Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_FL5_F08
         (861 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    25   2.2  
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    25   3.0  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    24   5.2  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            24   6.8  

>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -3

Query: 319 SPTGSSFPADSPKPVPL 269
           +PTGSS P  +P+P P+
Sbjct: 175 APTGSSSPQITPRPTPV 191


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 316 PTGSSFPADSPKPVP 272
           P G   P D+P+PVP
Sbjct: 56  PNGDELPEDAPEPVP 70


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 24.2 bits (50), Expect = 5.2
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 595 VPPQSNSPPGSVXEPD 548
           +PP SNS P S   PD
Sbjct: 868 MPPSSNSSPSSYPSPD 883


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 23.8 bits (49), Expect = 6.8
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = -3

Query: 391  DDRAKRSPTYATPLTSPYNARLESSPTGSSFPADSP 284
            DDR +      TP T P      + P  S+ PA  P
Sbjct: 1070 DDRLELIKPQVTPATPPALTTPPTEPISSATPAPGP 1105


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,358
Number of Sequences: 2352
Number of extensions: 13388
Number of successful extensions: 34
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91786122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)