Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_F21
(853 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated io... 45 6e-05
Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical pr... 38 0.012
Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical pr... 38 0.012
AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical ... 38 0.012
AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical ... 38 0.012
AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical ... 38 0.012
AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical ... 38 0.012
AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical ... 38 0.012
AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical... 36 0.028
Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical pr... 36 0.048
U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine re... 36 0.048
X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic... 35 0.084
X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic... 35 0.084
U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated p... 35 0.084
U64843-16|AAX55689.1| 442|Caenorhabditis elegans Modulation of ... 35 0.084
U64843-15|AAF98227.2| 489|Caenorhabditis elegans Modulation of ... 35 0.084
U64843-14|AAM45353.1| 475|Caenorhabditis elegans Modulation of ... 35 0.084
AF303088-1|AAG36975.1| 489|Caenorhabditis elegans serotonin-gat... 35 0.084
Z70270-2|CAA94228.1| 445|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical pr... 34 0.11
U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine r... 34 0.11
U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine r... 34 0.11
AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine... 34 0.11
AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ... 34 0.11
AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical ... 34 0.15
Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical pr... 33 0.20
AL132862-1|CAB60529.2| 434|Caenorhabditis elegans Hypothetical ... 33 0.20
AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine... 33 0.20
X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic acety... 33 0.26
U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine r... 33 0.26
AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated... 33 0.26
AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical ... 33 0.26
Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical pr... 33 0.34
AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine... 33 0.34
Z93397-1|CAB07719.3| 550|Caenorhabditis elegans Hypothetical pr... 32 0.45
Z69302-6|CAL36504.1| 472|Caenorhabditis elegans Hypothetical pr... 32 0.45
L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte upt... 32 0.45
AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein. 32 0.45
AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical ... 31 0.79
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 31 0.79
AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated... 31 0.79
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 31 0.79
Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical pr... 30 1.8
U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine r... 30 1.8
U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine r... 30 1.8
AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine... 30 1.8
AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine... 30 1.8
AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine... 30 1.8
AC006618-5|ABB88234.1| 513|Caenorhabditis elegans Gaba/glycine ... 30 1.8
AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine ... 30 1.8
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 2.4
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 29 3.2
X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit ... 29 3.2
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 29 3.2
Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical pr... 29 4.2
AF022985-15|AAB69969.2| 435|Caenorhabditis elegans Hypothetical... 29 4.2
Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 29 5.5
U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine r... 29 5.5
U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical p... 29 5.5
AF040661-8|AAG24222.1| 327|Caenorhabditis elegans Hypothetical ... 29 5.5
AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical ... 29 5.5
Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical pr... 28 7.3
U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical pr... 28 7.3
AC006816-3|AAK85510.3| 508|Caenorhabditis elegans Hypothetical ... 28 7.3
Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical pr... 28 9.7
X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha nicot... 28 9.7
X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic acety... 28 9.7
AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical ... 28 9.7
>U42839-9|AAC69013.3| 355|Caenorhabditis elegans Ligand-gated ion
channel protein 3 protein.
Length = 355
Score = 45.2 bits (102), Expect = 6e-05
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Frame = +3
Query: 141 IKCRRLILFCYXFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHL 320
++C L +F + +T +A +E +S S + LL +++ SPPD ++ ++ + L
Sbjct: 41 MQCSFLTIFIFITTVTVGVAEFSEQYQGSS-SRLTRHLLEKHNKCSPPDGRVDISHNIEL 99
Query: 321 RHA-NIRESESTVRILADLQMNWIDKRLSWNAGGM-GLQH 434
H I E +++L + W D LSW G++H
Sbjct: 100 VHIIGINELNQNMQVLVYIVQQWTDASLSWKVEEFRGIKH 139
>Z81512-8|CAH19099.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 37.5 bits (83), Expect = 0.012
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 240 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 416
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 417 GMG 425
G
Sbjct: 130 LFG 132
>Z81512-7|CAD54133.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 37.5 bits (83), Expect = 0.012
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 240 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 416
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 417 GMG 425
G
Sbjct: 130 LFG 132
>AL033515-2|CAH19093.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 37.5 bits (83), Expect = 0.012
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 240 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 416
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 417 GMG 425
G
Sbjct: 130 LFG 132
>AL033515-1|CAD54179.1| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 37.5 bits (83), Expect = 0.012
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 240 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 416
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 417 GMG 425
G
Sbjct: 130 LFG 132
>AL033511-2|CAH19091.1| 509|Caenorhabditis elegans Hypothetical
protein Y44A6E.1b protein.
Length = 509
Score = 37.5 bits (83), Expect = 0.012
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 240 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 416
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 417 GMG 425
G
Sbjct: 130 LFG 132
>AL033511-1|CAA22072.2| 504|Caenorhabditis elegans Hypothetical
protein Y44A6E.1a protein.
Length = 504
Score = 37.5 bits (83), Expect = 0.012
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +3
Query: 240 MIDSLLATYDRESPPDSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAG 416
+ + LL+ ++ +PPD + V L L H I E + T+ +L + +W+D L+W+
Sbjct: 70 LTEYLLSRHNLNAPPDGLLYVEYELELVHILGIDELKQTMTVLIYVDEHWVDPSLTWDPA 129
Query: 417 GMG 425
G
Sbjct: 130 LFG 132
>AF038614-9|AAB92062.2| 445|Caenorhabditis elegans Hypothetical
protein F15E6.2 protein.
