Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_E09
(773 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal prote... 48 7e-06
Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal prote... 48 7e-06
Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical p... 48 7e-06
Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical p... 48 7e-06
Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical pr... 48 7e-06
Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical pr... 48 7e-06
Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical p... 45 7e-05
Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical pr... 45 7e-05
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 40 0.003
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 40 0.003
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 40 0.003
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 38 0.011
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 38 0.011
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 38 0.011
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 34 0.098
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.098
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.098
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 33 0.17
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.23
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.30
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 32 0.40
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 32 0.40
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 32 0.40
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 32 0.52
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 32 0.52
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 31 0.91
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 31 0.91
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 31 0.91
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 1.6
U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical pr... 30 1.6
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 2.8
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 3.7
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 3.7
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 29 3.7
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 3.7
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 3.7
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 4.9
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 4.9
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 29 4.9
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 4.9
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.9
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 6.4
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 28 6.4
Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical pr... 28 8.5
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 28 8.5
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 8.5
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 28 8.5
>Z69337-1|CAA93269.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 48.0 bits (109), Expect = 7e-06
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +1
Query: 49 FQHPXHGSMGFYPKKRSRRHRGKVKAFPE 135
F P HG MGF PKKRSR +RG++KAFP+
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPK 34
Score = 32.7 bits (71), Expect = 0.30
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +3
Query: 33 MSHRKFSAPRSWVYGILSQKEVPSSSW*GQGVPRKTTLTKPVHLNGF 173
MSHRKFSAPR G +K + + P K +KP+HL F
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFP-KDDKSKPIHLTAF 46
>Z69336-1|CAA93268.1| 401|Caenorhabditis elegans ribosomal protein
L3 protein.
Length = 401
Score = 48.0 bits (109), Expect = 7e-06
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +1
Query: 49 FQHPXHGSMGFYPKKRSRRHRGKVKAFPE 135
F P HG MGF PKKRSR +RG++KAFP+
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPK 34
Score = 32.7 bits (71), Expect = 0.30
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +3
Query: 33 MSHRKFSAPRSWVYGILSQKEVPSSSW*GQGVPRKTTLTKPVHLNGF 173
MSHRKFSAPR G +K + + P K +KP+HL F
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFP-KDDKSKPIHLTAF 46
>Z66495-14|CAH04729.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 48.0 bits (109), Expect = 7e-06
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +1
Query: 49 FQHPXHGSMGFYPKKRSRRHRGKVKAFPE 135
F P HG MGF PKKRSR +RG++KAFP+
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPK 34
Score = 32.7 bits (71), Expect = 0.30
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +3
Query: 33 MSHRKFSAPRSWVYGILSQKEVPSSSW*GQGVPRKTTLTKPVHLNGF 173
MSHRKFSAPR G +K + + P K +KP+HL F
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFP-KDDKSKPIHLTAF 46
>Z66495-12|CAA91277.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 48.0 bits (109), Expect = 7e-06
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +1
Query: 49 FQHPXHGSMGFYPKKRSRRHRGKVKAFPE 135
F P HG MGF PKKRSR +RG++KAFP+
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPK 34
Score = 32.7 bits (71), Expect = 0.30
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +3
Query: 33 MSHRKFSAPRSWVYGILSQKEVPSSSW*GQGVPRKTTLTKPVHLNGF 173
MSHRKFSAPR G +K + + P K +KP+HL F
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFP-KDDKSKPIHLTAF 46
>Z49936-7|CAH10799.1| 353|Caenorhabditis elegans Hypothetical
protein F13B10.2c protein.
Length = 353
Score = 48.0 bits (109), Expect = 7e-06
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +1
Query: 49 FQHPXHGSMGFYPKKRSRRHRGKVKAFPE 135
F P HG MGF PKKRSR +RG++KAFP+
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPK 34
Score = 32.7 bits (71), Expect = 0.30
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +3
Query: 33 MSHRKFSAPRSWVYGILSQKEVPSSSW*GQGVPRKTTLTKPVHLNGF 173
MSHRKFSAPR G +K + + P K +KP+HL F
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFP-KDDKSKPIHLTAF 46
>Z49936-6|CAA90183.1| 401|Caenorhabditis elegans Hypothetical
protein F13B10.2a protein.
