Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_F21
(853 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 36 4e-04
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 36 5e-04
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 33 0.003
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 33 0.003
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 33 0.003
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 33 0.004
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 32 0.006
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 32 0.008
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 31 0.010
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 31 0.013
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 31 0.018
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 31 0.018
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 31 0.018
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 30 0.024
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 30 0.031
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.041
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.054
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 29 0.054
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 29 0.054
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 28 0.095
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 28 0.13
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 28 0.13
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 27 0.17
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 26 0.38
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 25 1.2
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 2.7
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 3.6
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 6.2
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 6.2
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 6.2
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 6.2
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 6.2
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 6.2
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 22 8.2
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 36.3 bits (80), Expect = 4e-04
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +1
Query: 451 ERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKRLDIXTPISMQLDNWPNDMH 621
ER+WRPD N + + R+S +G + RL I M+L N+P D
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 622 TC 627
+C
Sbjct: 175 SC 176
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 35.9 bits (79), Expect = 5e-04
Identities = 19/69 (27%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Frame = +1
Query: 442 VSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPN 612
V S+ +W PD+ + N+ T G V ++GSVS + + + +WP
Sbjct: 119 VKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPY 178
Query: 613 DMHTCTFXF 639
D H C F
Sbjct: 179 DTHRCRINF 187
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 33.5 bits (73), Expect = 0.003
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 213 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 377
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 378 MNWIDKRLSWNA 413
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 33.5 bits (73), Expect = 0.003
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 442 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDM 618
V S+ +WRPD+VL NA A +A + + G V + + ++ +P D
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 619 HTCTFXF 639
TC F
Sbjct: 165 QTCVLKF 171
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 33.1 bits (72), Expect = 0.003
Identities = 19/67 (28%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +1
Query: 442 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDM 618
V S+ +WRPD+VL NA A +A ++ G V + + ++ +P D
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 619 HTCTFXF 639
TC F
Sbjct: 161 QTCVMKF 167
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 32.7 bits (71), Expect = 0.004
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 219 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 386
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 387 IDKRLSWNAG 416
+D+RL++ G
Sbjct: 62 VDRRLAFQGG 71
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 32.3 bits (70), Expect = 0.006
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +1
Query: 442 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDM 618
+ RLW+PDV++ N+A G Y V NNG+ + + + + +P D
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 619 HTCTFXF 639
C F
Sbjct: 160 QRCEMKF 166
Score = 22.2 bits (45), Expect = 6.2
Identities = 18/90 (20%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Frame = +3
Query: 171 YXFLLTCAIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NI 335
+ + A+A++ + +++ LL TY+ E P ++ +V++ L L ++
Sbjct: 4 WTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDV 63
Query: 336 RESESTVRILADLQMNWIDKRLSWNAGGMG 425
E + L++ W D + WN G
Sbjct: 64 DEKNQLLITNLWLKLEWNDVNMRWNVSDYG 93
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 31.9 bits (69), Expect = 0.008
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +1
Query: 451 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSXIKRLDIXTPISMQLDNWPNDM 618
+++W+PD+VL N A G+Y +R + + NG V + + ++ + +P D
Sbjct: 106 DKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 619 HTCTFXF 639
TC F
Sbjct: 163 QTCIMKF 169
Score = 23.8 bits (49), Expect = 2.0
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 291 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNA---GGMGLQHL 437
K+ VN L ++ N+ E ++ L+ W D +L W+ GG+G+ L
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRL 103
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 31.5 bits (68), Expect = 0.010
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +1
Query: 442 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDIXTPISMQLDNWP 609
V S+ +WRPD+VL N A G+Y + +A V +G V + S+ ++ +P
Sbjct: 105 VPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 610 NDMHTC 627
D+ TC
Sbjct: 162 YDVQTC 167
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 31.1 bits (67), Expect = 0.013
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +1
Query: 448 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSXIKRLDIXTPISMQLDNWPNDM 618
+E++W PD N + D R R+S +GSV+ R M L +P D
Sbjct: 113 AEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDS 172
Query: 619 HTCT 630
CT
Sbjct: 173 QNCT 176
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 30.7 bits (66), Expect = 0.018
Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 442 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDM 618
++ +LW+PD+++ N+A G Y V++NGS + + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 619 HTCTFXF 639
C F
Sbjct: 191 QHCDMKF 197
Score = 24.6 bits (51), Expect = 1.2
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +3
Query: 240 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 404
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 405 WNAGGMG 425
WN G
Sbjct: 118 WNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 30.7 bits (66), Expect = 0.018
Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 442 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDM 618
++ +LW+PD+++ N+A G Y V++NGS + + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 619 HTCTFXF 639
C F
Sbjct: 191 QHCDMKF 197
Score = 24.6 bits (51), Expect = 1.2
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +3
Query: 240 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 404
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 405 WNAGGMG 425
WN G
Sbjct: 118 WNESEYG 124
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 30.7 bits (66), Expect = 0.018
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +1
Query: 418 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSXIKRLDIXTPISM 591
E+G T L V SE +W PD+VL N A G + +A + G V + +
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEI 147
