Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_G01
(835 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPJ698.02c |rps002|rpsa-2, rps0-2, rps0|40S ribosomal protein ... 169 4e-43
SPBC685.06 |rps001|rps0-1, rpsa-1, rps0|40S ribosomal protein S0... 164 2e-41
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 42 1e-04
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 36 0.005
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 36 0.009
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 33 0.038
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 33 0.038
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.47
SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein Sap49|Schizo... 29 1.1
SPAC823.16c |mug179||WD repeat protein Mug179|Schizosaccharomyce... 28 1.9
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 2.5
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 5.7
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 5.7
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 26 5.7
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 7.6
>SPAPJ698.02c |rps002|rpsa-2, rps0-2, rps0|40S ribosomal protein
S0B|Schizosaccharomyces pombe|chr 1|||Manual
Length = 287
Score = 169 bits (411), Expect = 4e-43
Identities = 78/121 (64%), Positives = 95/121 (78%)
Frame = +3
Query: 120 VLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAARAVV 299
VL ++D+ +LAA +H+G++N+ +ME YV+KRR+DG H+INL +TWEKLVLAAR +
Sbjct: 10 VLNATDDDIKNLLAADSHIGSKNLEVRMENYVWKRRSDGIHIINLGKTWEKLVLAARVIA 69
Query: 300 AIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPXAXTNXIQAAXREPRLLIVXD 479
IENPADV VISSRP+G RAVLKFAAHTGAT IAGRFTP TN I REPRL+IV D
Sbjct: 70 TIENPADVCVISSRPYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPRLIIVTD 129
Query: 480 P 482
P
Sbjct: 130 P 130
>SPBC685.06 |rps001|rps0-1, rpsa-1, rps0|40S ribosomal protein S0A
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 292
Score = 164 bits (398), Expect = 2e-41
Identities = 73/125 (58%), Positives = 96/125 (76%)
Frame = +3
Query: 108 GGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVLAA 287
G ++L +ED+ ++LAA H+G++N+ +M+ YV+KRR+DG H++NL +TWEKLVLAA
Sbjct: 5 GRPNILNATDEDIKQLLAANCHIGSKNLEVRMDNYVWKRRSDGVHILNLGKTWEKLVLAA 64
Query: 288 RAVVAIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPXAXTNXIQAAXREPRLL 467
R + IENPADV V+S+R +G RAVLKFAAHTGAT IAGRFTP TN I REPRL+
Sbjct: 65 RVIATIENPADVCVVSTRTYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPRLI 124
Query: 468 IVXDP 482
+V DP
Sbjct: 125 VVTDP 129
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 41.5 bits (93), Expect = 1e-04
Identities = 22/64 (34%), Positives = 24/64 (37%)
Frame = +2
Query: 632 LXXXPPPXXPXVXLPXPXXPXFXXXPPXPXXXPPPPXXXXXXXPPGPPXXXXXXPXPXXX 811
L PPP P V +P P PP P PPP PP PP P P
Sbjct: 728 LLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPP-------PPPPPGVAGAGPPPPPP 780
Query: 812 XPPS 823
PP+
Sbjct: 781 PPPA 784
Score = 29.5 bits (63), Expect = 0.61
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = +1
