Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_F18
(989 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 36 0.038
05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747 35 0.12
01_01_0716 - 5548908-5549235,5549327-5549768,5549847-5549982 29 0.30
01_03_0005 + 11568545-11569119,11569179-11569191 32 0.81
05_05_0392 + 24629528-24630442 27 1.1
02_02_0029 + 6204557-6204734,6205105-6205207,6205970-6206108 31 1.4
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 31 1.9
01_05_0433 - 22094784-22095659 30 2.5
04_04_0009 + 22134160-22134696 30 3.3
04_03_0803 - 19835284-19836050,19836337-19836418 30 3.3
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 3.3
02_05_0686 - 30900748-30902167,30903442-30904742 29 4.3
10_07_0134 + 13289641-13290216,13290435-13290914 29 5.7
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 29 5.7
07_03_1136 + 24218601-24218734,24218769-24219906 29 5.7
05_01_0225 - 1668176-1668190,1668557-1668570,1669139-1669277,166... 29 5.7
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646... 29 5.7
02_02_0307 - 8809724-8811589,8811681-8811762,8812130-8812242,881... 29 7.6
01_07_0188 - 41866689-41866763,41866889-41867155,41867277-418677... 29 7.6
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 36.3 bits (80), Expect = 0.038
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = -1
Query: 539 PSXXGGGGXGXAXPPPXHPXXXFXPPPXXKKKXGGGGXXXXXPXKKXXGGGGXPGG 372
P G G G PPP HP PPP G G P P G
Sbjct: 310 PGAGAGAGTGAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPG 365
Score = 32.7 bits (71), Expect = 0.47
Identities = 18/58 (31%), Positives = 18/58 (31%)
Frame = +2
Query: 584 PPPXXXGAXPXKXKKKKKXXXPPXXXXPPXXXGGGXGXSXGVXXXPXXPPXXPXPXPP 757
PPP P PP PP G G G G P P P P PP
Sbjct: 282 PPPPAPPPLPPSHHHHHGHHPPPPHPLPP---GAGAGAGTGAPPPPPAHPAAPAPPPP 336
>05_01_0364 + 2855760-2855801,2855940-2856015,2856759-2857747
Length = 368
Score = 34.7 bits (76), Expect = 0.12
Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Frame = -1
Query: 524 GGGXGXAXPP---PXHPXXXFXPPPXXKKKXGGGGXXXXXPXKKXXGGGGXPGG 372
GGG G PP H PP GGGG KK GGGG G
Sbjct: 181 GGGAGAVAPPFAMTPHGKQPVAPPGNGNGGGGGGGGGGKKKGKKGGGGGGGGNG 234
>01_01_0716 - 5548908-5549235,5549327-5549768,5549847-5549982
Length = 301
Score = 28.7 bits (61), Expect(2) = 0.30
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = -1
Query: 524 GGGXGXAXPPPXHPXXXFXPPPXXKKKXGGGGXXXXXPXKKXXGGGGXP 378
GGG G P P H + P GGG GGGG P
Sbjct: 127 GGGYGGGSPAPSHGGGAYGSSP--STPSGGGSSPTPSHGGGAYGGGGAP 173
Score = 23.4 bits (48), Expect(2) = 0.30
Identities = 18/70 (25%), Positives = 18/70 (25%), Gaps = 2/70 (2%)
Frame = -1
Query: 848 PXXGPXXTPXPPP--RGXGGXXXDVEKXQXXPRGXXXXXXXGGXGGXKXPPXXXPXPPPX 675
P G TP P P G GG P G G PP
Sbjct: 64 PGHGGTTTPTPIPGHHGGGGSSGTTPSHGGGPSGGALPSPSHGGAAPSHGGGYGASPPVT 123
Query: 674 XXGGXXXGGG 645
G GGG
Sbjct: 124 PSPGGGYGGG 133
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 31.9 bits (69), Expect = 0.81
Identities = 16/32 (50%), Positives = 16/32 (50%)
Frame = +1
Query: 433 PPPXFFFXXGGGXXXXXGXXGGGXAXPXPPPP 528
PPP GGG G GGG A P PPPP
Sbjct: 114 PPPTGGGGGGGGGWQQGG--GGGGAYPTPPPP 143
Score = 31.1 bits (67), Expect = 1.4
Identities = 23/87 (26%), Positives = 27/87 (31%), Gaps = 6/87 (6%)
Frame = -1
Query: 707 PPXXXPXPPPXXXGGXXXGGGXXFFFF-----FFXXGGXPPXXXGXEKXXXPKXXXXXXX 543
P P PP GG GGG + + GG G P
Sbjct: 65 PTPQCPPPPSYPSGGGGGGGGGTVMYTSPPPPYSGGGGGSSTGGGGIYYPPPTGGGGGGG 124
Query: 542 XPSXXGGGGXGX-AXPPPXHPXXXFXP 465
