Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_E14
(929 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S57132-1|AAB25797.1| 1186|Homo sapiens type XVI collagen alpha 1... 34 0.85
M92642-1|AAA58427.1| 1603|Homo sapiens alpha-1 type XVI collagen... 34 0.85
AB209571-1|BAD92808.1| 1463|Homo sapiens alpha 1 type XVI collag... 34 0.85
Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine r... 33 1.1
U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine r... 33 1.1
U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic acetylch... 33 1.1
BC096083-1|AAH96083.1| 198|Homo sapiens CHRNB4 protein protein. 33 1.1
BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor, n... 33 1.1
BC096081-1|AAH96081.1| 198|Homo sapiens CHRNB4 protein protein. 33 1.1
BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor, n... 33 1.1
AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic acet... 33 1.1
AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic acet... 33 1.1
X55019-1|CAA38759.1| 517|Homo sapiens acetylcholine receptor de... 31 6.0
BC093925-1|AAH93925.1| 517|Homo sapiens cholinergic receptor, n... 31 6.0
BC093923-1|AAH93923.1| 517|Homo sapiens cholinergic receptor, n... 31 6.0
AC092165-2|AAY24102.1| 517|Homo sapiens unknown protein. 31 6.0
Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for ... 31 7.9
X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor pr... 31 7.9
S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine r... 31 7.9
BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein. 31 7.9
AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein. 31 7.9
>S57132-1|AAB25797.1| 1186|Homo sapiens type XVI collagen alpha 1
chain protein.
Length = 1186
Score = 33.9 bits (74), Expect = 0.85
Identities = 21/76 (27%), Positives = 26/76 (34%)
Frame = -3
Query: 513 LTXPXGFXRXAAXPVXXXPRGXXXEKFPPRGXAXPXXTXNXGXGLPQXFPXTPAQVLXPH 334
L P GF P P+G + PP P G PQ P P V P
Sbjct: 820 LMGPPGFKGKTGHPGLPGPKGDCGKPGPPGSTGRPGAEGEPGAMGPQGRPGPPGHVGPPG 879
Query: 333 SPCVPTQSFVDPIHLK 286
P P + + + LK
Sbjct: 880 PPGQPGPAGISAVGLK 895
>M92642-1|AAA58427.1| 1603|Homo sapiens alpha-1 type XVI collagen
protein.
Length = 1603
Score = 33.9 bits (74), Expect = 0.85
Identities = 21/76 (27%), Positives = 26/76 (34%)
Frame = -3
Query: 513 LTXPXGFXRXAAXPVXXXPRGXXXEKFPPRGXAXPXXTXNXGXGLPQXFPXTPAQVLXPH 334
L P GF P P+G + PP P G PQ P P V P
Sbjct: 1237 LMGPPGFKGKTGHPGLPGPKGDCGKPGPPGSTGRPGAEGEPGAMGPQGRPGPPGHVGPPG 1296
Query: 333 SPCVPTQSFVDPIHLK 286
P P + + + LK
Sbjct: 1297 PPGQPGPAGISAVGLK 1312
>AB209571-1|BAD92808.1| 1463|Homo sapiens alpha 1 type XVI collagen
precursor variant protein.
Length = 1463
Score = 33.9 bits (74), Expect = 0.85
Identities = 21/76 (27%), Positives = 26/76 (34%)
Frame = -3
Query: 513 LTXPXGFXRXAAXPVXXXPRGXXXEKFPPRGXAXPXXTXNXGXGLPQXFPXTPAQVLXPH 334
L P GF P P+G + PP P G PQ P P V P
Sbjct: 1097 LMGPPGFKGKTGHPGLPGPKGDCGKPGPPGSTGRPGAEGEPGAMGPQGRPGPPGHVGPPG 1156
Query: 333 SPCVPTQSFVDPIHLK 286
P P + + + LK
Sbjct: 1157 PPGQPGPAGISAVGLK 1172
>Y08416-1|CAA69693.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 33.5 bits (73), Expect = 1.1
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 7/98 (7%)
Frame = +1
Query: 106 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 264
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 265 TVRIQADLQMNWIDKRLSWNAGGVGXQHLGWXPRKXLW 378
+ L+ W D RL+WN+ ++ P K +W
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRYEGVNILRIPAKRIW 111
>U62439-1|AAB40117.1| 498|Homo sapiens nicotinic acetylcholine
receptor beta4 subunit precursor protein.
Length = 498
Score = 33.5 bits (73), Expect = 1.1
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 7/98 (7%)
Frame = +1
Query: 106 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 264
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 265 TVRIQADLQMNWIDKRLSWNAGGVGXQHLGWXPRKXLW 378
+ L+ W D RL+WN+ ++ P K +W
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRYEGVNILRIPAKRIW 111
>U48861-1|AAA92123.1| 498|Homo sapiens beta 4 nicotinic
acetylcholine receptor subunit protein.
Length = 498
Score = 33.5 bits (73), Expect = 1.1
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 7/98 (7%)
Frame = +1
Query: 106 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 264
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 265 TVRIQADLQMNWIDKRLSWNAGGVGXQHLGWXPRKXLW 378
+ L+ W D RL+WN+ ++ P K +W
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRYEGVNILRIPAKRIW 111
>BC096083-1|AAH96083.1| 198|Homo sapiens CHRNB4 protein protein.
Length = 198
Score = 33.5 bits (73), Expect = 1.1
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 7/98 (7%)
Frame = +1
Query: 106 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 264
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 265 TVRIQADLQMNWIDKRLSWNAGGVGXQHLGWXPRKXLW 378
+ L+ W D RL+WN+ ++ P K +W
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRYEGVNILRIPAKRIW 111
>BC096082-1|AAH96082.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 33.5 bits (73), Expect = 1.1
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 7/98 (7%)
Frame = +1
Query: 106 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 264
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 265 TVRIQADLQMNWIDKRLSWNAGGVGXQHLGWXPRKXLW 378
+ L+ W D RL+WN+ ++ P K +W
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRYEGVNILRIPAKRIW 111
>BC096081-1|AAH96081.1| 198|Homo sapiens CHRNB4 protein protein.
Length = 198
Score = 33.5 bits (73), Expect = 1.1
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 7/98 (7%)
Frame = +1
Query: 106 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 264
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 265 TVRIQADLQMNWIDKRLSWNAGGVGXQHLGWXPRKXLW 378
+ L+ W D RL+WN+ ++ P K +W
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRYEGVNILRIPAKRIW 111
>BC096080-1|AAH96080.1| 498|Homo sapiens cholinergic receptor,
nicotinic, beta 4 protein.
Length = 498
Score = 33.5 bits (73), Expect = 1.1
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 7/98 (7%)
Frame = +1
Query: 106 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 264
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 265 TVRIQADLQMNWIDKRLSWNAGGVGXQHLGWXPRKXLW 378
+ L+ W D RL+WN+ ++ P K +W
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRYEGVNILRIPAKRIW 111
>AJ306454-1|CAC34819.1| 497|Homo sapiens neuronal nicotinic
acetylcholine receptor beta-4 subunit protein.
Length = 497
Score = 33.5 bits (73), Expect = 1.1
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 7/98 (7%)
Frame = +1
Query: 106 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 264
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 265 TVRIQADLQMNWIDKRLSWNAGGVGXQHLGWXPRKXLW 378
+ L+ W D RL+WN+ ++ P K +W
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRYEGVNILRIPAKRIW 111
>AF306329-1|AAL02062.1| 498|Homo sapiens neuronal nicotinic
acetylcholine receptor beta 4 subunit protein.
Length = 498
Score = 33.5 bits (73), Expect = 1.1
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 7/98 (7%)
Frame = +1
Query: 106 AIASAAECENATSLSLMIDSLL--ATYD---RDSPPDSKIV-VNLTLHLRHA-NIRESES 264
A+ C A + ++D LL Y+ R + S+++ + L L L ++ E E
Sbjct: 14 ALCGRGNCRVANAEEKLMDDLLNKTRYNNLIRPATSSSQLISIKLQLSLAQLISVNEREQ 73
Query: 265 TVRIQADLQMNWIDKRLSWNAGGVGXQHLGWXPRKXLW 378
+ L+ W D RL+WN+ ++ P K +W
Sbjct: 74 IMTTNVWLKQEWTDYRLTWNSSRYEGVNILRIPAKRIW 111
>X55019-1|CAA38759.1| 517|Homo sapiens acetylcholine receptor delta
subunit protein.
Length = 517
Score = 31.1 bits (67), Expect = 6.0
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 199 DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGGVGXQHLGWXPRKXL 375
+ + V L L L + +++E E T+ ++ W D RL WNA G + P +
Sbjct: 49 EESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFGNISVLRLPPDMV 108
Query: 376 W 378
W
Sbjct: 109 W 109
>BC093925-1|AAH93925.1| 517|Homo sapiens cholinergic receptor,
nicotinic, delta protein.
Length = 517
Score = 31.1 bits (67), Expect = 6.0
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 199 DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGGVGXQHLGWXPRKXL 375
+ + V L L L + +++E E T+ ++ W D RL WNA G + P +
Sbjct: 49 EESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFGNISVLRLPPDMV 108
Query: 376 W 378
W
Sbjct: 109 W 109
>BC093923-1|AAH93923.1| 517|Homo sapiens cholinergic receptor,
nicotinic, delta protein.
Length = 517
Score = 31.1 bits (67), Expect = 6.0
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 199 DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGGVGXQHLGWXPRKXL 375
+ + V L L L + +++E E T+ ++ W D RL WNA G + P +
Sbjct: 49 EESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFGNISVLRLPPDMV 108
Query: 376 W 378
W
Sbjct: 109 W 109
>AC092165-2|AAY24102.1| 517|Homo sapiens unknown protein.
Length = 517
Score = 31.1 bits (67), Expect = 6.0
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 199 DSKIVVNLTLHLRHA-NIRESESTVRIQADLQMNWIDKRLSWNAGGVGXQHLGWXPRKXL 375
+ + V L L L + +++E E T+ ++ W D RL WNA G + P +
Sbjct: 49 EESVDVALALTLSNLISLKEVEETLTTNVWIEHGWTDNRLKWNAEEFGNISVLRLPPDMV 108
Query: 376 W 378
W
Sbjct: 109 W 109
>Y00762-1|CAA68731.1| 457|Homo sapiens protein ( Human mRNA for
muscle acetylcholine receptor alpha-subunit. ).
Length = 457
Score = 30.7 bits (66), Expect = 7.9
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +1
Query: 205 KIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVGXQHLGWXPRKXLWK 381
++ V L L ++ N+ E V L+ W+D L WN G P + +W+
Sbjct: 50 EVTVGLQL-IQLINVDEVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWR 107
>X02502-1|CAA26344.1| 457|Homo sapiens acetylcholine receptor
protein.
Length = 457
Score = 30.7 bits (66), Expect = 7.9
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +1
Query: 205 KIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVGXQHLGWXPRKXLWK 381
++ V L L ++ N+ E V L+ W+D L WN G P + +W+
Sbjct: 50 EVTVGLQL-IQLINVDEVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWR 107
>S77094-1|AAD14247.1| 457|Homo sapiens nicotinic acetylcholine
receptor alpha subunit|AChR protein.
Length = 457
Score = 30.7 bits (66), Expect = 7.9
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +1
Query: 205 KIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVGXQHLGWXPRKXLWK 381
++ V L L ++ N+ E V L+ W+D L WN G P + +W+
Sbjct: 50 EVTVGLQL-IQLINVDEVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWR 107
>BC006314-1|AAH06314.1| 269|Homo sapiens CHRNA1 protein protein.
Length = 269
Score = 30.7 bits (66), Expect = 7.9
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +1
Query: 205 KIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVGXQHLGWXPRKXLWK 381
++ V L L ++ N+ E V L+ W+D L WN G P + +W+
Sbjct: 50 EVTVGLQL-IQLINVDEVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWR 107
>AC018890-1|AAY14687.1| 457|Homo sapiens unknown protein.
Length = 457
Score = 30.7 bits (66), Expect = 7.9
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +1
Query: 205 KIVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVGXQHLGWXPRKXLWK 381
++ V L L ++ N+ E V L+ W+D L WN G P + +W+
Sbjct: 50 EVTVGLQL-IQLINVDEVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWR 107
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.316 0.139 0.436
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,360,033
Number of Sequences: 237096
Number of extensions: 2052302
Number of successful extensions: 2460
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2455
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12158972418
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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