Length = 445
Score = 37.5 bits (83), Expect = 0.012
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +1
Query: 418 EWGCSTWLVSSERLWRPDVVLLNAAATT-AGDYALRARVSN-NGSVSXIKRLDIXTPISM 591
+WG S ++W P++V +N +T+ G + +N G + TP
Sbjct: 126 QWGLSWLNFYWIQIWTPNIVQINGGSTSNPGQVTSKVLAANYTGQIYLWSDFSFTTPFRF 185
Query: 592 QLDNWPNDMHTCTFXF 639
Q +++PNDM + F
Sbjct: 186 QYEDYPNDMQRVCYKF 201
Score = 31.5 bits (68), Expect = 0.79
Identities = 16/79 (20%), Positives = 32/79 (40%)
Frame = +3
Query: 201 SAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQM 380
S C+ + + TY + +K+V ++ + + I E V++ +
Sbjct: 54 SCHSCQGGDRAWKLRTHIQTTYQNATDNKTKVVRVESVRINNVEIDERRQNVKVFGRFVL 113
Query: 381 NWIDKRLSWNAGGMGLQHL 437
+W D +SW+ GL L
Sbjct: 114 SWNDTMVSWDKEQWGLSWL 132
>AL110479-15|CAB54361.2| 400|Caenorhabditis elegans Hypothetical
protein Y105C5B.16 protein.
Length = 400
Score = 36.3 bits (80), Expect = 0.028
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 264 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 413
YD E+P + L +L+ ++E + + ++ ++ W D RLSWNA
Sbjct: 64 YDNEAPKRYNYTIFL-YYLKLVEVQEPQEKISVVMEIMEYWYDARLSWNA 112
>Z67737-1|CAA91536.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.1 protein.
Length = 399
Score = 35.5 bits (78), Expect = 0.048
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Frame = +3
Query: 243 IDSLLATYDRESP----PDSKIVVNLTL---HLRHANIRESESTVRILADLQMNWIDKRL 401
+ + A +D P PD+ N TL +L+ + E E V ++ +L W D RL
Sbjct: 50 VSPVYAWFDTSKPLGYDPDAPQRYNYTLFLYNLKLIQVNEPEEQVSVVLELMEYWYDPRL 109
Query: 402 SWNA 413
SWNA
Sbjct: 110 SWNA 113
>U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 3 protein.
Length = 438
Score = 35.5 bits (78), Expect = 0.048
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +1
Query: 448 SERLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDM 618
SERLW P+V +N+ +T + + NG+V R+ + P S +L +P D
Sbjct: 112 SERLWTPNVCFVNSKSTQVHKSPASNILLIIYPNGTVWLNYRVQVSAPCSFELSRFPIDA 171
Query: 619 HTCTFXF 639
C F
Sbjct: 172 QECHLVF 178
>X98600-1|CAA67197.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 34.7 bits (76), Expect = 0.084
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 8/97 (8%)
Frame = +3
Query: 171 YXFLLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NI 335
+ LL I+ E + D L+ Y+R + P+ + + L L L ++
Sbjct: 7 FLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDV 66
Query: 336 RESESTVRILADLQMNWIDKRLSW---NAGGMGLQHL 437
E + + L+ WID++LSW N GG+ + ++
Sbjct: 67 HEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYV 103
>X98599-1|CAA67196.1| 511|Caenorhabditis elegans alpha nicotinic
acetylcholine receptorsubunit protein.
Length = 511
Score = 34.7 bits (76), Expect = 0.084
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 8/97 (8%)
Frame = +3
Query: 171 YXFLLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NI 335
+ LL I+ E + D L+ Y+R + P+ + + L L L ++
Sbjct: 7 FLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDV 66
Query: 336 RESESTVRILADLQMNWIDKRLSW---NAGGMGLQHL 437
E + + L+ WID++LSW N GG+ + ++
Sbjct: 67 HEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYV 103
>U88175-2|AAB42282.2| 511|Caenorhabditis elegans Uncoordinated
protein 38 protein.
Length = 511
Score = 34.7 bits (76), Expect = 0.084
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 8/97 (8%)
Frame = +3
Query: 171 YXFLLTCAIASAAECENATSLSLMIDSLLATYDRE----SPPDSKIVVNLTLHLRHA-NI 335
+ LL I+ E + D L+ Y+R + P+ + + L L L ++
Sbjct: 7 FLLLLLFCISFIKLTEGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDV 66
Query: 336 RESESTVRILADLQMNWIDKRLSW---NAGGMGLQHL 437
E + + L+ WID++LSW N GG+ + ++
Sbjct: 67 HEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYV 103
>U64843-16|AAX55689.1| 442|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform c protein.
Length = 442
Score = 34.7 bits (76), Expect = 0.084
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +1
Query: 454 RLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDMHT 624
++W P+ ++N+ TT + + + NG+V RL + +P ++ L +P D T
Sbjct: 113 KIWSPNTCMINSKRTTVHASPSENVMVILYENGTVWINHRLSVKSPCNLDLRQFPFDTQT 172
Query: 625 CTFXF 639
C F
Sbjct: 173 CILIF 177
>U64843-15|AAF98227.2| 489|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform a protein.
