Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_E24
(824 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 54 2e-09
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 54 2e-09
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 54 2e-09
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 52 5e-09
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 52 6e-09
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 52 6e-09
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 52 9e-09
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 51 1e-08
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 51 1e-08
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 51 1e-08
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 51 1e-08
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 50 3e-08
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 49 5e-08
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 49 5e-08
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 49 5e-08
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 48 8e-08
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 47 2e-07
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 47 2e-07
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 46 3e-07
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 43 4e-06
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 42 7e-06
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 36 5e-04
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 25 1.1
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 3.4
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 7.9
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 22 7.9
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 54.0 bits (124), Expect = 2e-09
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 6/123 (4%)
Frame = +1
Query: 196 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWR 369
K+ VN L ++ N+ E ++ L+ W D +L W+ ++G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 370 PDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPXAMQXDNWPNDMXTCTC 537
PD+VL N A G+Y +R + + NG V W+ + + +P D TC
Sbjct: 111 PDIVLFNNAD---GNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIM 167
Query: 538 KFG 546
KFG
Sbjct: 168 KFG 170
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 54.0 bits (124), Expect = 2e-09
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 3/120 (2%)
Frame = +1
Query: 196 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 369
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 370 PDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPXAMQXDNWPNDMXTCTCKFG 546
PD+VL NA A +A + + G V W + + + +P D TC KFG
Sbjct: 113 PDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFG 172
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 54.0 bits (124), Expect = 2e-09
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 2/92 (2%)
Frame = +1
Query: 277 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGS 450
++ +W D +L W+ E+G L V S+ +WRPD+VL NA A +A ++ G
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGR 136
Query: 451 VSWIKRLDISTPXAMQXDNWPNDMXTCTCKFG 546
V W + + + +P D TC KFG
Sbjct: 137 VEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFG 168
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 52.4 bits (120), Expect = 5e-09
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Frame = +1
Query: 199 IVVNLTLHLRHA---NIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLW 366
+VV L L L N+++ T + L+ W D + W+ E+G T L V SE +W
Sbjct: 46 VVVKLGLRLSQLIDLNLKDQILTTNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIW 103
Query: 367 RPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPXAMQXDNWPNDMXTCTCKF 543
PD+VL N A G + +A + G V W + + +P D TC KF
Sbjct: 104 LPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKF 163
Query: 544 G 546
G
Sbjct: 164 G 164
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 52.0 bits (119), Expect = 6e-09
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Frame = +1
Query: 235 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 408
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 409 GDYALRARVSNNGSVSWIKRLDISTPXAMQXDNWPNDMXTCTCKFG 546
G Y V++NGS ++ + + +P D C KFG
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFG 198
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 52.0 bits (119), Expect = 6e-09
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Frame = +1
Query: 235 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 408
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 152
Query: 409 GDYALRARVSNNGSVSWIKRLDISTPXAMQXDNWPNDMXTCTCKFG 546
G Y V++NGS ++ + + +P D C KFG
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFG 198
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 51.6 bits (118), Expect = 9e-09
