPPPPPPNGPPGVGVGVGVGVGVGVMPMRQHQHQHPVYPFMQQ 1819
Query: 364 XPXLSSNQVRPPTSVPRTPAQVLQPHXPCVPTQ 266
P Q +PP S P P + QPH PTQ
Sbjct: 1820 APPQPPQQQQPPPSQP--PVRQRQPH-QFTPTQ 1849
>AF017777-12|AAC28405.1| 145|Drosophila melanogaster la costa
protein.
Length = 145
Score = 31.5 bits (68), Expect = 1.6
Identities = 25/80 (31%), Positives = 25/80 (31%), Gaps = 1/80 (1%)
Frame = -2
Query: 637 GXXPRDXGEPEXXXGXGX-RGXXXXLXXGXXXXXXGXPGXPXXXGGPXXRXGPTPXXXXX 461
G P G P G G RG G PG P GGP GP
Sbjct: 20 GPGPWGPGGPGGPGGPGRGRGGPGRGPGGPGGPGGRGPGGPGGPGGPGGPGGPGGPGGPG 79
Query: 460 GRGXGPXGGXGAGGXXKXKP 401
G G P G G GG P
Sbjct: 80 GPGC-PGGPGGPGGPKPWGP 98
Score = 30.7 bits (66), Expect = 2.7
Identities = 22/79 (27%), Positives = 23/79 (29%), Gaps = 4/79 (5%)
Frame = -1
Query: 686 GPXXRGAPXXGGXXXRRXXTPXRGRAXXXX----GXXXTGXXXXPRXRXXAXXXGXPRXP 519
GP G P G R P RG G G P G P P
Sbjct: 22 GPWGPGGPGGPGGPGRGRGGPGRGPGGPGGPGGRGPGGPGGPGGPGGPGGPGGPGGPGGP 81
Query: 518 XXXGGPXXPSGXDPXXRPA 462
GGP P G P P+
Sbjct: 82 GCPGGPGGPGGPKPWGPPS 100
Score = 29.9 bits (64), Expect = 4.8
Identities = 22/65 (33%), Positives = 22/65 (33%), Gaps = 2/65 (3%)
Frame = -2
Query: 664 PXXGGRPXGGXXPRDXGEPEXXXGXGXRGXXXXLXXGXXXXXXGX--PGXPXXXGGPXXR 491
P GR GG R G P G G G G G PG P GGP
Sbjct: 32 PGGPGRGRGGPG-RGPGGPGGPGGRGPGGPGGPGGPGGPGGPGGPGGPGGPGCPGGPGGP 90
Query: 490 XGPTP 476
GP P
Sbjct: 91 GGPKP 95
Score = 29.5 bits (63), Expect = 6.3
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = -2
Query: 535 GXPGXPXXXGGPXXRXGPTPXXXXXGRGXGPXGGXGAGGXXKXKPRARXXGXPGVXCXP 359
G PG P G R GP GRG G GG G G G PG P
Sbjct: 30 GGPGGPGRGRGGPGR-GPGGPGGPGGRGPGGPGGPGGPGGPGGPGGPGGPGGPGCPGGP 87
>AE014298-3140|AAF50816.1| 145|Drosophila melanogaster CG12794-PA
protein.