Query: 646 PPPXPXGXXPXSPXXPXXPXXPXPPXXXPPPXXXXXPXSPXASPXXXXXP 795
PPP P P P P PP PPP S +P P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 596 PXPPPPXGXXXXLXXXPPPXXPXV 667
P PPPP G PPP P V
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPPAV 785
Score = 25.8 bits (54), Expect = 7.6
Identities = 11/35 (31%), Positives = 11/35 (31%)
Frame = +2
Query: 728 PPPPXXXXXXXPPGPPXXXXXXPXPXXXXPPSXXP 832
PPPP P P P P PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPP 766
Score = 25.8 bits (54), Expect = 7.6
Identities = 13/44 (29%), Positives = 16/44 (36%), Gaps = 3/44 (6%)
Frame = +1
Query: 634 VXXSPPPXPXGXXPXSPXXPXXPXXPXPP---XXXPPPXXXXXP 756
+ +P P P P +P P P PP PPP P
Sbjct: 740 IVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 36.3 bits (80), Expect = 0.005
Identities = 21/62 (33%), Positives = 21/62 (33%)
Frame = -3
Query: 833 GXGXRGGXXXGXXGXXXXXGEAXGXXGXXXXXGGGXXXGGXGXXGXXGXXGXXGXXPXGX 654
G G GG G G G G GGG G G G G G G P G
Sbjct: 209 GFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGH 268
Query: 653 GG 648
GG
Sbjct: 269 GG 270
Score = 34.3 bits (75), Expect = 0.022
Identities = 22/63 (34%), Positives = 22/63 (34%)
Frame = -3
Query: 833 GXGXRGGXXXGXXGXXXXXGEAXGXXGXXXXXGGGXXXGGXGXXGXXGXXGXXGXXPXGX 654
G G GG G G G G G GG G G G G G G P G
Sbjct: 203 GPGGFGGFG-GFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGF 261
Query: 653 GGG 645
GGG
Sbjct: 262 GGG 264
Score = 29.1 bits (62), Expect = 0.81
Identities = 24/80 (30%), Positives = 24/80 (30%), Gaps = 1/80 (1%)
Frame = -2
Query: 831 GXXEGGXXXXGXGXXXXXXGGPGGXXXXXXXGGGGXX-XGXGGXXXXXGXXGXGXXTXGX 655
G GG G G G PGG GG G G GG G G G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPG-PGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGG 242
Query: 654 XGGGXXXSXHXXPXGGGGXG 595
GG G GG G
Sbjct: 243 GPGGFGGGLGGFGGGPGGFG 262
Score = 28.3 bits (60), Expect = 1.4
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -2
Query: 774 GGPGGXXXXXXXGGGGXXXGXGGXXXXXGXXGXGXXTXGXXGGG 643
GGPGG G GG G GG G G G G GG
Sbjct: 228 GGPGGF----EGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGG 267
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.5 bits (78), Expect = 0.009
Identities = 25/87 (28%), Positives = 26/87 (29%), Gaps = 4/87 (4%)
Frame = +2
Query: 584 SXATPXPPPPXGXXXX---LXXXPPPXXPXVXLPXPXXPXFXXXP-PXPXXXPPPPXXXX 751
S A P P P G PP P +P P P P P PP P
Sbjct: 1146 SVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSV 1205
Query: 752 XXXPPGPPXXXXXXPXPXXXXPPSXXP 832
P PP P P PP P
Sbjct: 1206 GVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 31.5 bits (68), Expect = 0.15
Identities = 19/64 (29%), Positives = 19/64 (29%), Gaps = 1/64 (1%)
Frame = +2
Query: 644 PPPXXPXVXLPXPXXPXFXXXP-PXPXXXPPPPXXXXXXXPPGPPXXXXXXPXPXXXXPP 820
PP P V P P P P P PP P P P P P PP
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPP 1151
Query: 821 SXXP 832
P
Sbjct: 1152 VPAP 1155
Score = 30.7 bits (66), Expect = 0.27
Identities = 17/63 (26%), Positives = 17/63 (26%)
Frame = +1