Query: 592 QLDNWPNDMHTCTFXF 639
+ +P D TC F
Sbjct: 148 DVRYFPFDQQTCFMKF 163
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 30.3 bits (65), Expect = 0.024
Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 442 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDM 618
++ +LW+PD+++ N+A G Y V++NGS + + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 619 HTCTFXF 639
C F
Sbjct: 123 QHCDMKF 129
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 330 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 425
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 29.9 bits (64), Expect = 0.031
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = +1
Query: 424 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDIXTPISM 591
G V SE +W PD+VL N A G+Y + +A + G VS + +
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEI 160
Query: 592 QLDNWPNDMHTCTFXF 639
++ +P D +C F
Sbjct: 161 NVEYFPFDEQSCIMKF 176
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 29.5 bits (63), Expect = 0.041
Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 442 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDM 618
++ +LW+PD+++ N+A G Y V+++GS + + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDD 122
Query: 619 HTCTFXF 639
C F
Sbjct: 123 QHCDMKF 129
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 330 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 425
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 29.1 bits (62), Expect = 0.054
Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 442 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDM 618
++ +LW+PD+++ N+A G Y V+++GS + + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDD 122
Query: 619 HTCTFXF 639
C F
Sbjct: 123 QHCDMKF 129
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 330 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 425
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 29.1 bits (62), Expect = 0.054
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Frame = +3
Query: 240 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 398
++D++L YD E+ D +V + L +R A I + + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 399 LSWNAGGMGLQHL 437
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 29.1 bits (62), Expect = 0.054
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Frame = +1
Query: 424 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSXIKRLDIXTPISM 591
G T V SE +W PD+VL N A G+Y + +A + + G V + +
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 147
Query: 592 QLDNWPNDMHTCTFXF 639
++ +P D TC F
Sbjct: 148 DVEYFPFDEQTCFMKF 163
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 28.3 bits (60), Expect = 0.095
Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 442 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDM 618
++ +LW+PD+++ N+A G Y V+++GS + + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 619 HTCTFXF 639
C F
Sbjct: 123 QHCDMKF 129
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 330 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 425
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 27.9 bits (59), Expect = 0.13
Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 442 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDM 618
++ +LW+PD+++ N+A G Y V+++GS + + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDD 122
Query: 619 HTCTFXF 639
C F
Sbjct: 123 QHCDMKF 129
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 330 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 425
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 27.9 bits (59), Expect = 0.13
Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 442 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSXIKRLDIXTPISMQLDNWPNDM 618
++ +LW+PD+++ N+A G Y V+++GS + + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDD 122
Query: 619 HTCTFXF 639
C F
Sbjct: 123 QHCDMKF 129
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 330 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 425
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 27.5 bits (58), Expect = 0.17
Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = +1
Query: 442 VSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSXIKRLDIXTPISMQLDNWPND 615
V R+WRPD +L N A + VS+ G V + + + ++ +P D
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
Query: 616 MHTC 627
C
Sbjct: 142 EQRC 145
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 26.2 bits (55), Expect = 0.38
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +3
Query: 240 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 398
++D++L YD E+ D VV + + +R + I + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 399 LSWNAGGMGLQHL 437
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 24.6 bits (51), Expect = 1.2
Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
Frame = +1
Query: 451 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSXIKRLDIXTPISMQLDNWPND 615
+ LW+PD LNA + AL + S+ N +V R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 616 MHTC 627
+ C
Sbjct: 127 IQIC 130
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.4 bits (48), Expect = 2.7
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +3
Query: 219 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 386
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 387 IDKRLSW 407
D RL++
Sbjct: 68 TDPRLAF 74
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 23.0 bits (47), Expect = 3.6
Identities = 11/33 (33%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Frame = +1
Query: 745 PXXCPXRDPXXVEX--PPXPXPXGPPGXXPXPP 837
P P + P + PP P PPG P P
Sbjct: 23 PQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAP 55
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.2 bits (45), Expect = 6.2
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +1
Query: 526 RVSNNGSVSXIKRLDIXTPISMQLDNWPNDMHTCTF 633
R+ NG+V+ + R + +L+ +P D C+F
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSF 202
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.2 bits (45), Expect = 6.2
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +1
Query: 526 RVSNNGSVSXIKRLDIXTPISMQLDNWPNDMHTCTF 633
R+ NG+V+ + R + +L+ +P D C+F
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSF 202
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.2 bits (45), Expect = 6.2
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +1
Query: 526 RVSNNGSVSXIKRLDIXTPISMQLDNWPNDMHTCTF 633
R+ NG+V+ + R + +L+ +P D C+F
Sbjct: 218 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSF 253
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.2 bits (45), Expect = 6.2
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +1
Query: 526 RVSNNGSVSXIKRLDIXTPISMQLDNWPNDMHTCTF 633
R+ NG+V+ + R + +L+ +P D C+F
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSF 202
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.2 bits (45), Expect = 6.2
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +3
Query: 219 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 386
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 387 IDKRLSW 407
D RL++
Sbjct: 68 TDPRLAF 74
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.2 bits (45), Expect = 6.2
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 236 GQ*CCVFAFCRTSYSTSEEKXVTE 165
G+ CC F T Y + K VT+
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQ 625
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 21.8 bits (44), Expect = 8.2
Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +3
Query: 273 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGGMGLQHLAGVL- 449
E + ++N L + + + ++ + D + N + + S AGG+ + AG++
Sbjct: 233 EGDDQQRAIINTLLSISASCVIAFATSALVSKDSKFNMVHIQNSTLAGGVAIGTAAGMMC 292
Query: 450 ---GTLV 461
GTL+
Sbjct: 293 QPVGTLI 299
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,536
Number of Sequences: 438
Number of extensions: 5561
Number of successful extensions: 49
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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