Length = 401
Score = 48.0 bits (109), Expect = 7e-06
Identities = 19/29 (65%), Positives = 23/29 (79%)
Frame = +1
Query: 49 FQHPXHGSMGFYPKKRSRRHRGKVKAFPE 135
F P HG MGF PKKRSR +RG++KAFP+
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAFPK 34
Score = 32.7 bits (71), Expect = 0.30
Identities = 19/47 (40%), Positives = 24/47 (51%)
Frame = +3
Query: 33 MSHRKFSAPRSWVYGILSQKEVPSSSW*GQGVPRKTTLTKPVHLNGF 173
MSHRKFSAPR G +K + + P K +KP+HL F
Sbjct: 1 MSHRKFSAPRHGHMGFTPKKRSRTYRGRIKAFP-KDDKSKPIHLTAF 46
>Z66495-15|CAH04728.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 44.8 bits (101), Expect = 7e-05
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +1
Query: 49 FQHPXHGSMGFYPKKRSRRHRGKVKAF 129
F P HG MGF PKKRSR +RG++KAF
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAF 32
>Z49936-8|CAH10798.1| 303|Caenorhabditis elegans Hypothetical
protein F13B10.2d protein.
Length = 303
Score = 44.8 bits (101), Expect = 7e-05
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +1
Query: 49 FQHPXHGSMGFYPKKRSRRHRGKVKAF 129
F P HG MGF PKKRSR +RG++KAF
Sbjct: 6 FSAPRHGHMGFTPKKRSRTYRGRIKAF 32
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/59 (37%), Positives = 23/59 (38%)
Frame = +3
Query: 372 FFKXXPPPPXKXXXXXXKXGLXXPPXKXGGGXXPPPPXXXXXXXXPPPXXGXXXPPPPP 548
FF P P G+ PP GG PPPP PPP G PPPPP
Sbjct: 63 FFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPP-PPPMFGAPPPPPPP 120
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = +1
Query: 430 GXPPPPXKXGGGXXXPPXXXXXXXXPPPXXXXXXXPPPPP 549
G PPPP GG PP PPP PPPPP
Sbjct: 82 GIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPP-PPPPP 120
Score = 36.3 bits (80), Expect = 0.024
Identities = 20/54 (37%), Positives = 21/54 (38%)
Frame = +3
Query: 387 PPPPXKXXXXXXKXGLXXPPXKXGGGXXPPPPXXXXXXXXPPPXXGXXXPPPPP 548
PPPP G+ PP GG PPPP PPP G P PP
Sbjct: 84 PPPPPMFAG-----GIPPPPPMMGG--IPPPPPMFGAPPPPPPPSGLGVAPQPP 130
Score = 34.3 bits (75), Expect = 0.098
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +1
Query: 436 PPPPXKXGGGXXXPPXXXXXXXXPPPXXXXXXXPPPPP 549
PPPP G G PP PPP PPPPP
Sbjct: 75 PPPP---GPGGIPPPPPMFAGGIPPPPPMMGGIPPPPP 109
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 430 GXPPPPXKXGGGXXXPPXXXXXXXXPPPXXXXXXXPPPPP 549
G PPPP GG PP PPP PP P
Sbjct: 93 GIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPPRP 132
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +3
Query: 423 KXGLXXPPXKXGGGXXPPPPXXXXXXXXPPPXXGXXXPPPP 545
K PP G PPPP PP G PPPP
Sbjct: 60 KPSFFIPPPVPN-GFIPPPPGPGGIPPPPPMFAGGIPPPPP 99
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/63 (36%), Positives = 23/63 (36%)
Frame = +3
Query: 360 GGXIFFKXXPPPPXKXXXXXXKXGLXXPPXKXGGGXXPPPPXXXXXXXXPPPXXGXXXPP 539
GG PPPP G PP GG PPPP PPP PP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP-------PPPPGGFKGGPP 785
Query: 540 PPP 548
PPP
Sbjct: 786 PPP 788
Score = 37.1 bits (82), Expect = 0.014
Identities = 21/70 (30%), Positives = 22/70 (31%)
Frame = +1
Query: 340 PPXXXXXXXXXXLKXXXPPXXKXXXXXKXRGXPPPPXKXGGGXXXPPXXXXXXXXPPPXX 519
PP + PP G PPPP GG PP PPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP------PPPGG 779
Query: 520 XXXXXPPPPP 549
PPPPP
Sbjct: 780 FKGGPPPPPP 789
Score = 37.1 bits (82), Expect = 0.014