Length = 489
Score = 34.7 bits (76), Expect = 0.084
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +1
Query: 454 RLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDMHT 624
++W P+ ++N+ TT + + + NG+V RL + +P ++ L +P D T
Sbjct: 113 KIWSPNTCMINSKRTTVHASPSENVMVILYENGTVWINHRLSVKSPCNLDLRQFPFDTQT 172
Query: 625 CTFXF 639
C F
Sbjct: 173 CILIF 177
>U64843-14|AAM45353.1| 475|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform b protein.
Length = 475
Score = 34.7 bits (76), Expect = 0.084
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +1
Query: 454 RLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDMHT 624
++W P+ ++N+ TT + + + NG+V RL + +P ++ L +P D T
Sbjct: 113 KIWSPNTCMINSKRTTVHASPSENVMVILYENGTVWINHRLSVKSPCNLDLRQFPFDTQT 172
Query: 625 CTFXF 639
C F
Sbjct: 173 CILIF 177
>AF303088-1|AAG36975.1| 489|Caenorhabditis elegans serotonin-gated
chloride channel protein.
Length = 489
Score = 34.7 bits (76), Expect = 0.084
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +1
Query: 454 RLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDMHT 624
++W P+ ++N+ TT + + + NG+V RL + +P ++ L +P D T
Sbjct: 113 KIWSPNTCMINSKRTTVHASPSENVMVILYENGTVWINHRLSVKSPCNLDLRQFPFDTQT 172
Query: 625 CTFXF 639
C F
Sbjct: 173 CILIF 177
>Z70270-2|CAA94228.1| 445|Caenorhabditis elegans Hypothetical
protein C53D6.3 protein.
Length = 445
Score = 34.3 bits (75), Expect = 0.11
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +1
Query: 451 ERLWRPDVVLLNAAATTAGDYALRA---RVSNNGSVSXIKRLDIXTPISMQLDNWPNDMH 621
+RLW P+ +N+ + R+ + NG+V R+ + P S+ L N+P D+
Sbjct: 130 DRLWTPNSCFINSKVAQIHNSPFRSVFLMLFPNGTVMVNYRVRVKGPCSLDLSNFPLDLQ 189
Query: 622 TCTFXF 639
C+ +
Sbjct: 190 KCSLIY 195
>Z66500-2|CAA91304.2| 500|Caenorhabditis elegans Hypothetical
protein T05C12.2 protein.
Length = 500
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 445 SSERLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDMH 621
+S +LWRPDV+L N+ + + Y+ R VS+NG V + + +P D
Sbjct: 103 ASFKLWRPDVLLFNSVSESFDSTYSSRFIVSSNGDVQQNPPGIFRFVCQIDVTYYPFDKQ 162
Query: 622 TC 627
TC
Sbjct: 163 TC 164
>U88177-6|AAB42293.1| 446|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform a protein.
Length = 446
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/64 (21%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 442 VSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVSXIKRLDIXTPISMQLDNWPND 615
V SE +W+PD+++ N A + ++ ++ + G +S + + +Q++ +P D
Sbjct: 101 VPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKISLFRAIITDITCDLQMEKFPYD 160
Query: 616 MHTC 627
C
Sbjct: 161 QQIC 164
>U88177-5|AAT48618.1| 515|Caenorhabditis elegans Acetylcholine
receptor protein17, isoform b protein.
Length = 515
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/64 (21%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 442 VSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVSXIKRLDIXTPISMQLDNWPND 615
V SE +W+PD+++ N A + ++ ++ + G +S + + +Q++ +P D
Sbjct: 101 VPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKISLFRAIITDITCDLQMEKFPYD 160
Query: 616 MHTC 627
C
Sbjct: 161 QQIC 164
>AY523512-1|AAR98634.1| 499|Caenorhabditis elegans acetylcholine
receptor, nicotinic,alpha 9 like (58.1 kD) alternative
variant a protein.
Length = 499
Score = 34.3 bits (75), Expect = 0.11
Identities = 14/64 (21%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 442 VSSERLWRPDVVLLNAAATTAGDYALR--ARVSNNGSVSXIKRLDIXTPISMQLDNWPND 615
V SE +W+PD+++ N A + ++ ++ + G +S + + +Q++ +P D
Sbjct: 85 VPSEMIWKPDLLVYNNANMNIKENEMQTNVQIEHTGKISLFRAIITDITCDLQMEKFPYD 144
Query: 616 MHTC 627
C
Sbjct: 145 QQIC 148
>AF047656-7|AAC05108.2| 462|Caenorhabditis elegans Ligand-gated ion
channel protein 6 protein.
Length = 462
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +1
Query: 436 WL-VSSERLWRPDVVLLNAA-ATTAGDYALR-ARVSNNGSVSXIKRLDIXTPISMQLDNW 606
W+ +S+ R W PDV+ N D ++ A + NG + + + +P +++DN+
Sbjct: 100 WIKISASRAWIPDVIFTNGIDMDPLLDKDMQMADLRYNGEIRTSRPAVVSSPCPLEIDNF 159
Query: 607 PNDMHTC 627
P D+ C
Sbjct: 160 PYDVQKC 166
Score = 28.3 bits (60), Expect = 7.3
Identities = 21/102 (20%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +3
Query: 135 VVIKCRRLILFCYXFLLTCAIASAAECENATSLSLMIDSLLATYDRE-SPPDSKIVVNLT 311
++I C L++ LT + A E + + +L+ TYD + P D +V +T
Sbjct: 1 MLISCLLLLMLWILRFLT----AVAFLETSNTETLLQQLFNQTYDVDMKPSDDLTMVTIT 56
Query: 312 LH-LRHANIRESESTVRILADLQMNWIDKRLSWNAGGMGLQH 434
+ ++ +++ T++ + + W D L WN + ++
Sbjct: 57 PNTFILLSMDQTQETIQYSEEFLLRWYDPILHWNQSAVSYEN 98
>AC006808-1|AAF60813.1| 486|Caenorhabditis elegans Hypothetical
protein Y58G8A.1 protein.