Query: 646 PPPXPXGXXPXSPXXPXXPXXPXPPXXXPPPXXXXXPXSPXASPXXXXXPXXPXXXPPLX 825
P P P P P P P P PP P P P P P
Sbjct: 1141 PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPV 1200
Query: 826 PXP 834
P P
Sbjct: 1201 PKP 1203
Score = 29.9 bits (64), Expect = 0.47
Identities = 20/76 (26%), Positives = 21/76 (27%), Gaps = 1/76 (1%)
Frame = +2
Query: 593 TPXPPPPXGXXXXLXXXPPPXXPXVXLPXPXXPXFXXXPPXPXXXPPPPXXXXXXXP-PG 769
T PP P PP P +P P P P PP P P P
Sbjct: 1047 TSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPK 1106
Query: 770 PPXXXXXXPXPXXXXP 817
P P P P
Sbjct: 1107 PSVAVPPVPAPSGAPP 1122
Score = 29.5 bits (63), Expect = 0.61
Identities = 24/101 (23%), Positives = 27/101 (26%), Gaps = 1/101 (0%)
Frame = +1
Query: 529 PVIAXXXXXSPXXXXDXAIPCHXXXXPAXXXXVXAVXXSPPPXPXGXXPXSPXXPXXPXX 708
PV P A+P A +V P P P G P P
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPV 1152
Query: 709 PXPPXXXP-PPXXXXXPXSPXASPXXXXXPXXPXXXPPLXP 828
P P P P P P S P PP+ P
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
Score = 29.1 bits (62), Expect = 0.81
Identities = 24/85 (28%), Positives = 25/85 (29%), Gaps = 2/85 (2%)
Frame = +2
Query: 584 SXATPXPPPPXGXXXXLXXXPPPXX-PXVXLPXPXXPXFXXXPPXPXXXPPPPXXXXXXX 760
S A PPP + P P P V P P P P PP
Sbjct: 1057 SGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPV-----PKPSVAAPPVPKPSVAV 1111
Query: 761 PPGP-PXXXXXXPXPXXXXPPSXXP 832
PP P P P P PP P
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVP 1136
Score = 29.1 bits (62), Expect = 0.81
Identities = 17/63 (26%), Positives = 17/63 (26%)
Frame = +2
Query: 644 PPPXXPXVXLPXPXXPXFXXXPPXPXXXPPPPXXXXXXXPPGPPXXXXXXPXPXXXXPPS 823
PP P P P P P PP P P P P P PP
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV 1171
Query: 824 XXP 832
P
Sbjct: 1172 PAP 1174
Score = 27.9 bits (59), Expect = 1.9
Identities = 22/103 (21%), Positives = 25/103 (24%)
Frame = +1
Query: 526 IPVIAXXXXXSPXXXXDXAIPCHXXXXPAXXXXVXAVXXSPPPXPXGXXPXSPXXPXXPX 705
+P + P A P A +V P P P G P P
Sbjct: 1111 VPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPP 1170
Query: 706 XPXPPXXXPPPXXXXXPXSPXASPXXXXXPXXPXXXPPLXPXP 834
P P PP P P P P P P
Sbjct: 1171 VPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 27.1 bits (57), Expect = 3.3
Identities = 21/87 (24%), Positives = 22/87 (25%), Gaps = 6/87 (6%)
Frame = +2
Query: 590 ATPXPPPPXGXXXXLXXXPPPXX------PXVXLPXPXXPXFXXXPPXPXXXPPPPXXXX 751
A P P P + PP P P P P P PP P
Sbjct: 1031 APPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSG 1090
Query: 752 XXXPPGPPXXXXXXPXPXXXXPPSXXP 832
P P P P PP P
Sbjct: 1091 IPPVPKPSVAAPPVPKPSVAVPPVPAP 1117
Score = 26.6 bits (56), Expect = 4.3
Identities = 19/68 (27%), Positives = 20/68 (29%)
Frame = +1
Query: 631 AVXXSPPPXPXGXXPXSPXXPXXPXXPXPPXXXPPPXXXXXPXSPXASPXXXXXPXXPXX 810
+V P P P P P P P PP PP P P P P
Sbjct: 1165 SVAAPPVPAPSSGIPPVP-KPAAGVPPVPPPSEAPPVPKPSVGVPPV-PPPSTAPPVPTP 1222
Query: 811 XPPLXPXP 834
L P P
Sbjct: 1223 SAGLPPVP 1230
Score = 26.6 bits (56), Expect = 4.3
Identities = 23/85 (27%), Positives = 23/85 (27%), Gaps = 4/85 (4%)