Identities = 22/61 (36%), Positives = 22/61 (36%), Gaps = 7/61 (11%)
Frame = +3
Query: 387 PPPPXKXXXXXXKXGLXXPPXKXG-----GGX--XPPPPXXXXXXXXPPPXXGXXXPPPP 545
PPPP G PP G GG PPPP PPP G PPP
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 546 P 548
P
Sbjct: 787 P 787
Score = 35.1 bits (77), Expect = 0.056
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Frame = +3
Query: 387 PPPPXKXXXXXXKXGLXXPPXKXGG---GXXPPPPXXXXXXXXPPPXXGXXXPPPP 545
PPPP G PP GG PPPP PPP G P P
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 2/37 (5%)
Frame = +3
Query: 444 PXKXGGGXXPPPPXXXXXXXXP--PPXXGXXXPPPPP 548
P GG PP P PP G PPPPP
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPP 732
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +2
Query: 392 PPXXXXXXXXKXGAXXPPXKXGGGXXAXPPXKXXXXXXPPPXXGXXXPPPPP 547
PP G PP G P PP G PPPPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/63 (36%), Positives = 23/63 (36%)
Frame = +3
Query: 360 GGXIFFKXXPPPPXKXXXXXXKXGLXXPPXKXGGGXXPPPPXXXXXXXXPPPXXGXXXPP 539
GG PPPP G PP GG PPPP PPP PP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP-------PPPPGGFKGGPP 785
Query: 540 PPP 548
PPP
Sbjct: 786 PPP 788
Score = 37.1 bits (82), Expect = 0.014
Identities = 21/70 (30%), Positives = 22/70 (31%)
Frame = +1
Query: 340 PPXXXXXXXXXXLKXXXPPXXKXXXXXKXRGXPPPPXKXGGGXXXPPXXXXXXXXPPPXX 519
PP + PP G PPPP GG PP PPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP------PPPGG 779
Query: 520 XXXXXPPPPP 549
PPPPP
Sbjct: 780 FKGGPPPPPP 789
Score = 37.1 bits (82), Expect = 0.014
Identities = 22/61 (36%), Positives = 22/61 (36%), Gaps = 7/61 (11%)
Frame = +3
Query: 387 PPPPXKXXXXXXKXGLXXPPXKXG-----GGX--XPPPPXXXXXXXXPPPXXGXXXPPPP 545
PPPP G PP G GG PPPP PPP G PPP
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Query: 546 P 548
P
Sbjct: 787 P 787
Score = 35.1 bits (77), Expect = 0.056
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Frame = +3
Query: 387 PPPPXKXXXXXXKXGLXXPPXKXGG---GXXPPPPXXXXXXXXPPPXXGXXXPPPP 545
PPPP G PP GG PPPP PPP G P P
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 2/37 (5%)
Frame = +3
Query: 444 PXKXGGGXXPPPPXXXXXXXXP--PPXXGXXXPPPPP 548
P GG PP P PP G PPPPP
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPP 732
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +2
Query: 392 PPXXXXXXXXKXGAXXPPXKXGGGXXAXPPXKXXXXXXPPPXXGXXXPPPPP 547
PP G PP G P PP G PPPPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 39.5 bits (88), Expect = 0.003
Identities = 23/63 (36%), Positives = 23/63 (36%)
Frame = +3
Query: 360 GGXIFFKXXPPPPXKXXXXXXKXGLXXPPXKXGGGXXPPPPXXXXXXXXPPPXXGXXXPP 539
GG PPPP G PP GG PPPP PPP PP
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP-------PPPPGGFKGGPP 368
Query: 540 PPP 548
PPP
Sbjct: 369 PPP 371
Score = 37.1 bits (82), Expect = 0.014
Identities = 21/70 (30%), Positives = 22/70 (31%)
Frame = +1
Query: 340 PPXXXXXXXXXXLKXXXPPXXKXXXXXKXRGXPPPPXKXGGGXXXPPXXXXXXXXPPPXX 519
PP + PP G PPPP GG PP PPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPP------PPPGG 362
Query: 520 XXXXXPPPPP 549
PPPPP
Sbjct: 363 FKGGPPPPPP 372
Score = 37.1 bits (82), Expect = 0.014
Identities = 22/61 (36%), Positives = 22/61 (36%), Gaps = 7/61 (11%)
Frame = +3
Query: 387 PPPPXKXXXXXXKXGLXXPPXKXG-----GGX--XPPPPXXXXXXXXPPPXXGXXXPPPP 545