Length = 486
Score = 33.9 bits (74), Expect = 0.15
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 3/69 (4%)
Frame = +1
Query: 430 STWLVSSERLWRPDVVLLNAAATTAGDY---ALRARVSNNGSVSXIKRLDIXTPISMQLD 600
ST ++S +LW+P + L N+A + L A V N G V
Sbjct: 98 STLSIASSKLWQPALQLYNSARGNSWSLYLTGLPAIVYNTGKVWSRGTFSFFVTCQFDFT 157
Query: 601 NWPNDMHTC 627
NWP D +C
Sbjct: 158 NWPYDQQSC 166
>Z67737-5|CAA91541.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.6 protein.
Length = 401
Score = 33.5 bits (73), Expect = 0.20
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 306 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 413
L +L+ ++E E V ++ +L W D RLSWN+
Sbjct: 79 LLYYLKLVEVQEPEEKVSVVLELVEQWYDPRLSWNS 114
>AL132862-1|CAB60529.2| 434|Caenorhabditis elegans Hypothetical
protein Y73F8A.2 protein.
Length = 434
Score = 33.5 bits (73), Expect = 0.20
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Frame = +1
Query: 454 RLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDMHT 624
+LW P+V ++N+ +T D + + NG++ R+ P M L N+P D
Sbjct: 135 KLWSPNVCIVNSKSTKVHDSPKPNILLMIFPNGTIWLNYRIRSEAPCQMNLRNFPLDSIR 194
Query: 625 CTFXF 639
C+ F
Sbjct: 195 CSLVF 199
>AF022973-5|AAC25797.4| 479|Caenorhabditis elegans Acetylcholine
receptor protein 15 protein.
Length = 479
Score = 33.5 bits (73), Expect = 0.20
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Frame = +3
Query: 240 MIDSLLATYDRESPP--DSK--IVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 404
+I+ L++ Y RE P DS +VV+L + L+ N+ E E + + A L+ W D+ L
Sbjct: 25 LINDLMSGYVREERPTLDSSKPVVVSLGVFLQQIINLSEKEEQLEVNAWLKFQWRDENLR 84
Query: 405 W 407
W
Sbjct: 85 W 85
>X86403-1|CAA60157.1| 575|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 575
Score = 33.1 bits (72), Expect = 0.26
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 442 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDM 618
V S+R+W PD+VL NA + V ++G V+ + + + ++ +P D
Sbjct: 137 VPSDRVWLPDIVLFNNADGNYEVSFKSNVFVDHHGDVTWVPPAMFKSSCRIDVEWFPFDE 196
Query: 619 HTCTFXF 639
CT F
Sbjct: 197 QCCTLVF 203
>U23525-1|AAK71377.1| 575|Caenorhabditis elegans Acetylcholine
receptor protein 2 protein.
Length = 575
Score = 33.1 bits (72), Expect = 0.26
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 442 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDM 618
V S+R+W PD+VL NA + V ++G V+ + + + ++ +P D
Sbjct: 137 VPSDRVWLPDIVLFNNADGNYEVSFKSNVFVDHHGDVTWVPPAMFKSSCRIDVEWFPFDE 196
Query: 619 HTCTFXF 639
CT F
Sbjct: 197 QCCTLVF 203
>AC084197-41|AAG23462.3| 493|Caenorhabditis elegans Ligand-gated
ion channel protein 10 protein.
Length = 493
Score = 33.1 bits (72), Expect = 0.26
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Frame = +3
Query: 204 AAECENATSL----SLMIDSLLATYDRESPP--DSKIVVNLTLHLRHA-NIRESESTVRI 362
A CEN +L S +++ + YDR P ++VN+T+ L ++E++
Sbjct: 57 ALNCENFRTLDNETSAILNDIFVGYDRRVLPFVQGPVLVNMTIVLGILIELKENQQLAAY 116
Query: 363 LADLQMNWIDKRLSWN 410
+ W D RLSW+
Sbjct: 117 VISHTQRWYDGRLSWD 132
>AC024783-1|AAY86294.1| 404|Caenorhabditis elegans Hypothetical
protein Y45G5AL.2 protein.
Length = 404
Score = 33.1 bits (72), Expect = 0.26
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = +3
Query: 279 PPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGGM-GLQHL 437
PP +I + L++ ++ + E E L D + +W D RLSW+ G+ H+
Sbjct: 79 PPRFEITIQLSM-MKLVEVVEPEEKATFLFDYRADWYDTRLSWDPEDYGGINHI 131
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +1
Query: 442 VSSERLWRPDVVLLNAAATTAGD--YALRARVSNNGSVSXIKRLDIXTPISMQLDNWPND 615
V ++W P+ +++ + D Y A + +NGS+ M + +P D
Sbjct: 133 VPRSKVWIPETTIVDCSEIKVFDNEYTRYAWLHSNGSIGMYIASVTSVVCQMDVYKFPMD 192
Query: 616 MHTCTFXFRF 645
HTC+ F F
Sbjct: 193 THTCSVNFLF 202
>Z81071-1|CAB03014.2| 510|Caenorhabditis elegans Hypothetical
protein F28F8.1 protein.