Frame = +2
Query: 590 ATPXPPPPXGXXXXLXXXP--PPXXPXVXLPXPXXPXFXXXP-PXPXXXPPPPXXXXXXX 760
A P P P G PP P P P P P P PP P
Sbjct: 1168 APPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLP 1227
Query: 761 P-PGPPXXXXXXPXPXXXXPPSXXP 832
P P P P P P P
Sbjct: 1228 PVPVPTAKAPPVPAPSSEAPSVSTP 1252
Score = 26.2 bits (55), Expect = 5.7
Identities = 21/72 (29%), Positives = 22/72 (30%), Gaps = 2/72 (2%)
Frame = +1
Query: 625 VXAVXXSPP-PXPXGXXPXSPXXPXXPXXPXP-PXXXPPPXXXXXPXSPXASPXXXXXPX 798
V A +PP P P P P P P P P PP P P P
Sbjct: 1152 VPAPSGAPPVPKPSVAAPPVPA-PSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPV 1210
Query: 799 XPXXXPPLXPXP 834
P P P P
Sbjct: 1211 PPPSTAPPVPTP 1222
Score = 25.8 bits (54), Expect = 7.6
Identities = 16/61 (26%), Positives = 17/61 (27%)
Frame = +1
Query: 652 PXPXGXXPXSPXXPXXPXXPXPPXXXPPPXXXXXPXSPXASPXXXXXPXXPXXXPPLXPX 831
P P G P P P P P PP P +P P P P
Sbjct: 1077 PAPSGAPPV-PAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPV 1135
Query: 832 P 834
P
Sbjct: 1136 P 1136
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 33.5 bits (73), Expect = 0.038
Identities = 21/79 (26%), Positives = 22/79 (27%), Gaps = 2/79 (2%)
Frame = +2
Query: 590 ATPXPPPPXGXXXXLXXXPPPXXPXVXLPXPXXPXFXXXPPXPXXXPPP--PXXXXXXXP 763
+ P PP P PP P P PP P PPP P P
Sbjct: 126 SAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Query: 764 PGPPXXXXXXPXPXXXXPP 820
P P P PP
Sbjct: 186 SAPSLPSAVPPMPPKVPPP 204
Score = 27.9 bits (59), Expect = 1.9
Identities = 14/49 (28%), Positives = 15/49 (30%)
Frame = +1
Query: 673 PXSPXXPXXPXXPXPPXXXPPPXXXXXPXSPXASPXXXXXPXXPXXXPP 819
P +P P PP PP P A P P P PP
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPP 173
Score = 27.9 bits (59), Expect = 1.9
Identities = 21/80 (26%), Positives = 25/80 (31%), Gaps = 2/80 (2%)
Frame = +3
Query: 591 PXXXXPRXXVXGXXCXPLPPPXPXXXXSXXPXXPXXSXXPPAPXXXPPPXX-SXXXXXPX 767
P P+ + P P P + P P S PP P PPP + P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIP--SKAPPIPSSLPPPAQPAAPVKSPP 185
Query: 768 GLPXXXXXXXX-PXXXPPPP 824
P P PPPP
Sbjct: 186 SAPSLPSAVPPMPPKVPPPP 205
Score = 27.5 bits (58), Expect = 2.5
Identities = 19/67 (28%), Positives = 21/67 (31%), Gaps = 5/67 (7%)
Frame = +1
Query: 643 SPPPXPXGXXPXS-----PXXPXXPXXPXPPXXXPPPXXXXXPXSPXASPXXXXXPXXPX 807
+PP P P S P P P P PP P P + P P P
Sbjct: 123 APPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLP-PPAQPAAPV 181
Query: 808 XXPPLXP 828
PP P
Sbjct: 182 KSPPSAP 188
Score = 26.2 bits (55), Expect = 5.7
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = +3
Query: 642 LPPPX-PXXXXSXXPXXPXX-SXXPPAPXXXPPPXXS 746
LPPP P P P S PP P PPP S
Sbjct: 171 LPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLS 207
Score = 25.8 bits (54), Expect = 7.6
Identities = 15/62 (24%), Positives = 15/62 (24%)
Frame = +2
Query: 647 PPXXPXVXLPXPXXPXFXXXPPXPXXXPPPPXXXXXXXPPGPPXXXXXXPXPXXXXPPSX 826
PP P P PP P PP P PP P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKS 183
Query: 827 XP 832
P
Sbjct: 184 PP 185
Score = 25.8 bits (54), Expect = 7.6
