Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_F18
(989 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.24
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 33 0.42
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 33 0.42
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 0.92
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 0.92
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.2
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 30 2.9
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 30 2.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.9
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 29 3.9
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 29 3.9
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 3.9
Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical pr... 29 5.1
AF068713-16|AAD34663.1| 156|Caenorhabditis elegans Ground-like ... 29 5.1
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 29 5.1
AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (... 29 6.8
AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical... 29 6.8
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 8.9
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 28 8.9
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 28 8.9
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 33.5 bits (73), Expect = 0.24
Identities = 34/129 (26%), Positives = 34/129 (26%)
Frame = -3
Query: 756 GGXGXGXXGGXXGXXXTPXXXPXPPPXXXGGXXXXGGXXXFFFFFXFXGXAPXXXGGGEX 577
GG G G G G P PPP GG GG G GGG
Sbjct: 34 GGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGG---------CGGGGGGCGGGGG 84
Query: 576 APPQKXLXXXXXXXXXXGGGXGVXXXPPXXPXXXXXXPPXXKKKXGGGXXXXXXPXKKKX 397
GGG G PP P GGG
Sbjct: 85 CGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGG 144
Query: 396 GGGGXPXGG 370
GGGG GG
Sbjct: 145 GGGGCGGGG 153
Score = 30.7 bits (66), Expect(2) = 0.26
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 460 GGGXXXXXGXXGGGXAXPXPPPPXXXG 540
GGG G GGG A P PPP G
Sbjct: 38 GGGGCGGGGGCGGGCAPPPPPPACGGG 64
Score = 30.7 bits (66), Expect = 1.7
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 460 GGGXXXXXGXXGGGXAXPXPPPPXXXG 540
GGG G GGG A P PPP G
Sbjct: 95 GGGGCGGGGGCGGGCAPPPPPPACGGG 121
Score = 21.4 bits (43), Expect(2) = 0.26
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +1
Query: 646 PPPXXXPPXXXGGGXGXXXGG 708
PPP GGG G GG
Sbjct: 56 PPPPACGGGCGGGGGGCGGGG 76
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 32.7 bits (71), Expect = 0.42
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +1
Query: 460 GGGXXXXXGXXGGGXAXPXPPPP 528
GGG G GGG A P PPPP
Sbjct: 24 GGGGGYSGGGGGGGDAAPPPPPP 46
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 32.7 bits (71), Expect = 0.42
Identities = 22/81 (27%), Positives = 25/81 (30%), Gaps = 3/81 (3%)
Frame = -1
Query: 611 GXPPXXXGXEKXXXP---KXXXXXXXXPSXXGGGGXGXAXPPPXHPXXXFXPPPXXKKKX 441
G PP K P + P G G + PPP PPP +
Sbjct: 731 GIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGG 790
Query: 440 GGGGXXXXXPXKKXXGGGGXP 378
GG P GGGG P
Sbjct: 791 RGGHGGPPPPHFDRRGGGGPP 811
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 27.9 bits (59), Expect(2) = 0.92
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 646 PPPXXXPPXXXGGGXGXXXGGXXXPPXPP 732
PPP GGG G GG PP P
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGGCAPPPAP 78
Score = 27.1 bits (57), Expect(2) = 2.6
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 433 PPPXFFFXXGGGXXXXXGXXGGGXAXPXPPPPXXXG 540
PPP GGG G GGG PP P G
Sbjct: 50 PPPA---PCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
Score = 22.2 bits (45), Expect(2) = 0.92
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = +1
Query: 460 GGGXXXXXGXXGGGXAXPXPPPPXXXG 540
GG G GGG PP P G
Sbjct: 32 GGCGGGCGGGCGGGGGCAPPPAPCGGG 58
Score = 21.4 bits (43), Expect(2) = 2.6
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +1
Query: 646 PPPXXXPPXXXGGGXGXXXGG 708
PPP GGG G GG
Sbjct: 74 PPPAPCGGGCGGGGGGCGGGG 94
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 27.9 bits (59), Expect(2) = 0.92
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 646 PPPXXXPPXXXGGGXGXXXGGXXXPPXPP 732
PPP GGG G GG PP P
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGGCAPPPAP 78
Score = 27.1 bits (57), Expect(2) = 2.6
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 433 PPPXFFFXXGGGXXXXXGXXGGGXAXPXPPPPXXXG 540
PPP GGG G GGG PP P G
Sbjct: 50 PPPA---PCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
Score = 22.2 bits (45), Expect(2) = 0.92
Identities = 10/27 (37%), Positives = 10/27 (37%)
Frame = +1
Query: 460 GGGXXXXXGXXGGGXAXPXPPPPXXXG 540
GG G GGG PP P G
Sbjct: 32 GGCGGGCGGGCGGGGGCAPPPAPCGGG 58
Score = 21.4 bits (43), Expect(2) = 2.6