Length = 510
Score = 32.7 bits (71), Expect = 0.34
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +1
Query: 442 VSSERLWRPDVVLLNAAATTA--GDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPND 615
V + ++W+PDV++ N A + A V N G V + + ++ L +P D
Sbjct: 106 VPAHKIWKPDVLVYNNANMNVEENEMETNAIVDNTGRVMLFRSMITDISCNLNLQQFPFD 165
Query: 616 MHTCTFXF 639
C F
Sbjct: 166 QQICFVTF 173
>AY523513-1|AAR98635.1| 510|Caenorhabditis elegans acetylcholine
receptor, one ofnine alpha a7-like nicotinic
acetylcholine receptor subunits(58.6 kD) (acr-18)
protein.
Length = 510
Score = 32.7 bits (71), Expect = 0.34
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +1
Query: 442 VSSERLWRPDVVLLNAAATTA--GDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPND 615
V + ++W+PDV++ N A + A V N G V + + ++ L +P D
Sbjct: 106 VPAHKIWKPDVLVYNNANMNVEENEMETNAIVDNTGRVMLFRSMITDISCNLNLQQFPFD 165
Query: 616 MHTCTFXF 639
C F
Sbjct: 166 QQICFVTF 173
>Z93397-1|CAB07719.3| 550|Caenorhabditis elegans Hypothetical
protein ZC482.1 protein.
Length = 550
Score = 32.3 bits (70), Expect = 0.45
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%)
Frame = +1
Query: 448 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKRLDIXTPISMQLDNWPNDM 618
S+ +W PD L N + + R R++ +G V+ RL SM L N+P D
Sbjct: 132 SQNIWVPDTFLANDKHSYLHEVTERNKMLRINVDGKVAYGMRLTSTLSCSMNLRNFPLDS 191
Query: 619 HTCT 630
CT
Sbjct: 192 QNCT 195
>Z69302-6|CAL36504.1| 472|Caenorhabditis elegans Hypothetical
protein F40F8.11 protein.
Length = 472
Score = 32.3 bits (70), Expect = 0.45
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -2
Query: 840 GGGXGRXXGRTXXXRARGGFNXXG 769
GGG GR GR R RGGFN G
Sbjct: 169 GGGGGRGRGRGSGGRGRGGFNRGG 192
>L23649-2|AAA27911.2| 433|Caenorhabditis elegans Coelomocyte uptake
defective protein4 protein.
Length = 433
Score = 32.3 bits (70), Expect = 0.45
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 297 VVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 410
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AY611497-1|AAT42012.1| 433|Caenorhabditis elegans CUP-4 protein.
Length = 433
Score = 32.3 bits (70), Expect = 0.45
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 297 VVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 410
+V++ H+ H +I + E T+ + + M W D+ L W+
Sbjct: 74 IVDVHWHIIHVSINQREQTMTVHGHIYMRWFDEFLVWD 111
>AL110490-4|CAB54450.1| 474|Caenorhabditis elegans Hypothetical
protein Y48B6A.4 protein.
Length = 474
Score = 31.5 bits (68), Expect = 0.79
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +1
Query: 418 EWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDIXTPISM 591
E+G T L + LW+PD++L N+A + + VS+NG V + S+
Sbjct: 92 EYGNITTLQIPHGTLWKPDILLFNSANEHFDASFPVHMVVSSNGDVLFAPPGIVSFSCSL 151
Query: 592 QLDNWPNDMHTCTFXF 639
+ +P D C F
Sbjct: 152 SMTWFPYDQQVCYLKF 167
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 31.5 bits (68), Expect = 0.79
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = +1
Query: 424 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDIXTPISM 591
G V S+ +W PDVVL N A G+Y + +A+++ NG+V + +
Sbjct: 97 GVEVLYVPSDTIWLPDVVLYNNA---DGNYQVTIMTKAKLTYNGTVEWAPPAIYKSMCQI 153
Query: 592 QLDNWPNDMHTCTFXF 639
++ +P D C F
Sbjct: 154 DVEFFPFDRQQCEMKF 169
>AF016445-13|AAC69055.3| 371|Caenorhabditis elegans Ligand-gated
ion channel protein 1 protein.
Length = 371
Score = 31.5 bits (68), Expect = 0.79
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 279 PPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 410
PP +++ + + + L+ ++ E E V L D W D+RL WN
Sbjct: 51 PPITELKLTMAM-LKLVDVVEVEEKVTFLFDYLAEWTDQRLKWN 93
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 31.5 bits (68), Expect = 0.79
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = +1
Query: 424 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDIXTPISM 591
G V S+ +W PDVVL N A G+Y + +A+++ NG+V + +
Sbjct: 97 GVEVLYVPSDTIWLPDVVLYNNA---DGNYQVTIMTKAKLTYNGTVEWAPPAIYKSMCQI 153
Query: 592 QLDNWPNDMHTCTFXF 639
++ +P D C F
Sbjct: 154 DVEFFPFDRQQCEMKF 169
>Z99281-1|CAB16504.2| 439|Caenorhabditis elegans Hypothetical
protein Y57G11C.2 protein.
