Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_FL5_E20
         (837 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M86917-1|AAA59973.1|  807|Homo sapiens oxysterol-binding protein...    32   3.0  
BC011581-1|AAH11581.1|  807|Homo sapiens oxysterol binding prote...    32   3.0  
AF185705-1|AAG28373.1|  807|Homo sapiens oxysterol binding prote...    32   3.0  
AF185696-1|AAG17011.1|  807|Homo sapiens oxysterol-binding prote...    32   3.0  
AB113647-1|BAD26751.1| 1475|Homo sapiens RGD, leucine-rich repea...    31   6.8  
Y08416-1|CAA69693.1|  498|Homo sapiens nicotinic acetylcholine r...    30   9.0  
X55019-1|CAA38759.1|  517|Homo sapiens acetylcholine receptor de...    30   9.0  
U62439-1|AAB40117.1|  498|Homo sapiens nicotinic acetylcholine r...    30   9.0  
U48861-1|AAA92123.1|  498|Homo sapiens beta 4 nicotinic acetylch...    30   9.0  
BC096083-1|AAH96083.1|  198|Homo sapiens CHRNB4 protein protein.       30   9.0  
BC096082-1|AAH96082.1|  498|Homo sapiens cholinergic receptor, n...    30   9.0  
BC096081-1|AAH96081.1|  198|Homo sapiens CHRNB4 protein protein.       30   9.0  
BC096080-1|AAH96080.1|  498|Homo sapiens cholinergic receptor, n...    30   9.0  
BC093925-1|AAH93925.1|  517|Homo sapiens cholinergic receptor, n...    30   9.0  
BC093923-1|AAH93923.1|  517|Homo sapiens cholinergic receptor, n...    30   9.0  
AJ306454-1|CAC34819.1|  497|Homo sapiens neuronal nicotinic acet...    30   9.0  
AF306329-1|AAL02062.1|  498|Homo sapiens neuronal nicotinic acet...    30   9.0  
AC092165-2|AAY24102.1|  517|Homo sapiens unknown protein.              30   9.0  

>M86917-1|AAA59973.1|  807|Homo sapiens oxysterol-binding protein
           protein.
          Length = 807

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 15/25 (60%), Positives = 15/25 (60%)
 Frame = +3

Query: 621 GXPGXGXGXXXAAGPXPXXPPEGGS 695
           G PG G G   AAGP P  PP GGS
Sbjct: 56  GGPGPGAGGVAAAGPAPA-PPTGGS 79


>BC011581-1|AAH11581.1|  807|Homo sapiens oxysterol binding protein
           protein.
          Length = 807

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 15/25 (60%), Positives = 15/25 (60%)
 Frame = +3

Query: 621 GXPGXGXGXXXAAGPXPXXPPEGGS 695
           G PG G G   AAGP P  PP GGS
Sbjct: 56  GGPGPGAGGVAAAGPAPA-PPTGGS 79


>AF185705-1|AAG28373.1|  807|Homo sapiens oxysterol binding protein
           1 protein.
          Length = 807

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 15/25 (60%), Positives = 15/25 (60%)
 Frame = +3

Query: 621 GXPGXGXGXXXAAGPXPXXPPEGGS 695
           G PG G G   AAGP P  PP GGS
Sbjct: 56  GGPGPGAGGVAAAGPAPA-PPTGGS 79


>AF185696-1|AAG17011.1|  807|Homo sapiens oxysterol-binding protein
           1 protein.
          Length = 807

 Score = 31.9 bits (69), Expect = 3.0
 Identities = 15/25 (60%), Positives = 15/25 (60%)
 Frame = +3

Query: 621 GXPGXGXGXXXAAGPXPXXPPEGGS 695
           G PG G G   AAGP P  PP GGS
Sbjct: 56  GGPGPGAGGVAAAGPAPA-PPTGGS 79


>AB113647-1|BAD26751.1| 1475|Homo sapiens RGD, leucine-rich repeat,
           tropomodulin and proline-rich containing protein
           protein.
          Length = 1475

 Score = 30.7 bits (66), Expect = 6.8
 Identities = 15/37 (40%), Positives = 17/37 (45%)
 Frame = +2

Query: 284 WIDKRLSWNAGRMGLQHLAGVLGTLVEA*RGTAKRGC 394
           W+  R  W AGR GL   AGV  +L         RGC
Sbjct: 432 WMTGRADWRAGRGGLGPPAGVANSLPPQLFAAVSRGC 468


>Y08416-1|CAA69693.1|  498|Homo sapiens nicotinic acetylcholine
           receptor beta4 subunit precursor protein.
          Length = 498

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
 Frame = +2

Query: 92  AIASAAECENATSLSLMIDSLL--ATYDRESPP--DSKIVVNLTLHLRHA---NIRESES 250
           A+     C  A +   ++D LL    Y+    P   S  ++++ L L  A   ++ E E 
Sbjct: 14  ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73

Query: 251 TVRILADLQMNWIDKRLSWNAGR 319
            +     L+  W D RL+WN+ R
Sbjct: 74  IMTTNVWLKQEWTDYRLTWNSSR 96


>X55019-1|CAA38759.1|  517|Homo sapiens acetylcholine receptor delta
           subunit protein.
          Length = 517

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
 Frame = +2

Query: 164 YDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGRMG 325
           Y++E  P    +  + V L L L +  +++E E T+     ++  W D RL WNA   G
Sbjct: 38  YNKELRPVAHKEESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96


>U62439-1|AAB40117.1|  498|Homo sapiens nicotinic acetylcholine
           receptor beta4 subunit precursor protein.
          Length = 498

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
 Frame = +2

Query: 92  AIASAAECENATSLSLMIDSLL--ATYDRESPP--DSKIVVNLTLHLRHA---NIRESES 250
           A+     C  A +   ++D LL    Y+    P   S  ++++ L L  A   ++ E E 
Sbjct: 14  ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73

Query: 251 TVRILADLQMNWIDKRLSWNAGR 319
            +     L+  W D RL+WN+ R
Sbjct: 74  IMTTNVWLKQEWTDYRLTWNSSR 96


>U48861-1|AAA92123.1|  498|Homo sapiens beta 4 nicotinic
           acetylcholine receptor subunit protein.
          Length = 498

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
 Frame = +2

Query: 92  AIASAAECENATSLSLMIDSLL--ATYDRESPP--DSKIVVNLTLHLRHA---NIRESES 250
           A+     C  A +   ++D LL    Y+    P   S  ++++ L L  A   ++ E E 
Sbjct: 14  ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73

Query: 251 TVRILADLQMNWIDKRLSWNAGR 319
            +     L+  W D RL+WN+ R
Sbjct: 74  IMTTNVWLKQEWTDYRLTWNSSR 96


>BC096083-1|AAH96083.1|  198|Homo sapiens CHRNB4 protein protein.
          Length = 198

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
 Frame = +2

Query: 92  AIASAAECENATSLSLMIDSLL--ATYDRESPP--DSKIVVNLTLHLRHA---NIRESES 250
           A+     C  A +   ++D LL    Y+    P   S  ++++ L L  A   ++ E E 
Sbjct: 14  ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73

Query: 251 TVRILADLQMNWIDKRLSWNAGR 319
            +     L+  W D RL+WN+ R
Sbjct: 74  IMTTNVWLKQEWTDYRLTWNSSR 96


>BC096082-1|AAH96082.1|  498|Homo sapiens cholinergic receptor,
           nicotinic, beta 4 protein.
          Length = 498

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
 Frame = +2

Query: 92  AIASAAECENATSLSLMIDSLL--ATYDRESPP--DSKIVVNLTLHLRHA---NIRESES 250
           A+     C  A +   ++D LL    Y+    P   S  ++++ L L  A   ++ E E 
Sbjct: 14  ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73

Query: 251 TVRILADLQMNWIDKRLSWNAGR 319
            +     L+  W D RL+WN+ R
Sbjct: 74  IMTTNVWLKQEWTDYRLTWNSSR 96


>BC096081-1|AAH96081.1|  198|Homo sapiens CHRNB4 protein protein.
          Length = 198

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
 Frame = +2

Query: 92  AIASAAECENATSLSLMIDSLL--ATYDRESPP--DSKIVVNLTLHLRHA---NIRESES 250
           A+     C  A +   ++D LL    Y+    P   S  ++++ L L  A   ++ E E 
Sbjct: 14  ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73

Query: 251 TVRILADLQMNWIDKRLSWNAGR 319
            +     L+  W D RL+WN+ R
Sbjct: 74  IMTTNVWLKQEWTDYRLTWNSSR 96


>BC096080-1|AAH96080.1|  498|Homo sapiens cholinergic receptor,
           nicotinic, beta 4 protein.
          Length = 498

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
 Frame = +2

Query: 92  AIASAAECENATSLSLMIDSLL--ATYDRESPP--DSKIVVNLTLHLRHA---NIRESES 250
           A+     C  A +   ++D LL    Y+    P   S  ++++ L L  A   ++ E E 
Sbjct: 14  ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73

Query: 251 TVRILADLQMNWIDKRLSWNAGR 319
            +     L+  W D RL+WN+ R
Sbjct: 74  IMTTNVWLKQEWTDYRLTWNSSR 96


>BC093925-1|AAH93925.1|  517|Homo sapiens cholinergic receptor,
           nicotinic, delta protein.
          Length = 517

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
 Frame = +2

Query: 164 YDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGRMG 325
           Y++E  P    +  + V L L L +  +++E E T+     ++  W D RL WNA   G
Sbjct: 38  YNKELRPVAHKEESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96


>BC093923-1|AAH93923.1|  517|Homo sapiens cholinergic receptor,
           nicotinic, delta protein.
          Length = 517

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
 Frame = +2

Query: 164 YDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGRMG 325
           Y++E  P    +  + V L L L +  +++E E T+     ++  W D RL WNA   G
Sbjct: 38  YNKELRPVAHKEESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96


>AJ306454-1|CAC34819.1|  497|Homo sapiens neuronal nicotinic
           acetylcholine receptor beta-4 subunit protein.
          Length = 497

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
 Frame = +2

Query: 92  AIASAAECENATSLSLMIDSLL--ATYDRESPP--DSKIVVNLTLHLRHA---NIRESES 250
           A+     C  A +   ++D LL    Y+    P   S  ++++ L L  A   ++ E E 
Sbjct: 14  ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73

Query: 251 TVRILADLQMNWIDKRLSWNAGR 319
            +     L+  W D RL+WN+ R
Sbjct: 74  IMTTNVWLKQEWTDYRLTWNSSR 96


>AF306329-1|AAL02062.1|  498|Homo sapiens neuronal nicotinic
           acetylcholine receptor beta 4 subunit protein.
          Length = 498

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 7/83 (8%)
 Frame = +2

Query: 92  AIASAAECENATSLSLMIDSLL--ATYDRESPP--DSKIVVNLTLHLRHA---NIRESES 250
           A+     C  A +   ++D LL    Y+    P   S  ++++ L L  A   ++ E E 
Sbjct: 14  ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73

Query: 251 TVRILADLQMNWIDKRLSWNAGR 319
            +     L+  W D RL+WN+ R
Sbjct: 74  IMTTNVWLKQEWTDYRLTWNSSR 96


>AC092165-2|AAY24102.1|  517|Homo sapiens unknown protein.
          Length = 517

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
 Frame = +2

Query: 164 YDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLSWNAGRMG 325
           Y++E  P    +  + V L L L +  +++E E T+     ++  W D RL WNA   G
Sbjct: 38  YNKELRPVAHKEESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFG 96


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,241,209
Number of Sequences: 237096
Number of extensions: 2164671
Number of successful extensions: 4986
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 4533
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4977
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10538170902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)