GGGG G PPP +P + P
Sbjct: 125 GGWQQGGGGGGAYPTPPPPNPFLPYFP 151
>05_05_0392 + 24629528-24630442
Length = 304
Score = 27.5 bits (58), Expect(2) = 1.1
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +1
Query: 484 GXXGGGXAXPXPPPP 528
G GGG A P PPPP
Sbjct: 164 GRPGGGRASPSPPPP 178
Score = 22.6 bits (46), Expect(2) = 1.1
Identities = 11/38 (28%), Positives = 11/38 (28%)
Frame = +1
Query: 646 PPPXXXPPXXXGGGXGXXXGGXXXPPXPPXXSXXXXPR 759
PP G G G PP PP PR
Sbjct: 199 PPDQRRTAASAGAAAGAASGPQRKPPVPPRPCGRASPR 236
>02_02_0029 + 6204557-6204734,6205105-6205207,6205970-6206108
Length = 139
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -1
Query: 500 PPPXHPXXXFXPPPXXKKKXGGGGXXXXXPXKKXXGGGGXPGG 372
PPP P F PP GGGG GGG PGG
Sbjct: 36 PPPPPP---FFPPQWAPPVAGGGGPFAGGGGYGSGAGGGGPGG 75
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 30.7 bits (66), Expect = 1.9
Identities = 22/78 (28%), Positives = 23/78 (29%)
Frame = -1
Query: 605 PPXXXGXEKXXXPKXXXXXXXXPSXXGGGGXGXAXPPPXHPXXXFXPPPXXKKKXGGGGX 426
PP G P P GG G PP + P GGGG
Sbjct: 339 PPSSYGGGPGSYPPSYGAPPPNPPYSGGAPGGQGSLPPSYDGGYGGRP-----MPGGGGP 393
Query: 425 XXXXPXKKXXGGGGXPGG 372
P GGGG GG
Sbjct: 394 GAPPPYHGGGGGGGGGGG 411
Score = 30.3 bits (65), Expect = 2.5
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 731 GGXGGXKXPPXXXPXPPPXXXGGXXXGGG 645
GG GG P P PP GG GGG
Sbjct: 380 GGYGGRPMPGGGGPGAPPPYHGGGGGGGG 408
>01_05_0433 - 22094784-22095659
Length = 291
Score = 30.3 bits (65), Expect = 2.5
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -1
Query: 527 GGGGXGXAXPPPXHPXXXFXPPPXXKKK 444
GGGG G A PPP P PPP + K
Sbjct: 34 GGGGGGAARPPPMVP-GRVPPPPMYRPK 60
>04_04_0009 + 22134160-22134696
Length = 178
Score = 29.9 bits (64), Expect = 3.3
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = -1
Query: 518 GXGXAXPPPXHPXXXFXPPPXXKKKXGGGGXXXXXPXKKXXGGGGXPG 375
G G PPP PPP K GGGG GGGG G
Sbjct: 58 GGGSTAPPP--------PPPSSSGKSGGGGGSNIREAAASGGGGGVWG 97
>04_03_0803 - 19835284-19836050,19836337-19836418
Length = 282
Score = 29.9 bits (64), Expect = 3.3
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -3
Query: 756 GGXGXGXXGGXXGXXXTPXXXPXPPPXXXGGXXXXGG 646
GG G G GG G P P PPP GG
Sbjct: 235 GGCGHGDCGGWCGGHRPPINCPAPPPPCCQQQPWGGG 271
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.9 bits (64), Expect = 3.3
Identities = 34/128 (26%), Positives = 35/128 (27%)
Frame = +2
Query: 380 GXPPPPXFFFXGKXXXXXPPPXFFFXXGGXXXXXXGXXGGXXXTPXPPPXXXXXXXXXXX 559
G PPPP G PPP G G P PPP
Sbjct: 1107 GAPPPPPP--PGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGL------- 1157
Query: 560 XFWGGAXSPPPXXXGAXPXKXKKKKKXXXPPXXXXPPXXXGGGXGXSXGVXXXPXXPPXX 739
GG +PPP PP PP GG G G P P
Sbjct: 1158 ---GGPPAPPPPAGFRGGTPPPNAHGGVAPPP---PPPRGHGGVG---GPPTPPGAPAPP 1208
Query: 740 PXPXPPGG 763
P PGG
Sbjct: 1209 MPPGVPGG 1216
Score = 28.7 bits (61), Expect = 7.6
Identities = 20/64 (31%), Positives = 20/64 (31%)
Frame = -1
Query: 839 GPXXTPXPPPRGXGGXXXDVEKXQXXPRGXXXXXXXGGXGGXKXPPXXXPXPPPXXXGGX 660
G P PPPRG GG V P G GG PP P P G
Sbjct: 1180 GGVAPPPPPPRGHGG----VGGPPTPPGAPAPPMPPGVPGGPPPPPGGRGLPAPPGGRGV 1235
Query: 659 XXGG 648
G
Sbjct: 1236 VGHG 1239
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.5 bits (63), Expect = 4.3
Identities = 18/60 (30%), Positives = 18/60 (30%)
Frame = +2
Query: 584 PPPXXXGAXPXKXKKKKKXXXPPXXXXPPXXXGGGXGXSXGVXXXPXXPPXXPXPXPPGG 763
PPP A P K PP PP P P P P PPGG
Sbjct: 317 PPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPA----KGPPPPPPPKGPSPPPPPPPGG 372
