Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_F06
(822 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC104911-1|AAI04912.1| 620|Homo sapiens GLIS family zinc finger... 33 1.6
BC101799-1|AAI01800.1| 620|Homo sapiens GLIS family zinc finger... 33 1.6
AL591720-1|CAH72026.1| 620|Homo sapiens GLIS family zinc finger... 33 1.6
AK093474-1|BAC04178.1| 368|Homo sapiens protein ( Homo sapiens ... 33 1.6
AK090634-1|BAC03494.1| 620|Homo sapiens protein ( Homo sapiens ... 33 1.6
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 3.8
U66799-1|AAD11962.1| 367|Homo sapiens NK homeobox protein protein. 31 3.8
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 3.8
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 3.8
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 3.8
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 3.8
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 3.8
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 3.8
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 3.8
BC104424-1|AAI04425.1| 129|Homo sapiens SLC26A1 protein protein. 31 5.0
>BC104911-1|AAI04912.1| 620|Homo sapiens GLIS family zinc finger 1
protein.
Length = 620
Score = 32.7 bits (71), Expect = 1.6
Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 6/72 (8%)
Frame = +3
Query: 555 GLHQPDHQIPEFHTPTTPDLNIHFHQSP---ERRTKXSSRPGLKPPLSSXAPS---AYLT 716
GL P H +P H P + H H SP T+ PGL P+ S L
Sbjct: 416 GLLPPAHDVPSRHHPLDATTSSHHHLSPLPMAESTRDGLGPGLLSPIVSPLKGLGPPPLP 475
Query: 717 PSSLGMAKXGSP 752
PSS + G P
Sbjct: 476 PSSQSHSPGGQP 487
>BC101799-1|AAI01800.1| 620|Homo sapiens GLIS family zinc finger 1
protein.
Length = 620
Score = 32.7 bits (71), Expect = 1.6
Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 6/72 (8%)
Frame = +3
Query: 555 GLHQPDHQIPEFHTPTTPDLNIHFHQSP---ERRTKXSSRPGLKPPLSSXAPS---AYLT 716
GL P H +P H P + H H SP T+ PGL P+ S L
Sbjct: 416 GLLPPAHDVPSRHHPLDATTSSHHHLSPLPMAESTRDGLGPGLLSPIVSPLKGLGPPPLP 475
Query: 717 PSSLGMAKXGSP 752
PSS + G P
Sbjct: 476 PSSQSHSPGGQP 487
>AL591720-1|CAH72026.1| 620|Homo sapiens GLIS family zinc finger 1
protein.
Length = 620
Score = 32.7 bits (71), Expect = 1.6
Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 6/72 (8%)
Frame = +3
Query: 555 GLHQPDHQIPEFHTPTTPDLNIHFHQSP---ERRTKXSSRPGLKPPLSSXAPS---AYLT 716
GL P H +P H P + H H SP T+ PGL P+ S L
Sbjct: 416 GLLPPAHDVPSRHHPLDATTSSHHHLSPLPMAESTRDGLGPGLLSPIVSPLKGLGPPPLP 475
Query: 717 PSSLGMAKXGSP 752
PSS + G P
Sbjct: 476 PSSQSHSPGGQP 487
>AK093474-1|BAC04178.1| 368|Homo sapiens protein ( Homo sapiens
cDNA FLJ36155 fis, clone TESTI2025499, moderately
similar to ZINC FINGER PROTEIN GLI3. ).
Length = 368
Score = 32.7 bits (71), Expect = 1.6
Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 6/72 (8%)
Frame = +3
Query: 555 GLHQPDHQIPEFHTPTTPDLNIHFHQSP---ERRTKXSSRPGLKPPLSSXAPS---AYLT 716
GL P H +P H P + H H SP T+ PGL P+ S L
Sbjct: 164 GLLPPAHDVPSRHHPLDATTSSHHHLSPLPMAESTRDGLGPGLLSPIVSPLKGLGPPPLP 223
Query: 717 PSSLGMAKXGSP 752
PSS + G P
Sbjct: 224 PSSQSHSPGGQP 235
>AK090634-1|BAC03494.1| 620|Homo sapiens protein ( Homo sapiens
cDNA FLJ33315 fis, clone BNGH42007037, moderately
similar to ZINC FINGER PROTEIN GLI1 (GLI). ).
Length = 620
Score = 32.7 bits (71), Expect = 1.6
Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 6/72 (8%)
Frame = +3
Query: 555 GLHQPDHQIPEFHTPTTPDLNIHFHQSP---ERRTKXSSRPGLKPPLSSXAPS---AYLT 716
GL P H +P H P + H H SP T+ PGL P+ S L
Sbjct: 416 GLLPPAHDVPSRHHPLDATTSSHHHLSPLPMAESTRDGLGPGLLSPIVSPLKGLGPPPLP 475
Query: 717 PSSLGMAKXGSP 752
PSS + G P
Sbjct: 476 PSSQSHSPGGQP 487
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>U66799-1|AAD11962.1| 367|Homo sapiens NK homeobox protein protein.
Length = 367
Score = 31.5 bits (68), Expect = 3.8
Identities = 18/62 (29%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = +3
Query: 573 HQIPEFHTPTTPDLNIHFHQSPERRTKXSSRPGL-KPPLSSXAPSAYLTPSSLGMAKXGS 749
H + E TP P P + SS PPL + P P++ G++ GS
Sbjct: 26 HSMAEMKTPLYPAAYPPLPAGPPSSSSSSSSSSSPSPPLGTHNPGGLKPPATGGLSSLGS 85
Query: 750 PP 755
PP
Sbjct: 86 PP 87
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +3
Query: 255 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 416
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>BC104424-1|AAI04425.1| 129|Homo sapiens SLC26A1 protein protein.
Length = 129
Score = 31.1 bits (67), Expect = 5.0
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 492 SSRITIGGLALMHQATLPCDLGLHQPDHQIPEFHTPTTPDL 614
SSR + L +++L C +GLH+P +P H P DL
Sbjct: 88 SSRQAVSVLGARSRSSLFCRVGLHRPAVPVPAGHRPGRRDL 128
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,428,717
Number of Sequences: 237096
Number of extensions: 2458059
Number of successful extensions: 11618
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 11235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11610
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10259383312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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