Identities = 17/65 (26%), Positives = 18/65 (27%)
Frame = +3
Query: 639 PLPPPXPXXXXSXXPXXPXXSXXPPAPXXXPPPXXSXXXXXPXGLPXXXXXXXXPXXXPP 818
P PP P S PP+P PP S P LP P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSP-ASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPS 186
Query: 819 PPXXP 833
P P
Sbjct: 187 APSLP 191
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 33.5 bits (73), Expect = 0.038
Identities = 21/62 (33%), Positives = 22/62 (35%)
Frame = -3
Query: 827 GXRGGXXXGXXGXXXXXGEAXGXXGXXXXXGGGXXXGGXGXXGXXGXXGXXGXXPXGXGG 648
G RGG G G G G G G G GG G G G G G G GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRG--GARGGRGGSSGGRGG 66
Query: 647 GE 642
+
Sbjct: 67 AK 68
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.9 bits (64), Expect = 0.47
Identities = 20/69 (28%), Positives = 22/69 (31%)
Frame = +2
Query: 596 PXPPPPXGXXXXLXXXPPPXXPXVXLPXPXXPXFXXXPPXPXXXPPPPXXXXXXXPPGPP 775
P P PP PP P + + P P PP PP P PP PP
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPL---PPSAPIAPPLP-AGMPAAPPLPP 471
Query: 776 XXXXXXPXP 802
P P
Sbjct: 472 AAPAPPPAP 480
Score = 29.1 bits (62), Expect = 0.81
Identities = 23/76 (30%), Positives = 24/76 (31%)
Frame = +1
Query: 607 PAXXXXVXAVXXSPPPXPXGXXPXSPXXPXXPXXPXPPXXXPPPXXXXXPXSPXASPXXX 786
PA A S PP P P P P P P P PP P +P P
Sbjct: 401 PALPPLGNASRTSTPPVP--TPPSLP--PSAP--PSLPPSAPPSLPMGAPAAPPLPPSAP 454
Query: 787 XXPXXPXXXPPLXPXP 834
P P P P P
Sbjct: 455 IAPPLPAGMPAAPPLP 470
Score = 28.7 bits (61), Expect = 1.1
Identities = 17/59 (28%), Positives = 19/59 (32%), Gaps = 1/59 (1%)
Frame = +1
Query: 643 SPPPXPXGXXPXSP-XXPXXPXXPXPPXXXPPPXXXXXPXSPXASPXXXXXPXXPXXXP 816
+PP P P P P P P P PP P +P P P P P
Sbjct: 427 APPSLPPSAPPSLPMGAPAAPPLP-PSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 28.3 bits (60), Expect = 1.4
Identities = 22/86 (25%), Positives = 24/86 (27%)
Frame = +3
Query: 576 PXYPXPXXXXPRXXVXGXXCXPLPPPXPXXXXSXXPXXPXXSXXPPAPXXXPPPXXSXXX 755
P P P + P PPP P P S P PPP +
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAG 349
Query: 756 XXPXGLPXXXXXXXXPXXXPPPPXXP 833
P LP P PPP P
Sbjct: 350 SIP--LPPQGRSAPPP---PPPRSAP 370
Score = 27.9 bits (59), Expect = 1.9
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +3
Query: 648 PPXPXXXXSXXPXXPXXSXXPPAPXXXPPPXXSXXXXXPXGLP 776
PP P S P S PAP PPP P P
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPP 272
Score = 27.9 bits (59), Expect = 1.9
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +3
Query: 639 PLPPPXPXXXXSXXPXXPXXSXXPPAPXXXP 731
P+ PP P + P P PPAP P
Sbjct: 454 PIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 27.5 bits (58), Expect = 2.5
Identities = 19/70 (27%), Positives = 19/70 (27%), Gaps = 3/70 (4%)
Frame = +2
Query: 596 PXPP--PPXGXXXXLXXXPPPXXPXVXLPXPXXPXFXXXPPXPXXXP-PPPXXXXXXXPP 766
P PP PP PP P P PP P P PP PP
Sbjct: 418 PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Query: 767 GPPXXXXXXP 796
P P
Sbjct: 478 PAPAPAPAAP 487
Score = 27.1 bits (57), Expect = 3.3
Identities = 20/73 (27%), Positives = 21/73 (28%)
Frame = +3