Length = 145
Score = 31.5 bits (68), Expect = 1.6
Identities = 25/80 (31%), Positives = 25/80 (31%), Gaps = 1/80 (1%)
Frame = -2
Query: 637 GXXPRDXGEPEXXXGXGX-RGXXXXLXXGXXXXXXGXPGXPXXXGGPXXRXGPTPXXXXX 461
G P G P G G RG G PG P GGP GP
Sbjct: 20 GPGPWGPGGPGGPGGPGRGRGGPGRGPGGPGGPGGRGPGGPGGPGGPGGPGGPGGPGGPG 79
Query: 460 GRGXGPXGGXGAGGXXKXKP 401
G G P G G GG P
Sbjct: 80 GPGC-PGGPGGPGGPKPWGP 98
Score = 30.7 bits (66), Expect = 2.7
Identities = 22/79 (27%), Positives = 23/79 (29%), Gaps = 4/79 (5%)
Frame = -1
Query: 686 GPXXRGAPXXGGXXXRRXXTPXRGRAXXXX----GXXXTGXXXXPRXRXXAXXXGXPRXP 519
GP G P G R P RG G G P G P P
Sbjct: 22 GPWGPGGPGGPGGPGRGRGGPGRGPGGPGGPGGRGPGGPGGPGGPGGPGGPGGPGGPGGP 81
Query: 518 XXXGGPXXPSGXDPXXRPA 462
GGP P G P P+
Sbjct: 82 GCPGGPGGPGGPKPWGPPS 100
Score = 29.9 bits (64), Expect = 4.8
Identities = 22/65 (33%), Positives = 22/65 (33%), Gaps = 2/65 (3%)
Frame = -2
Query: 664 PXXGGRPXGGXXPRDXGEPEXXXGXGXRGXXXXLXXGXXXXXXGX--PGXPXXXGGPXXR 491
P GR GG R G P G G G G G PG P GGP
Sbjct: 32 PGGPGRGRGGPG-RGPGGPGGPGGRGPGGPGGPGGPGGPGGPGGPGGPGGPGCPGGPGGP 90
Query: 490 XGPTP 476
GP P
Sbjct: 91 GGPKP 95
Score = 29.5 bits (63), Expect = 6.3
Identities = 20/59 (33%), Positives = 20/59 (33%)
Frame = -2
Query: 535 GXPGXPXXXGGPXXRXGPTPXXXXXGRGXGPXGGXGAGGXXKXKPRARXXGXPGVXCXP 359
G PG P G R GP GRG G GG G G G PG P
Sbjct: 30 GGPGGPGRGRGGPGR-GPGGPGGPGGRGPGGPGGPGGPGGPGGPGGPGGPGGPGCPGGP 87
>BT016106-1|AAV36991.1| 840|Drosophila melanogaster LD20133p
protein.
Length = 840
Score = 31.1 bits (67), Expect = 2.1
Identities = 28/93 (30%), Positives = 32/93 (34%), Gaps = 3/93 (3%)
Frame = -2
Query: 535 GXPGXPXXXGGPXXRXGPTPXXXXXGRGXGPXGGXGAGGXXKXKP--RARXXGXPGVXCX 362
G G GP + P G G GP G GAG P + + PGV
Sbjct: 611 GAGGGNNNPNGPNAQQSTPPPQGGAGGGAGPSGPGGAGQQYAGPPQQQPQQQQPPGVVVS 670
Query: 361 PXLS-SNQVRPPTSVPRTPAQVLQPHXPCVPTQ 266
QV+P S P Q QP P P Q
Sbjct: 671 GVAPLPTQVQPTYSTPGNYNQ--QPGAPPPPNQ 701
>AE014298-1168|AAF46366.1| 926|Drosophila melanogaster CG10555-PA
protein.
Length = 926
Score = 31.1 bits (67), Expect = 2.1
Identities = 28/93 (30%), Positives = 32/93 (34%), Gaps = 3/93 (3%)
Frame = -2
Query: 535 GXPGXPXXXGGPXXRXGPTPXXXXXGRGXGPXGGXGAGGXXKXKP--RARXXGXPGVXCX 362
G G GP + P G G GP G GAG P + + PGV
Sbjct: 697 GAGGGNNNPNGPNAQQSTPPPQGGAGGGAGPSGPGGAGQQYAGPPQQQPQQQQPPGVVVS 756
Query: 361 PXLS-SNQVRPPTSVPRTPAQVLQPHXPCVPTQ 266
QV+P S P Q QP P P Q
Sbjct: 757 GVAPLPTQVQPTYSTPGNYNQ--QPGAPPPPNQ 787
>U02042-1|AAA19249.1| 606|Drosophila melanogaster GABA receptor
protein.
Length = 606
Score = 29.9 bits (64), Expect = 4.8
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 493 RXGPTPXXXXXGRGXGPXGGXGAGGXXKXKP 401
R GP G+G GP GG G GG P
Sbjct: 501 RGGPQSHGPGPGQGGGPPGGGGGGGGGGGPP 531
>M69057-3|AAA28558.1| 595|Drosophila melanogaster GABA-alpha
receptor protein.