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Frame = +1
Query: 235 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 408
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 409 GDYALRARVSNNGSVSWIKRLDISTPXAMQXDNWPNDMXTCTCKFG 546
G Y V++NGS ++ + + +P D C KFG
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFG 130
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 51.2 bits (117), Expect = 1e-08
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Frame = +1
Query: 277 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL----RARVSN 441
++ W D +L WN E+G L V SE +W PD+VL N A G+Y + +A +
Sbjct: 86 VEQRWNDYKLKWNPEEYGGVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKY 142
Query: 442 NGSVSWIKRLDISTPXAMQXDNWPNDMXTCTCKFG 546
G VSW + + + +P D +C KFG
Sbjct: 143 TGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFG 177
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 50.8 bits (116), Expect = 1e-08
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Frame = +1
Query: 235 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 408
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 409 GDYALRARVSNNGSVSWIKRLDISTPXAMQXDNWPNDMXTCTCKFG 546
G Y V+++GS ++ + M +P D C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFG 130
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 50.8 bits (116), Expect = 1e-08
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Frame = +1
Query: 235 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 408
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 409 GDYALRARVSNNGSVSWIKRLDISTPXAMQXDNWPNDMXTCTCKFG 546
G Y V+++GS ++ + M +P D C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFG 130
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 50.8 bits (116), Expect = 1e-08
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 6/123 (4%)
Frame = +1
Query: 196 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWR 369
++ + L L L N++ T + ++ +W D +L W E+G L V S+ +WR
Sbjct: 55 RVCIKLKLSQLIDVNLKNQIMTTNLW--VEQSWYDYKLRWEPKEYGGVKMLHVPSDHIWR 112
Query: 370 PDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPXAMQXDNWPNDMXTCTC 537
PD+VL N A G+Y + +A V +G V W + ++ + +P D+ TC
Sbjct: 113 PDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVL 169
Query: 538 KFG 546
K G
Sbjct: 170 KLG 172
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 49.6 bits (113), Expect = 3e-08
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Frame = +1
Query: 235 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 408
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 409 GDYALRARVSNNGSVSWIKRLDISTPXAMQXDNWPNDMXTCTCKFG 546
G Y V+++GS ++ + + +P D C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFG 130
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 49.2 bits (112), Expect = 5e-08
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Frame = +1
Query: 235 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 408
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 409 GDYALRARVSNNGSVSWIKRLDISTPXAMQXDNWPNDMXTCTCKFG 546
G Y V+++GS ++ + + +P D C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFG 130
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 49.2 bits (112), Expect = 5e-08
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 2/106 (1%)
Frame = +1
Query: 235 NIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLNAA-ATTA 408
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N+A
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYNSADEGFD 84
Query: 409 GDYALRARVSNNGSVSWIKRLDISTPXAMQXDNWPNDMXTCTCKFG 546
G Y V+++GS ++ + + +P D C KFG
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFG 130
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 49.2 bits (112), Expect = 5e-08
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 6/133 (4%)
Frame = +1
Query: 166 RTIGSLPPYSKIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNAGEWG-CST 339
R +G+ + + L L L N++ T + ++ W D +L WN ++G T
Sbjct: 37 RPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVW--VEQEWNDYKLKWNPDDYGGVDT 94
Query: 340 WLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPXAMQXDN 507
V SE +W PD+VL N A G+Y + +A + + G V W + + +
Sbjct: 95 LHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEY 151
Query: 508 WPNDMXTCTCKFG 546
+P D TC KFG
Sbjct: 152 FPFDEQTCFMKFG 164
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 48.4 bits (110), Expect = 8e-08
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Frame = +1
Query: 277 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGS 450
L++ W D + WN ++G L + RLW+PDV++ N+A G Y V NNG+
Sbjct: 76 LKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGT 135
Query: 451 VSWIKRLDISTPXAMQXDNWPNDMXTCTCKFG 546
++ + + +P D C KFG
Sbjct: 136 CLYVPPGIFKSTCKIDITWFPFDDQRCEMKFG 167
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 47.2 bits (107), Expect = 2e-07