Length = 439
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/87 (20%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Frame = +3
Query: 165 FCYXFLLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSK----IVVNLTLHLRHA- 329
F + F L + + E + T + D L+ YD P + +++N++++
Sbjct: 6 FKFVFYLAISWCNLLEVDGITVAEQLKDVLMEGYDSSIRPVNNERDILIINISMNTMSVL 65
Query: 330 NIRESESTVRILADLQMNWIDKRLSWN 410
+ +E T+ ++ + W D+ L WN
Sbjct: 66 TLDPAEETINFSSEFILQWKDEFLFWN 92
>Z78417-4|CAB01685.2| 531|Caenorhabditis elegans Hypothetical
protein C35C5.5 protein.
Length = 531
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 5/90 (5%)
Frame = +3
Query: 171 YXFLLTCAIASAAECENATSLSLMIDSLLATYDRESPP----DSKIVVNLTLHL-RHANI 335
+ FLL I +S ++++LL Y++ P + V +L R ++
Sbjct: 9 HIFLLVIFILHIVTINANKHVSQLLENLLTDYNKAVRPVHNASDALKVKFGANLCRLIDV 68
Query: 336 RESESTVRILADLQMNWIDKRLSWNAGGMG 425
E + L+M W DK+L+WN G
Sbjct: 69 DEVNQVLTTSLWLEMQWYDKKLTWNPTDWG 98
Score = 27.9 bits (59), Expect = 9.7
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +1
Query: 418 EWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDIXTPISM 591
+WG ++ + S+++W PD+VL NA A++ ++G V + +
Sbjct: 96 DWGGVEYIHIPSDQIWIPDIVLYNNADGEPHITITSLAKIDHHGRVVWQPPSIYKSFCPI 155
Query: 592 QLDNWPNDMHTCTFXF 639
+ +P D TC F
Sbjct: 156 NIKYFPYDWQTCEMKF 171
>Z67737-4|CAA91539.2| 401|Caenorhabditis elegans Hypothetical
protein T01H10.5 protein.
Length = 401
Score = 30.7 bits (66), Expect = 1.4
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 306 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 410
L +L+ ++E V ++ +L W D RLSWN
Sbjct: 79 LLYYLKLVEVQEPAEKVSVVLELVERWYDPRLSWN 113
>Z67737-2|CAA91537.3| 400|Caenorhabditis elegans Hypothetical
protein T01H10.2 protein.
Length = 400
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 264 YDRESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNA 413
YD ++P + L L+ + E V ++ ++ W D RLSWNA
Sbjct: 64 YDPDAPKRYNYSIML-YSLKLVEVNEPAEKVAVVMEIMEYWYDIRLSWNA 112
>Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical
protein C31H5.3 protein.
Length = 554
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 457 LWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDMHTCTF 633
+W+PDV+L N+ + + A V G+V+ I I + ++ + +P D CT
Sbjct: 106 IWKPDVLLYNSVDQQFDSTWPVNAVVLYTGNVTWIPPAIIRSSCAIDIAYFPFDTQHCTM 165
Query: 634 XF 639
F
Sbjct: 166 KF 167
>U53337-6|AAA96188.2| 510|Caenorhabditis elegans Acetylcholine
receptor protein 10 protein.
Length = 510
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +1
Query: 454 RLWRPDVVLLNAAATT-AGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDMHTCT 630
++WRPD++L N+A+ + V N G V+ I M + +P D C
Sbjct: 48 QIWRPDILLYNSASEDFDSSFKSNEVVYNTGEVNWIPPGIFRASCKMDITYFPFDDQVCY 107
Query: 631 FXF 639
F
Sbjct: 108 LKF 110
>U28735-8|AAF99957.2| 434|Caenorhabditis elegans Acetylcholine
receptor protein 22 protein.
Length = 434
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +1
Query: 418 EW-GCSTWLVSSERLWRPDVVLLNAAATT--AGDYALRARVSNNGSVSXIKRLDIXTPIS 588
EW G ++ ++W PD + N T ++ R R V K +D+ P+S
Sbjct: 103 EWNGIERIIIPKSQIWIPDGYIFNTVEETEPLENHNARVRYDGRVEVDFNKLVDLTCPMS 162
Query: 589 MQLDNWPNDMHTCTFXF 639
+ ++P D+ C F
Sbjct: 163 VL--SFPFDVQLCALQF 177
>AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine
receptor (63.2 kD)(acr-19) protein.
Length = 554
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 457 LWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDMHTCTF 633
+W+PDV+L N+ + + A V G+V+ I I + ++ + +P D CT
Sbjct: 106 IWKPDVLLYNSVDQQFDSTWPVNAVVLYTGNVTWIPPAIIRSSCAIDIAYFPFDTQHCTM 165
Query: 634 XF 639
F
Sbjct: 166 KF 167
>AY519852-1|AAR89633.1| 434|Caenorhabditis elegans acetylcholine
receptor (51.1 kD)(acr-22) protein.
Length = 434
Score = 30.3 bits (65), Expect = 1.8
Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
Frame = +1
Query: 418 EW-GCSTWLVSSERLWRPDVVLLNAAATT--AGDYALRARVSNNGSVSXIKRLDIXTPIS 588
EW G ++ ++W PD + N T ++ R R V K +D+ P+S
Sbjct: 103 EWNGIERIIIPKSQIWIPDGYIFNTVEETEPLENHNARVRYDGRVEVDFNKLVDLTCPMS 162
Query: 589 MQLDNWPNDMHTCTFXF 639
+ ++P D+ C F
Sbjct: 163 VL--SFPFDVQLCALQF 177
>AC006834-2|AAF40009.1| 562|Caenorhabditis elegans Acetylcholine
receptor protein 6 protein.