Length = 595
Score = 29.9 bits (64), Expect = 4.8
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 493 RXGPTPXXXXXGRGXGPXGGXGAGGXXKXKP 401
R GP G+G GP GG G GG P
Sbjct: 490 RGGPQSHGPGPGQGGGPPGGGGGGGGGGGPP 520
>M69057-2|AAA28557.1| 601|Drosophila melanogaster GABA-alpha
receptor protein.
Length = 601
Score = 29.9 bits (64), Expect = 4.8
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 493 RXGPTPXXXXXGRGXGPXGGXGAGGXXKXKP 401
R GP G+G GP GG G GG P
Sbjct: 496 RGGPQSHGPGPGQGGGPPGGGGGGGGGGGPP 526
>M69057-1|AAA28556.1| 606|Drosophila melanogaster GABA-alpha
receptor protein.
Length = 606
Score = 29.9 bits (64), Expect = 4.8
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 493 RXGPTPXXXXXGRGXGPXGGXGAGGXXKXKP 401
R GP G+G GP GG G GG P
Sbjct: 501 RGGPQSHGPGPGQGGGPPGGGGGGGGGGGPP 531
>AY118673-1|AAM50533.1| 1436|Drosophila melanogaster AT03687p
protein.
Length = 1436
Score = 29.9 bits (64), Expect = 4.8
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Frame = +1
Query: 97 LSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHANIRESESTVR-IQADLQIELD 255
L+ +DSL AT + PP +KI NLT+ H+ + + + I A LQ ELD
Sbjct: 90 LNADLDSLFATDELACPPPPPLAKIPTNLTVERPHSRLSDPKKIESDIDARLQAELD 146
>AE014296-1598|AAN11989.1| 585|Drosophila melanogaster CG10537-PB,
isoform B protein.
Length = 585
Score = 29.9 bits (64), Expect = 4.8
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 493 RXGPTPXXXXXGRGXGPXGGXGAGGXXKXKP 401
R GP G+G GP GG G GG P
Sbjct: 480 RGGPQSHGPGPGQGGGPPGGGGGGGGGGGPP 510
>AE014296-1597|AAF50311.1| 606|Drosophila melanogaster CG10537-PA,
isoform A protein.
Length = 606
Score = 29.9 bits (64), Expect = 4.8
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 493 RXGPTPXXXXXGRGXGPXGGXGAGGXXKXKP 401
R GP G+G GP GG G GG P
Sbjct: 501 RGGPQSHGPGPGQGGGPPGGGGGGGGGGGPP 531
>AE014296-1596|AAN11988.1| 606|Drosophila melanogaster CG10537-PC,
isoform C protein.
Length = 606
Score = 29.9 bits (64), Expect = 4.8
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -2
Query: 493 RXGPTPXXXXXGRGXGPXGGXGAGGXXKXKP 401
R GP G+G GP GG G GG P
Sbjct: 501 RGGPQSHGPGPGQGGGPPGGGGGGGGGGGPP 531
>AE014134-551|AAF51149.1| 2409|Drosophila melanogaster CG3524-PA
protein.
Length = 2409
Score = 29.5 bits (63), Expect = 6.3
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 194 LTFVSPSPPCEYRQIFKLNWIDKRLSWNAGXVGLQHLGWCPRNA 325
L + +P+P KL +D+ L W G VGL G+ NA
Sbjct: 376 LHYRTPNPSVPALVEGKLKVVDRNLPWQGGIVGLNSFGFGGANA 419
>M96575-1|AAB59184.1| 1775|Drosophila melanogaster type IV collagen
protein.
Length = 1775
Score = 29.1 bits (62), Expect = 8.3
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = -2
Query: 535 GXPGXPXXXGGPXXRXGPTPXXXXXGRGXGPXGGXGAGGXXKXKPRARXXGXPG 374
G PG P G P R G T G P GG G G K G PG
Sbjct: 364 GLPGNPGQKGEPG-RAGATGEPGLLGPPGPPGGGRGTPGPPGPKGPRGYVGAPG 416
>M23704-1|AAA28404.1| 1775|Drosophila melanogaster alpha-1 type IV
collagen protein.