PPPP G PP G GG PPPP PPP G PPP
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Query: 546 P 548
P
Sbjct: 370 P 370
Score = 35.1 bits (77), Expect = 0.056
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Frame = +3
Query: 387 PPPPXKXXXXXXKXGLXXPPXKXGG---GXXPPPPXXXXXXXXPPPXXGXXXPPPP 545
PPPP G PP GG PPPP PPP G P P
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 2/37 (5%)
Frame = +3
Query: 444 PXKXGGGXXPPPPXXXXXXXXP--PPXXGXXXPPPPP 548
P GG PP P PP G PPPPP
Sbjct: 279 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPP 315
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +2
Query: 392 PPXXXXXXXXKXGAXXPPXKXGGGXXAXPPXKXXXXXXPPPXXGXXXPPPPP 547
PP G PP G P PP G PPPPP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 347
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 37.5 bits (83), Expect = 0.011
Identities = 23/65 (35%), Positives = 23/65 (35%), Gaps = 11/65 (16%)
Frame = +3
Query: 387 PPPPXKXXXXXXKXGLXXPPXKXGG------GXXPP-----PPXXXXXXXXPPPXXGXXX 533
PPPP K G PP G G PP PP PPP G
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 298
Query: 534 PPPPP 548
PPPPP
Sbjct: 299 PPPPP 303
Score = 36.7 bits (81), Expect = 0.018
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +3
Query: 387 PPPPXKXXXXXXKXGLXXPPXKXGGGXXPPPPXXXXXXXXPPPXXGXXXPPP 542
PPPP G PP + G PPPP PP PPP
Sbjct: 272 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 323
Score = 36.3 bits (80), Expect = 0.024
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Frame = +3
Query: 387 PPPPXKXXXXXXKXGLXXPPXKXGGGXXPPP----PXXXXXXXXPPPXXGXXXPPP 542
PPPP G PP G PPP P PPP G PPP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 292
Score = 31.5 bits (68), Expect = 0.69
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +1
Query: 391 PPXXKXXXXXKXRGXPPPPXKXGGGXXXPPXXXXXXXXPPPXXXXXXXPPPPP 549
PP G PPPP GG PP PPP PPP
Sbjct: 265 PPPRTGSPPPPPTGSPPPPP--AGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 315
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/53 (26%), Positives = 16/53 (30%)
Frame = +2
Query: 386 PXPPXXXXXXXXKXGAXXPPXKXGGGXXAXPPXKXXXXXXPPPXXGXXXPPPP 544
P PP + G+ PP G PPP PPPP
Sbjct: 281 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 37.5 bits (83), Expect = 0.011
Identities = 23/65 (35%), Positives = 23/65 (35%), Gaps = 11/65 (16%)
Frame = +3
Query: 387 PPPPXKXXXXXXKXGLXXPPXKXGG------GXXPP-----PPXXXXXXXXPPPXXGXXX 533
PPPP K G PP G G PP PP PPP G
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 319
Query: 534 PPPPP 548
PPPPP
Sbjct: 320 PPPPP 324
Score = 36.7 bits (81), Expect = 0.018
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +3
Query: 387 PPPPXKXXXXXXKXGLXXPPXKXGGGXXPPPPXXXXXXXXPPPXXGXXXPPP 542
PPPP G PP + G PPPP PP PPP
Sbjct: 293 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 344
Score = 36.3 bits (80), Expect = 0.024
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Frame = +3
Query: 387 PPPPXKXXXXXXKXGLXXPPXKXGGGXXPPP----PXXXXXXXXPPPXXGXXXPPP 542
PPPP G PP G PPP P PPP G PPP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 313
Score = 31.5 bits (68), Expect = 0.69
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +1
Query: 391 PPXXKXXXXXKXRGXPPPPXKXGGGXXXPPXXXXXXXXPPPXXXXXXXPPPPP 549