Length = 562
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +3
Query: 330 NIRESESTVRILADLQMNWIDKRLSWNA---GGMGLQHLAG 443
++ E + + + L +W+D RLSWN G + L H G
Sbjct: 44 DVHEKDQVITLKGTLIHHWLDYRLSWNPDEFGNITLMHFPG 84
>AC006618-5|ABB88234.1| 513|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 2, isoform b protein.
Length = 513
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Frame = +1
Query: 454 RLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDMHT 624
++W+PDV NA + + +GS+ R+ + ++ L+ WP D
Sbjct: 110 KMWKPDVYFANARIAEFHEVTQPNFLVWIQPDGSILYDTRISMVVVCTLNLEKWPLDSQR 169
Query: 625 C 627
C
Sbjct: 170 C 170
>AC006618-4|ABB88233.1| 546|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 2, isoform a protein.
Length = 546
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Frame = +1
Query: 454 RLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDMHT 624
++W+PDV NA + + +GS+ R+ + ++ L+ WP D
Sbjct: 110 KMWKPDVYFANARIAEFHEVTQPNFLVWIQPDGSILYDTRISMVVVCTLNLEKWPLDSQR 169
Query: 625 C 627
C
Sbjct: 170 C 170
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.9 bits (64), Expect = 2.4
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +1
Query: 736 PICPXXCPXRDPXXVEXPPXPXPXGPPGXXPXPP 837
PICP P P PP P P PP P PP
Sbjct: 49 PICP---PQFCPPPPMCPPPPPPPPPPMCPPPPP 79
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 442 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDM 618
VS +++W PD+VL NA + +++ G + + + + ++ +P D
Sbjct: 107 VSPDKVWLPDIVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDVEFFPFDE 166
Query: 619 HTCTFXF 639
CT F
Sbjct: 167 QVCTLVF 173
>X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 493
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 442 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDM 618
VS +++W PD+VL NA + +++ G + + + + ++ +P D
Sbjct: 107 VSPDKVWLPDIVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDVEFFPFDE 166
Query: 619 HTCTFXF 639
CT F
Sbjct: 167 QVCTLVF 173
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 442 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDM 618
VS +++W PD+VL NA + +++ G + + + + ++ +P D
Sbjct: 107 VSPDKVWLPDIVLFNNADGNYEVSFMCNVVINHKGDMLWVPPAIYKSSCIIDVEFFPFDE 166
Query: 619 HTCTFXF 639
CT F
Sbjct: 167 QVCTLVF 173
>Z70266-4|CAA94206.3| 534|Caenorhabditis elegans Hypothetical
protein C40C9.2 protein.
Length = 534
Score = 29.1 bits (62), Expect = 4.2
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +3
Query: 150 RRLILFCYXF-LLTCAIASAAECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRH 326
R L C F LLT +SA E L D S P +VV++ ++L+
Sbjct: 7 RLTALHCVLFHLLTEVHSSADEYRLLADLRHNYDPYERPVANASEP---LVVSVKIYLQQ 63
Query: 327 A-NIRESESTVRILADLQMNWIDKRLSWNAGGMG 425
++ E + ++A ++ W D +L W+ G
Sbjct: 64 ILDVDEKNQVITLVAWIEYQWTDYKLKWDPSEYG 97
>AF022985-15|AAB69969.2| 435|Caenorhabditis elegans Hypothetical
protein T15B7.16 protein.
Length = 435
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +1
Query: 451 ERLWRPDVVLLNAAAT---TAGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDMH 621
E+LW P+V +N+ T ++ + + NG+V RL + +P + L +P D+
Sbjct: 113 EKLWTPNVCFVNSKKTEIHSSPTPNIFLMIYPNGTVWVNYRLQVQSPCMVDLVLFPMDIM 172
Query: 622 TC 627
C
Sbjct: 173 NC 174
>Z78540-1|CAB01736.1| 409|Caenorhabditis elegans Hypothetical
protein C33G3.3 protein.
Length = 409
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +3
Query: 216 ENATSLS-LMIDSLLATYDRESPPDSKIVVNLT-LHLRHANIRESESTVRILADLQMNWI 389
E+A L+ L I +A+ + +N L+H + E + I L+++W
Sbjct: 33 ESAKKLAKLNIPHAIASIPPNYLSQQPVTINFAQFTLQHFELNEHLKDISIHGYLELSWH 92
Query: 390 DKRLSWN 410
D RL WN
Sbjct: 93 DDRLMWN 99
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 28.7 bits (61), Expect = 5.5
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +1
Query: 745 PXXCPXRDPXXVEXPPXPXPXGPPG 819
P CP +DP V+ P P GPPG
Sbjct: 134 PITCPPKDPSCVKCP--EGPAGPPG 156
>U88167-6|AAB42223.1| 461|Caenorhabditis elegans Acetylcholine
receptor protein 11 protein.
Length = 461
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +1
Query: 445 SSERLWRPDVVLLNAAA 495
SS+ +W+PDV+L N+AA
Sbjct: 105 SSDHIWKPDVLLYNSAA 121
>U10401-10|AAA19062.2| 476|Caenorhabditis elegans Hypothetical
protein T20B12.9 protein.