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +1
Query: 646 PPPXXXPPXXXGGGXGXXXGG 708
PPP GGG G GG
Sbjct: 74 PPPAPCGGGCGGGGGGCGGGG 94
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/67 (28%), Positives = 19/67 (28%)
Frame = -1
Query: 848 PXXGPXXTPXPPPRGXGGXXXDVEKXQXXPRGXXXXXXXGGXGGXKXPPXXXPXPPPXXX 669
P P PPP GG P GG PP P PPP
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Query: 668 GGXXXGG 648
G GG
Sbjct: 777 PGGFKGG 783
Score = 29.1 bits (62), Expect = 5.1
Identities = 23/67 (34%), Positives = 23/67 (34%), Gaps = 3/67 (4%)
Frame = +2
Query: 572 GAXSPPPXXXGAXPXKXKKKKKXXXPPXXXXPPXXXGGGXGXSXGVXXXPXXP---PXXP 742
G PPP G P PP PP GG S G P P P P
Sbjct: 724 GGPPPPPPPGGLPPITG-------GPP----PPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 743 XPXPPGG 763
P PPGG
Sbjct: 773 PPPPPGG 779
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 430 PPPPXFFFXXGGGXXXXXGXXGGGXAXPXPPPP 528
PPPP GG GG P PPPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/67 (28%), Positives = 19/67 (28%)
Frame = -1
Query: 848 PXXGPXXTPXPPPRGXGGXXXDVEKXQXXPRGXXXXXXXGGXGGXKXPPXXXPXPPPXXX 669
P P PPP GG P GG PP P PPP
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Query: 668 GGXXXGG 648
G GG
Sbjct: 777 PGGFKGG 783
Score = 29.1 bits (62), Expect = 5.1
Identities = 23/67 (34%), Positives = 23/67 (34%), Gaps = 3/67 (4%)
Frame = +2
Query: 572 GAXSPPPXXXGAXPXKXKKKKKXXXPPXXXXPPXXXGGGXGXSXGVXXXPXXP---PXXP 742
G PPP G P PP PP GG S G P P P P
Sbjct: 724 GGPPPPPPPGGLPPITG-------GPP----PPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 743 XPXPPGG 763
P PPGG
Sbjct: 773 PPPPPGG 779
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 430 PPPPXFFFXXGGGXXXXXGXXGGGXAXPXPPPP 528
PPPP GG GG P PPPP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/67 (28%), Positives = 19/67 (28%)
Frame = -1
Query: 848 PXXGPXXTPXPPPRGXGGXXXDVEKXQXXPRGXXXXXXXGGXGGXKXPPXXXPXPPPXXX 669
P P PPP GG P GG PP P PPP
Sbjct: 300 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Query: 668 GGXXXGG 648
G GG
Sbjct: 360 PGGFKGG 366
Score = 29.1 bits (62), Expect = 5.1
Identities = 23/67 (34%), Positives = 23/67 (34%), Gaps = 3/67 (4%)
Frame = +2
Query: 572 GAXSPPPXXXGAXPXKXKKKKKXXXPPXXXXPPXXXGGGXGXSXGVXXXPXXP---PXXP 742
G PPP G P PP PP GG S G P P P P
Sbjct: 307 GGPPPPPPPGGLPPITG-------GPP----PPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Query: 743 XPXPPGG 763
P PPGG
Sbjct: 356 PPPPPGG 362
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 430 PPPPXFFFXXGGGXXXXXGXXGGGXAXPXPPPP 528
PPPP GG GG P PPPP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 664 PPXXXGGGXGXXXGGXXXPPXPPXXSXXXXPR 759
PP GGG G G PP PP PR
Sbjct: 627 PPRGPGGGGGGGPTGPPAPPKPPAKPRGRPPR 658
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 29.9 bits (64), Expect = 2.9
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 664 PPXXXGGGXGXXXGGXXXPPXPPXXSXXXXPR 759
PP GGG G G PP PP PR
Sbjct: 627 PPRGPGGGGGGGPTGPPAPPKPPAKPRGRPPR 658
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/64 (29%), Positives = 21/64 (32%)
Frame = +2
Query: 572 GAXSPPPXXXGAXPXKXKKKKKXXXPPXXXXPPXXXGGGXGXSXGVXXXPXXPPXXPXPX 751
G+ SPPP P + PP PP GG P PP P
Sbjct: 251 GSGSPPPPPAAGSPPPPRTGS--PPPPPTGSPPPPPAGGSPPPPRAGSPP--PPPPPRGS 306
Query: 752 PPGG 763
PP G
Sbjct: 307 PPTG 310
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/64 (29%), Positives = 21/64 (32%)
Frame = +2
Query: 572 GAXSPPPXXXGAXPXKXKKKKKXXXPPXXXXPPXXXGGGXGXSXGVXXXPXXPPXXPXPX 751
G+ SPPP P + PP PP GG P PP P
Sbjct: 272 GSGSPPPPPAAGSPPPPRTGS--PPPPPTGSPPPPPAGGSPPPPRAGSPP--PPPPPRGS 327
Query: 752 PPGG 763
PP G
Sbjct: 328 PPTG 331
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 2.9
Identities = 19/64 (29%), Positives = 21/64 (32%)
Frame = +2
Query: 572 GAXSPPPXXXGAXPXKXKKKKKXXXPPXXXXPPXXXGGGXGXSXGVXXXPXXPPXXPXPX 751
G+ SPPP P + PP PP GG P PP P
Sbjct: 257 GSGSPPPPPAAGSPPPPRTGS--PPPPPTGSPPPPPAGGSPPPPRAGSPP--PPPPPRGS 312
Query: 752 PPGG 763
PP G
Sbjct: 313 PPTG 316
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -1
Query: 524 GGGXGXAXPPPXHPXXXFXPPPXXKKKXG 438
GG G PPP P PPP +K G
Sbjct: 1079 GGSNGGRSPPPEMPLLSAIPPPGARKPLG 1107
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 29.5 bits (63), Expect = 3.9
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = -1
Query: 524 GGGXGXAXPPPXHPXXXFXPPPXXKKKXG 438
GG G PPP P PPP +K G
Sbjct: 1091 GGSNGGRSPPPEMPLLSAIPPPGARKPLG 1119
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 29.5 bits (63), Expect = 3.9
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -3
Query: 756 GGXGXGXXGGXXGXXXTPXXXPXPPPXXXGG 664
GG G G GG G P PPP GG
Sbjct: 191 GGGGMGGGGGSGGSGGGSGRFPPPPPPYGGG 221
>Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical
protein T07C4.9b protein.
Length = 455
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = -1
Query: 521 GGXGXAXPPPXHPXXXFXP--PPXXKKKXGGGGXXXXXPXKKXXGGGGXPG 375
GG G P + + P P + GGGG GGGG PG
Sbjct: 15 GGYGQPPQQPGYGNGSYDPYGQPQQQPYPGGGGQPPYPGSNSNQGGGGYPG 65
>Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical
protein T07C4.9a protein.
Length = 497
Score = 29.1 bits (62), Expect = 5.1
Identities = 16/51 (31%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = -1
Query: 521 GGXGXAXPPPXHPXXXFXP--PPXXKKKXGGGGXXXXXPXKKXXGGGGXPG 375
GG G P + + P P + GGGG GGGG PG
Sbjct: 57 GGYGQPPQQPGYGNGSYDPYGQPQQQPYPGGGGQPPYPGSNSNQGGGGYPG 107
>AF068713-16|AAD34663.1| 156|Caenorhabditis elegans Ground-like
(grd related) protein31 protein.
Length = 156
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 460 GGGXXXXXGXXGGGXAXPXPPPPXXXG 540
GGG G GGG PPPP G
Sbjct: 30 GGGCGGCGGGCGGGCGCAPPPPPCCGG 56
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 29.1 bits (62), Expect = 5.1
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = -1
Query: 527 GGGGXGXAXPPPXHPXXXFXPPPXXKKKXGGGGXXXXXPXKKXXGGGGXPGGE 369
GGGG G A PP PPP GGGG P GG G+
Sbjct: 23 GGGGCGCAPPP---------PPPACGCGGGGGGYAAPPPAYAAPAGGYAVAGK 66
>AF038615-6|AAB94146.1| 157|Caenorhabditis elegans Ground-like (grd
related) protein19 protein.
Length = 157
Score = 28.7 bits (61), Expect = 6.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 460 GGGXXXXXGXXGGGXAXPXPPPPXXXG 540
G G G GGG P PPPP G
Sbjct: 28 GCGCGCGGGGGGGGCCAPPPPPPVCGG 54
>AC024790-13|AAL32247.1| 311|Caenorhabditis elegans Hypothetical
protein Y47D7A.13 protein.
Length = 311
Score = 28.7 bits (61), Expect = 6.8
Identities = 20/55 (36%), Positives = 20/55 (36%), Gaps = 3/55 (5%)
Frame = -1
Query: 527 GGGGXGXAXPPPXHPXXXFXPPPXXKKKXGG---GGXXXXXPXKKXXGGGGXPGG 372
GGGG G PPP PPP GG G P GG PGG
Sbjct: 22 GGGGGGCCAPPP--------PPPCGGGCGGGAPAAGGYAVAPQAPIGGGYAQPGG 68
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.3 bits (60), Expect = 8.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 371 PPXGXPPPPXFFFXGKXXXXXPP 439
PP PPPP F F GK P
Sbjct: 577 PPPPPPPPPSFMFNGKVPNAFSP 599
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2
Query: 386 PPPPXFFFXGKXXXXXPPP 442
PPPP +FF G PPP
Sbjct: 24 PPPPDWFFPGPLRPWGPPP 42
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 28.3 bits (60), Expect = 8.9
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 1/56 (1%)
Frame = -1
Query: 539 PSXXGGGGX-GXAXPPPXHPXXXFXPPPXXKKKXGGGGXXXXXPXKKXXGGGGXPG 375
P G GG G PP P PPP G G + G G PG
Sbjct: 127 PGRPGAGGLPGNPGRPPAQPCHPITPPPCRPCPQGPPGAPGSPGPQGNAGAPGQPG 182
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.312 0.151 0.535
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,091,352
Number of Sequences: 27780
Number of extensions: 324699
Number of successful extensions: 1369
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2584172786
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
- SilkBase 1999-2023 -