Length = 1775
Score = 29.1 bits (62), Expect = 8.3
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = -2
Query: 535 GXPGXPXXXGGPXXRXGPTPXXXXXGRGXGPXGGXGAGGXXKXKPRARXXGXPG 374
G PG P G P R G T G P GG G G K G PG
Sbjct: 364 GLPGNPGQKGEPG-RAGATGEPGLLGPPGPPGGGRGTPGPPGPKGPRGYVGAPG 416
>J02727-1|AAA28423.1| 1775|Drosophila melanogaster type IV
pro-collagen protein.
Length = 1775
Score = 29.1 bits (62), Expect = 8.3
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = -2
Query: 535 GXPGXPXXXGGPXXRXGPTPXXXXXGRGXGPXGGXGAGGXXKXKPRARXXGXPG 374
G PG P G P R G T G P GG G G K G PG
Sbjct: 364 GLPGNPGQKGEPG-RAGATGEPGLLGPPGPPGGGRGTPGPPGPKGPRGYVGAPG 416
>AE014134-846|AAN10520.1| 1779|Drosophila melanogaster CG4145-PC,
isoform C protein.
Length = 1779
Score = 29.1 bits (62), Expect = 8.3
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = -2
Query: 535 GXPGXPXXXGGPXXRXGPTPXXXXXGRGXGPXGGXGAGGXXKXKPRARXXGXPG 374
G PG P G P R G T G P GG G G K G PG
Sbjct: 364 GLPGNPGQKGEPG-RAGATGKPGLLGPPGPPGGGRGTPGPPGPKGPRGYVGAPG 416
>AE014134-845|AAN10519.1| 1779|Drosophila melanogaster CG4145-PB,
isoform B protein.
Length = 1779
Score = 29.1 bits (62), Expect = 8.3
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = -2
Query: 535 GXPGXPXXXGGPXXRXGPTPXXXXXGRGXGPXGGXGAGGXXKXKPRARXXGXPG 374
G PG P G P R G T G P GG G G K G PG
Sbjct: 364 GLPGNPGQKGEPG-RAGATGKPGLLGPPGPPGGGRGTPGPPGPKGPRGYVGAPG 416
>AE014134-844|AAF52204.1| 1779|Drosophila melanogaster CG4145-PA,
isoform A protein.
Length = 1779
Score = 29.1 bits (62), Expect = 8.3
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = -2
Query: 535 GXPGXPXXXGGPXXRXGPTPXXXXXGRGXGPXGGXGAGGXXKXKPRARXXGXPG 374
G PG P G P R G T G P GG G G K G PG
Sbjct: 364 GLPGNPGQKGEPG-RAGATGKPGLLGPPGPPGGGRGTPGPPGPKGPRGYVGAPG 416
>AE014134-552|AAF51148.1| 2438|Drosophila melanogaster CG3523-PA
protein.
Length = 2438
Score = 29.1 bits (62), Expect = 8.3
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 242 KLNWIDKRLSWNAGXVGLQHLGWCPRNA 325
+L +D+ L WN G +GL G+ NA
Sbjct: 411 RLKVVDRNLPWNGGIIGLNSFGFGGANA 438
>AE013599-3536|AAF46950.1| 344|Drosophila melanogaster CG9888-PA
protein.
Length = 344
Score = 29.1 bits (62), Expect = 8.3
Identities = 29/93 (31%), Positives = 30/93 (32%)
Frame = -2
Query: 652 GRPXGGXXPRDXGEPEXXXGXGXRGXXXXLXXGXXXXXXGXPGXPXXXGGPXXRXGPTPX 473
G+P G PR G G G RG G G G GG R G
Sbjct: 2 GKP--GFSPRGGGGGGGGGGGGFRGRG-----GGGGGGGGGFGGGRGRGGGGDRGGR--G 52
Query: 472 XXXXGRGXGPXGGXGAGGXXKXKPRARXXGXPG 374
GRG G GG G GG R G G
Sbjct: 53 GFGGGRGGGGRGGGGGGGRGAFGGRGGGGGRGG 85
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,333,327
Number of Sequences: 53049
Number of extensions: 598052
Number of successful extensions: 2931
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2538
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4209111660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -