Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_E14
(929 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 36 4e-04
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 35 0.001
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 30 0.026
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 29 0.079
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 28 0.11
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 28 0.11
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 28 0.11
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 28 0.11
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 28 0.11
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 28 0.11
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 28 0.11
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 28 0.11
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 28 0.11
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 27 0.18
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 27 0.24
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 26 0.42
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 25 0.74
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 25 0.74
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 3.9
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 3.9
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 3.9
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 36.3 bits (80), Expect = 4e-04
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +1
Query: 127 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 291
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 292 MNWIDKRLSWNA 327
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 34.7 bits (76), Expect = 0.001
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Frame = +1
Query: 133 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 300
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 301 IDKRLSWNAGGVGXQHLGWXPRKXLWKAXT 390
+D+RL++ GG L +WK T
Sbjct: 62 VDRRLAFQ-GGKETLALSISMLARIWKPDT 90
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 30.3 bits (65), Expect = 0.026
Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 7/82 (8%)
Frame = +1
Query: 154 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 312
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 313 LSWNAGGVGXQHLGWXPRKXLW 378
L +N G ++L +W
Sbjct: 95 LRFNDFGGRLKYLTLTDASRVW 116
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 28.7 bits (61), Expect = 0.079
Identities = 21/100 (21%), Positives = 38/100 (38%), Gaps = 7/100 (7%)
Frame = +1
Query: 100 TCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRES 258
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 259 ESTVRIQADLQMNWIDKRLSWNAGGVGXQHLGWXPRKXLW 378
T + ++ W D +L WN G P + +W
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIW 103
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 28.3 bits (60), Expect = 0.11
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 244 NIRESESTVRIQADLQMNWIDKRLSWNAGGV-GXQHLGWXPRKXLWK 381
++ E + A L++ W+D L WN G + L P K LWK
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNK-LWK 70
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 28.3 bits (60), Expect = 0.11
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 244 NIRESESTVRIQADLQMNWIDKRLSWNAGGV-GXQHLGWXPRKXLWK 381
++ E + A L++ W+D L WN G + L P K LWK
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNK-LWK 70
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 28.3 bits (60), Expect = 0.11
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 244 NIRESESTVRIQADLQMNWIDKRLSWNAGGV-GXQHLGWXPRKXLWK 381
++ E + A L++ W+D L WN G + L P K LWK
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNK-LWK 70
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 28.3 bits (60), Expect = 0.11
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 244 NIRESESTVRIQADLQMNWIDKRLSWNAGGV-GXQHLGWXPRKXLWK 381
++ E + A L++ W+D L WN G + L P K LWK
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNK-LWK 70
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 28.3 bits (60), Expect = 0.11
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 244 NIRESESTVRIQADLQMNWIDKRLSWNAGGV-GXQHLGWXPRKXLWK 381
++ E + A L++ W+D L WN G + L P K LWK
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNK-LWK 70
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 28.3 bits (60), Expect = 0.11
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 244 NIRESESTVRIQADLQMNWIDKRLSWNAGGV-GXQHLGWXPRKXLWK 381
++ E + A L++ W+D L WN G + L P K LWK
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNK-LWK 70
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 28.3 bits (60), Expect = 0.11
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 244 NIRESESTVRIQADLQMNWIDKRLSWNAGGV-GXQHLGWXPRKXLWK 381
++ E + A L++ W+D L WN G + L P K LWK
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNK-LWK 138
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 28.3 bits (60), Expect = 0.11
Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = +1
Query: 244 NIRESESTVRIQADLQMNWIDKRLSWNAGGV-GXQHLGWXPRKXLWK 381
++ E + A L++ W+D L WN G + L P K LWK
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNK-LWK 138
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 28.3 bits (60), Expect = 0.11
Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 7/82 (8%)
Frame = +1
Query: 154 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 312
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 313 LSWNAGGVGXQHLGWXPRKXLW 378
L WN G + + P + +W
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIW 116
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 27.5 bits (58), Expect = 0.18
Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = +1
Query: 154 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 312
++D++L YD P D VV + + +R + I + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 313 LSWNAGGVGXQHLGWXPRKXLW 378
L +N G ++L +W
Sbjct: 95 LRFNDFGGRLKYLTLTDASRVW 116
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 27.1 bits (57), Expect = 0.24
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Frame = +1
Query: 205 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNA---GGVGXQHLGWXPRKX 372
K+ VN L ++ N+ E ++ L+ W D +L W+ GG+G L P
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRL---PPDK 107
Query: 373 LWK 381
+WK
Sbjct: 108 VWK 110
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 26.2 bits (55), Expect = 0.42
Identities = 17/92 (18%), Positives = 36/92 (39%), Gaps = 7/92 (7%)
Frame = +1
Query: 127 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 285
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 286 LQMNWIDKRLSWNAGGVGXQHLGWXPRKXLWK 381
++ +W D +L W+ G + P +W+
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWR 108
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 25.4 bits (53), Expect = 0.74
Identities = 14/61 (22%), Positives = 23/61 (37%)
Frame = +1
Query: 208 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGGVGXQHLGWXPRKXLWKAX 387
+V L+LH ++ E + + W D L WNA + P +W+
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 388 T 390
T
Sbjct: 92 T 92
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 25.4 bits (53), Expect = 0.74
Identities = 21/97 (21%), Positives = 38/97 (39%), Gaps = 5/97 (5%)
Frame = +1
Query: 106 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 270
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 271 RIQADLQMNWIDKRLSWNAGGVGXQHLGWXPRKXLWK 381
L++ W D + WN G P LWK
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWK 107
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.0 bits (47), Expect = 3.9
Identities = 15/81 (18%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Frame = +1
Query: 154 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 318
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 319 WNAGGVGXQHLGWXPRKXLWK 381
W G + P +W+
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWR 112
Score = 22.2 bits (45), Expect = 6.9
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 335 TPPAFQLSRLSIQFI*RSACIRTVDSDSRML 243
+PPAF SR + C+R + ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.0 bits (47), Expect = 3.9
Identities = 15/81 (18%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Frame = +1
Query: 154 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 318
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 319 WNAGGVGXQHLGWXPRKXLWK 381
W G + P +W+
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWR 112
Score = 22.2 bits (45), Expect = 6.9
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 335 TPPAFQLSRLSIQFI*RSACIRTVDSDSRML 243
+PPAF SR + C+R + ++ML
Sbjct: 471 SPPAFSHSRCPPEIHKSCICVRFIAEHTKML 501
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.0 bits (47), Expect = 3.9
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -3
Query: 150 GQ*CCVFAFCRTSYSTSEEKXVTRII 73
G+ CC F T Y + K VT+ I
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQCI 627
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.316 0.139 0.436
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,220
Number of Sequences: 438
Number of extensions: 3224
Number of successful extensions: 23
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30355689
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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