Length = 476
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +3
Query: 210 ECENATSLSLMIDSLLATYDRESPPDSKIVVNLTLHLRHANIRE-SESTVRILADLQMN- 383
E + +L +ID+LL YD P+++ VN+T+ L + SE T D+ +
Sbjct: 9 EFNSRINLGKLIDTLLTDYDTHLLPEAE-GVNVTIELHVQGVSGISEITGDFSLDVMYSE 67
Query: 384 -WIDKRLSW 407
W D RLS+
Sbjct: 68 IWQDPRLSF 76
>AF040661-8|AAG24222.1| 327|Caenorhabditis elegans Hypothetical
protein W10G11.16 protein.
Length = 327
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +1
Query: 451 ERLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDMH 621
E++WRPD NA + R+ +G V R+ I ++ L +P+D
Sbjct: 35 EKIWRPDPFFANAKEAEFHEVTFLNFLMRIFPDGLVLYETRVKIKPSCNLILCKYPHDKQ 94
Query: 622 TC 627
TC
Sbjct: 95 TC 96
>AF016664-8|AAY44018.1| 397|Caenorhabditis elegans Hypothetical
protein D2062.12 protein.
Length = 397
Score = 28.7 bits (61), Expect = 5.5
Identities = 10/34 (29%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Frame = +3
Query: 312 LHLRHAN-IRESESTVRILADLQMNWIDKRLSWN 410
LH+ H + I++ + +++ W+D+RL WN
Sbjct: 62 LHVDHIHDIQDEQGVLKMALTFTFTWMDERLMWN 95
>Z67737-3|CAA91538.2| 399|Caenorhabditis elegans Hypothetical
protein T01H10.3 protein.
Length = 399
Score = 28.3 bits (60), Expect = 7.3
Identities = 10/35 (28%), Positives = 18/35 (51%)
Frame = +3
Query: 306 LTLHLRHANIRESESTVRILADLQMNWIDKRLSWN 410
L L+ + E + V ++ ++ W D RL+WN
Sbjct: 78 LLFSLKLVEVTEPQEKVSVVMEVMEYWFDARLTWN 112
>U39855-1|AAA81080.3| 615|Caenorhabditis elegans Hypothetical
protein F18G5.4 protein.
Length = 615
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +1
Query: 454 RLWRPDVVLLNAAATT--AGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDMHTC 627
R+W+PD++L+N A A + V+++G+V+ + + +++ +P D C
Sbjct: 193 RIWKPDIILVNNAIREYYASLVSTDVMVTSDGNVTWLFSALFRSSCPIRVRYYPFDDQQC 252
Query: 628 TFXF 639
F
Sbjct: 253 DLKF 256
>AC006816-3|AAK85510.3| 508|Caenorhabditis elegans Hypothetical
protein Y71D11A.5 protein.
Length = 508
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = +1
Query: 451 ERLWRPDVVLLNAAATTAGDYA---LRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDMH 621
E+LW P+ +N+ + + NG+V RL + P M L +P D
Sbjct: 143 EKLWTPNSCFINSKTADIHKSPFPNIFLMIYANGTVWTNYRLKLQGPCIMDLTKFPFDNV 202
Query: 622 TCTFXF 639
TC+ F
Sbjct: 203 TCSLTF 208
>Z92837-3|CAB07402.3| 502|Caenorhabditis elegans Hypothetical
protein R03E1.3 protein.
Length = 502
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 300 VNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLSWNA 413
VN+ L + H + E E T + + WID+ + W+A
Sbjct: 54 VNVFLSIAHVEKVDEHEQTALVHGHIWATWIDEYMQWDA 92
>Z81093-1|CAB03148.2| 507|Caenorhabditis elegans Hypothetical
protein F09E8.7 protein.
Length = 507
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 442 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDM 618
V+ E++W PD+VL NA + + + G+V + + + ++ +P D
Sbjct: 115 VAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWVPPAIYKSSCIIDVEFFPFDD 174
Query: 619 HTCTFXF 639
C+ F
Sbjct: 175 QLCSLTF 181
>X98601-1|CAA67198.1| 507|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit protein.
Length = 507
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 442 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDM 618
V+ E++W PD+VL NA + + + G+V + + + ++ +P D
Sbjct: 115 VAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWVPPAIYKSSCIIDVEFFPFDD 174
Query: 619 HTCTFXF 639
C+ F
Sbjct: 175 QLCSLTF 181
>X98246-1|CAA66902.1| 507|Caenorhabditis elegans nicotinic
acetylcholine receptor protein.
Length = 507
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 442 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDM 618
V+ E++W PD+VL NA + + + G+V + + + ++ +P D
Sbjct: 115 VAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWVPPAIYKSSCIIDVEFFPFDD 174
Query: 619 HTCTFXF 639
C+ F
Sbjct: 175 QLCSLTF 181
>AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical
protein C04C3.2 protein.
Length = 464
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/62 (22%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = +3
Query: 240 MIDSLLATYDRESPPDSK----IVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKRLS 404
+I+++ YD+ P ++ ++V++T+ L +RE++ + W D +L+
Sbjct: 44 LIETIQRRYDKRVRPFAESNRPVIVHMTIVLGILTEVRENQQVASFVISHVQKWRDPKLA 103
Query: 405 WN 410
WN
Sbjct: 104 WN 105
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,176,510
Number of Sequences: 27780
Number of extensions: 386729
Number of successful extensions: 1677
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 1273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1630
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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