Query: 606 PRXXVXGXXCXPLPPPXPXXXXSXXPXXPXXSXXPPAPXXXPPPXXSXXXXXPXGLPXXX 785
P + G LPP S P S P AP PP S P G P
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPP---SAPPSLPMGAPAAP 447
Query: 786 XXXXXPXXXPPPP 824
PP P
Sbjct: 448 PLPPSAPIAPPLP 460
Score = 25.8 bits (54), Expect = 7.6
Identities = 19/62 (30%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Frame = +1
Query: 646 PPPXPXGXXPXS-PXXPXXPXXPXPPXXXPPPXXXXXPXSPXASPXXXXXPXXPXXXPPL 822
PPP P S P P P PP P P P +S P P PP
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQP-PPLSSSRAVSNPPAP---PPA 394
Query: 823 XP 828
P
Sbjct: 395 IP 396
Score = 25.8 bits (54), Expect = 7.6
Identities = 17/61 (27%), Positives = 18/61 (29%), Gaps = 1/61 (1%)
Frame = +1
Query: 643 SPPPXPXGXXPXSPXXPXXPXXPXPPXXXPPPXXXXXPXS-PXASPXXXXXPXXPXXXPP 819
S P P P P P P PP P S P +P P PP
Sbjct: 399 SAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPP 458
Query: 820 L 822
L
Sbjct: 459 L 459
>SPAC31G5.01 |sap49|SPAPB1A11.05|RNA-binding protein
Sap49|Schizosaccharomyces pombe|chr 1|||Manual
Length = 335
Score = 28.7 bits (61), Expect = 1.1
Identities = 23/87 (26%), Positives = 24/87 (27%), Gaps = 1/87 (1%)
Frame = +2
Query: 545 ATXTPHXXXXTXLSXA-TPXPPPPXGXXXXLXXXPPPXXPXVXLPXPXXPXFXXXPPXPX 721
AT P T + A T PP P PP LP F P P
Sbjct: 217 ATPAPTSAANTPATIAATSIPPVPNVPLVGATTAVPPLSIPNVLPFTAAQHFPGMPAMPM 276
Query: 722 XXPPPPXXXXXXXPPGPPXXXXXXPXP 802
P PP PP P P
Sbjct: 277 MNVPMGPGGAPLVPPPPPGMVMASPSP 303
>SPAC823.16c |mug179||WD repeat protein Mug179|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 335
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/46 (26%), Positives = 27/46 (58%)
Frame = +3
Query: 243 VINLRRTWEKLVLAARAVVAIENPADVFVISSRPFGQRAVLKFAAH 380
V+++R TW +LV+ + + + N ++ +I++ + V+ FA H
Sbjct: 89 VLSVRFTWNRLVVLIKGSIYVYNLKNMELINTLNTSKGNVIAFAVH 134
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 27.5 bits (58), Expect = 2.5
Identities = 15/50 (30%), Positives = 17/50 (34%)
Frame = +2
Query: 590 ATPXPPPPXGXXXXLXXXPPPXXPXVXLPXPXXPXFXXXPPXPXXXPPPP 739
+TP P + PP P P P P P P PPPP
Sbjct: 1688 STPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPM---PAGPPSAPPPP 1734
Score = 27.5 bits (58), Expect = 2.5
Identities = 14/51 (27%), Positives = 14/51 (27%)
Frame = +2
Query: 680 PXXPXFXXXPPXPXXXPPPPXXXXXXXPPGPPXXXXXXPXPXXXXPPSXXP 832
P P P PPPP P PP P P S P
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 26.6 bits (56), Expect = 4.3
Identities = 19/59 (32%), Positives = 21/59 (35%)
Frame = +2
Query: 557 PHXXXXTXLSXATPXPPPPXGXXXXLXXXPPPXXPXVXLPXPXXPXFXXXPPXPXXXPP 733
P +S TP PPPP + PPP P P P P PP P P
Sbjct: 1694 PQSAAPPQMSAPTP-PPPP------MSVPPPPSAP----PMPAGPPSAPPPPLPASSAP 1741
Score = 25.8 bits (54), Expect = 7.6
Identities = 14/51 (27%), Positives = 14/51 (27%)
Frame = +1
Query: 586 PCHXXXXPAXXXXVXAVXXSPPPXPXGXXPXSPXXPXXPXXPXPPXXXPPP 738
P H P A P P P P P P P PPP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.2 bits (55), Expect = 5.7
Identities = 16/62 (25%), Positives = 17/62 (27%)
Frame = +1