>10_07_0134 + 13289641-13290216,13290435-13290914
Length = 351
Score = 29.1 bits (62), Expect = 5.7
Identities = 22/65 (33%), Positives = 23/65 (35%), Gaps = 11/65 (16%)
Frame = -1
Query: 527 GGGGXGXAXPPPXHPXXXFXP--------PPXXKKKXG---GGGXXXXXPXKKXXGGGGX 381
GG G PPP F P PP + G GGG GGGG
Sbjct: 40 GGHGGHHLLPPPPPSLSPFLPDLAMDAPPPPMYEASGGDGGGGGAASEDEEDGCGGGGGG 99
Query: 380 PGGEK 366
GGEK
Sbjct: 100 GGGEK 104
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 29.1 bits (62), Expect = 5.7
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = -1
Query: 539 PSXXGGGGXGXAXPPPXHPXXXFXPPPXXKKKXGGGGXXXXXPXKKXXGGGGXPGG 372
PS GGGG PPP PPP + P GGG GG
Sbjct: 31 PSCGGGGGGAGPTPPP--------PPPPPHHRRARSEVAFRFPDDLGLGGGADGGG 78
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.1 bits (62), Expect = 5.7
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = -1
Query: 539 PSXXGGGGXGXAXPPPXHPXXXFXPPPXXKKKXGGGGXXXXXPXKKXXGGGGXPGG 372
P GGGG G P GGGG P + GGGG GG
Sbjct: 349 PDLGGGGGGGGGGTK-----VRVCAPKDISGGGGGGGGMLDKPDEAGGGGGGGSGG 399
>05_01_0225 -
1668176-1668190,1668557-1668570,1669139-1669277,
1669398-1669520,1669710-1669940
Length = 173
Score = 29.1 bits (62), Expect = 5.7
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 460 GGGXXXXXGXXGGGXAXPXPPPP 528
GG G GGG + P PPPP
Sbjct: 20 GGAASEASGVAGGGSSPPHPPPP 42
>04_03_0660 +
18463011-18463322,18463424-18463516,18464500-18464607,
18464892-18465044,18465256-18465354,18465443-18465571,
18465987-18466166,18466208-18466246,18466247-18466363,
18466445-18466609
Length = 464
Score = 29.1 bits (62), Expect = 5.7
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -1
Query: 500 PPPXHPXXXFXPPPXXKKKXGGGG 429
PPP P PPP + GGGG
Sbjct: 54 PPPPPPTQPAPPPPPPARSGGGGG 77
>02_02_0307 -
8809724-8811589,8811681-8811762,8812130-8812242,
8812361-8812492,8812681-8812864,8813002-8813135,
8813552-8813656,8813738-8813839,8813930-8814022,
8814136-8814456,8814595-8814696,8814791-8814853,
8815213-8815708,8815964-8816124,8816213-8816743,
8817077-8817118,8817203-8817334,8817639-8817703,
8817858-8818169,8818262-8818334,8818425-8818517,
8819440-8819501,8819740-8819809
Length = 1777
Score = 28.7 bits (61), Expect = 7.6
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -2
Query: 835 PXXPPXPPPGXGXAXXXMXKKXNXPPGGXGXXXXGGXXG 719
P P PPP A K P GG G GG G
Sbjct: 138 PSSPDAPPPPPPPASPDAAKTPGSPAGGGGGVGAGGGGG 176
>01_07_0188 -
41866689-41866763,41866889-41867155,41867277-41867722,
41867945-41868033,41868279-41868368,41868661-41868739,
41868979-41869042,41869597-41869684,41869776-41869836,
41869906-41869969,41870134-41870188,41870275-41870346,
41870469-41870551,41870629-41870724,41871279-41871383,
41872159-41872227,41872470-41872561,41872667-41872886
Length = 704
Score = 28.7 bits (61), Expect = 7.6
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 646 PPPXXXPPXXXGGGXGXXXGGXXXPPXPP 732
PPP PP GG G PP PP
Sbjct: 12 PPPPQHPPPPQAGGGGGGEFYRGPPPQPP 40
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.312 0.151 0.535
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,195,718
Number of Sequences: 37544
Number of extensions: 605511
Number of successful extensions: 2283
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1031
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2014
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2893540780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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