Identities = 31/118 (26%), Positives = 48/118 (40%), Gaps = 3/118 (2%)
Frame = +1
Query: 199 IVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 375
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 376 VVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPXAMQXDNWPNDMXTCTCKF 543
+L N A + VS+ G V W+ + + + +P D C K+
Sbjct: 92 TILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKW 149
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 46.8 bits (106), Expect = 2e-07
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 3/106 (2%)
Frame = +1
Query: 238 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAAT---TA 408
I E + T + + +W+D+RL++ G+ + + R+W+PD N + T
Sbjct: 44 ISEVDMTYSMDCYFRQSWVDRRLAFQGGKETLALSISMLARIWKPDTYFYNGKHSYLHTI 103
Query: 409 GDYALRARVSNNGSVSWIKRLDISTPXAMQXDNWPNDMXTCTCKFG 546
R+ +G V + RL I M +N+P D C +FG
Sbjct: 104 TSPNKFVRLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFG 149
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 46.4 bits (105), Expect = 3e-07
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 6/123 (4%)
Frame = +1
Query: 196 KIVVNLTLHL--RHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLW 366
+I N+T+ L + + S + + + + + W D LSW ++ G + V S+ +W
Sbjct: 66 QIANNVTMQLLPKLMEFDDWTSVMELHSWMTLMWTDSHLSWKPSDFDGINYIYVKSDDIW 125
Query: 367 RPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPXAMQXDNWPNDMXTCTC 537
PD+ + N+ T G V ++GSVS + + A +WP D C
Sbjct: 126 VPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRI 185
Query: 538 KFG 546
FG
Sbjct: 186 NFG 188
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 42.7 bits (96), Expect = 4e-06
Identities = 25/113 (22%), Positives = 50/113 (44%), Gaps = 3/113 (2%)
Frame = +1
Query: 205 VNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVV 381
++ L ++H N+ E TV L++ W L+W + E+ ++ V S +W PD+V
Sbjct: 62 IDFGLSIQHYNVDEYSHTVDFHVMLKLMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIV 121
Query: 382 L--LNAAATTAGDYALRARVSNNGSVSWIKRLDISTPXAMQXDNWPNDMXTCT 534
+ + + ++ V N+G++ + + WP D+ CT
Sbjct: 122 MHSVTSVGIDLEMPSVECIVFNSGTILCVPFTTYTPVCEYDHTWWPYDILNCT 174
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 41.9 bits (94), Expect = 7e-06
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Frame = +1
Query: 280 QMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDYAL---RARVSNNGS 450
+ +W D RLS+ S + ER+WRPD N + + R+S +G
Sbjct: 90 RQSWRDSRLSFLGPIKSLSLSIKMLERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGD 149
Query: 451 VSWIKRLDISTPXAMQXDNWPNDMXTCTCKFG 546
+ + RL I M+ N+P D +C G
Sbjct: 150 ILYSMRLTIKAKCPMELRNFPMDRQSCPLILG 181
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 35.9 bits (79), Expect = 5e-04
Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
Frame = +1
Query: 238 IRESESTVRILADLQMNWIDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLNAAATTAGDY 417
I E I L W D+RL+++ E + +E++W PD N + D
Sbjct: 75 ISEVNMDYTITMYLNQYWKDERLAFSQEEEVLTLSGDFAEKIWVPDTFFANDKNSFLHDV 134
Query: 418 ALR---ARVSNNGSVSWIKRLDISTPXAMQXDNWPNDMXTCT 534
R R+S +GSV++ R + M +P D CT
Sbjct: 135 TERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCT 176
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 24.6 bits (51), Expect = 1.1
Identities = 26/122 (21%), Positives = 51/122 (41%), Gaps = 11/122 (9%)
Frame = +1
Query: 199 IVVNLTLHLRHAN-IRESESTVRILADLQMNWIDKRLS-----WNAGEWGCSTWLVSSER 360
++V+ + + N I + R+ ++ +WI+ RL + G+ + +
Sbjct: 11 VLVDFNIFVADINSINVEDMDFRVDMFVRQSWIESRLDMPDYIFEEGDDYVTLPPEFFDS 70
Query: 361 LWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPXAMQXDNWPNDMX 525
LW+PD LNA + AL + S+ N +V + R+ M+ +P D+
Sbjct: 71 LWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMDIQ 128
Query: 526 TC 531
C
Sbjct: 129 IC 130
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 23.0 bits (47), Expect = 3.4
Identities = 13/62 (20%), Positives = 27/62 (43%), Gaps = 3/62 (4%)
Frame = +1
Query: 355 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPXAMQXDNWPNDMX 525
+ +WRPD NA + T + + + ++ ++ +L + AM +P+D
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 526 TC 531
C
Sbjct: 176 EC 177
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 7.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -3
Query: 342 PSAAAPFPCVPTQS 301
PSA AP P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.8 bits (44), Expect = 7.9
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -1
Query: 140 GQ*CCVFAFCRTSYSTSEEKPVTR 69
G+ CC F T Y + K VT+
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQ 625
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 232,835
Number of Sequences: 438
Number of extensions: 5623
Number of successful extensions: 73
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26338809
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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