Query: 649 PPXPXGXXPXSPXXPXXPXXPXPPXXXPPPXXXXXPXSPXASPXXXXXPXXPXXXPPLXP 828
PP P P P P P PPP P P P PP+
Sbjct: 208 PPPPMHHKPGE-HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHH 266
Query: 829 XP 834
P
Sbjct: 267 EP 268
Score = 26.2 bits (55), Expect = 5.7
Identities = 16/62 (25%), Positives = 17/62 (27%)
Frame = +1
Query: 649 PPXPXGXXPXSPXXPXXPXXPXPPXXXPPPXXXXXPXSPXASPXXXXXPXXPXXXPPLXP 828
PP P P P P P PPP P P P PP+
Sbjct: 221 PPPPMHHEPGE-HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHH 279
Query: 829 XP 834
P
Sbjct: 280 EP 281
Score = 26.2 bits (55), Expect = 5.7
Identities = 16/62 (25%), Positives = 17/62 (27%)
Frame = +1
Query: 649 PPXPXGXXPXSPXXPXXPXXPXPPXXXPPPXXXXXPXSPXASPXXXXXPXXPXXXPPLXP 828
PP P P P P P PPP P P P PP+
Sbjct: 234 PPPPMHHEPGE-HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHH 292
Query: 829 XP 834
P
Sbjct: 293 EP 294
Score = 26.2 bits (55), Expect = 5.7
Identities = 16/62 (25%), Positives = 17/62 (27%)
Frame = +1
Query: 649 PPXPXGXXPXSPXXPXXPXXPXPPXXXPPPXXXXXPXSPXASPXXXXXPXXPXXXPPLXP 828
PP P P P P P PPP P P P PP+
Sbjct: 247 PPPPMHHEPGE-HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHH 305
Query: 829 XP 834
P
Sbjct: 306 EP 307
Score = 26.2 bits (55), Expect = 5.7
Identities = 16/62 (25%), Positives = 17/62 (27%)
Frame = +1
Query: 649 PPXPXGXXPXSPXXPXXPXXPXPPXXXPPPXXXXXPXSPXASPXXXXXPXXPXXXPPLXP 828
PP P P P P P PPP P P P PP+
Sbjct: 260 PPPPMHHEPGE-HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHH 318
Query: 829 XP 834
P
Sbjct: 319 EP 320
Score = 26.2 bits (55), Expect = 5.7
Identities = 16/62 (25%), Positives = 17/62 (27%)
Frame = +1
Query: 649 PPXPXGXXPXSPXXPXXPXXPXPPXXXPPPXXXXXPXSPXASPXXXXXPXXPXXXPPLXP 828
PP P P P P P PPP P P P PP+
Sbjct: 273 PPPPMHHEPGE-HMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHH 331
Query: 829 XP 834
P
Sbjct: 332 EP 333
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 26.2 bits (55), Expect = 5.7
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 707 PPXPXXXPPPPXXXXXXXPPGPP 775
P P PPPP PP PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPP 28
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.2 bits (55), Expect = 5.7
Identities = 16/55 (29%), Positives = 19/55 (34%)
Frame = +2
Query: 575 TXLSXATPXPPPPXGXXXXLXXXPPPXXPXVXLPXPXXPXFXXXPPXPXXXPPPP 739
T ++ TP PPPP L P V + P P PPPP
Sbjct: 900 TIITHPTPPPPPPLPVKTSLNTFSHP--DSVNIVANDTSVAGVMPAFPPPPPPPP 952
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 25.8 bits (54), Expect = 7.6
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = -1
Query: 775 GRPXGXXXXXXXXGGGXXXGAGGXXXKXGXXGXXEXXXXGXGGGXG 638
GRP GGG G GG + G G G GGG G
Sbjct: 433 GRPCRLDFSTPRTGGGSRGGRGGFGGRGGFGG-----RGGFGGGRG 473
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,747,551
Number of Sequences: 5004
Number of extensions: 55761
Number of successful extensions: 330
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 410448950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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