PP G PPPP GG PP PPP PPP
Sbjct: 286 PPPRTGSPPPPPTGSPPPPP--AGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 336
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/53 (26%), Positives = 16/53 (30%)
Frame = +2
Query: 386 PXPPXXXXXXXXKXGAXXPPXKXGGGXXAXPPXKXXXXXXPPPXXGXXXPPPP 544
P PP + G+ PP G PPP PPPP
Sbjct: 302 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 37.5 bits (83), Expect = 0.011
Identities = 23/65 (35%), Positives = 23/65 (35%), Gaps = 11/65 (16%)
Frame = +3
Query: 387 PPPPXKXXXXXXKXGLXXPPXKXGG------GXXPP-----PPXXXXXXXXPPPXXGXXX 533
PPPP K G PP G G PP PP PPP G
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 304
Query: 534 PPPPP 548
PPPPP
Sbjct: 305 PPPPP 309
Score = 36.7 bits (81), Expect = 0.018
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +3
Query: 387 PPPPXKXXXXXXKXGLXXPPXKXGGGXXPPPPXXXXXXXXPPPXXGXXXPPP 542
PPPP G PP + G PPPP PP PPP
Sbjct: 278 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 329
Score = 36.3 bits (80), Expect = 0.024
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Frame = +3
Query: 387 PPPPXKXXXXXXKXGLXXPPXKXGGGXXPPP----PXXXXXXXXPPPXXGXXXPPP 542
PPPP G PP G PPP P PPP G PPP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPP 298
Score = 31.5 bits (68), Expect = 0.69
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +1
Query: 391 PPXXKXXXXXKXRGXPPPPXKXGGGXXXPPXXXXXXXXPPPXXXXXXXPPPPP 549
PP G PPPP GG PP PPP PPP
Sbjct: 271 PPPRTGSPPPPPTGSPPPPP--AGGSPPPPRAGSPPPPPPPRGSPPTGSLPPP 321
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/53 (26%), Positives = 16/53 (30%)
Frame = +2
Query: 386 PXPPXXXXXXXXKXGAXXPPXKXGGGXXAXPPXKXXXXXXPPPXXGXXXPPPP 544
P PP + G+ PP G PPP PPPP
Sbjct: 287 PPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 34.3 bits (75), Expect = 0.098
Identities = 19/54 (35%), Positives = 20/54 (37%)
Frame = -2
Query: 547 GGGGGXXXPXXGGGXXXXXXFXGGGGXXPPPXFXGGXXSPXFXXXXXXXXGGGG 386
GGGGG GG + GGGG P GG S GGGG
Sbjct: 208 GGGGGDRYGGGGGDRYGGDRYGGGGGRRGSPDRRGGFRSGGGGGGYMRSGGGGG 261
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.3 bits (75), Expect = 0.098
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 441 PPXKXGGGXXPPPPXXXXXXXXPPPXXGXXXPPPPP 548
PP G PPPP PP PPPPP
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 322
Score = 31.9 bits (69), Expect = 0.52
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 436 PPPPXKXGGGXXXPPXXXXXXXXPPPXXXXXXXPPPPP 549
PPPP PP PPP PPPPP
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPP 302
Score = 31.1 bits (67), Expect = 0.91
Identities = 20/60 (33%), Positives = 21/60 (35%), Gaps = 6/60 (10%)
Frame = +3
Query: 387 PPPPXKXXXXXXKXGLXXPPXKXGGGXXPPPPXXXXXXXXP------PPXXGXXXPPPPP 548
PPPP G+ PP G P PP P PP G PPPPP
Sbjct: 287 PPPPPSS-------GMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 339
Score = 31.1 bits (67), Expect = 0.91
Identities = 18/74 (24%), Positives = 19/74 (25%)
Frame = +1
Query: 328 PWXTPPXXXXXXXXXXLKXXXPPXXKXXXXXKXRGXPPPPXKXGGGXXXPPXXXXXXXXP 507
P PP + PP PPPP G P
Sbjct: 314 PGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPA 373
Query: 508 PPXXXXXXXPPPPP 549
PP PPPPP
Sbjct: 374 PPSGHGMIPPPPPP 387
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +1
Query: 391 PPXXKXXXXXKXRGXPPPPXKXGGGXXXPPXXXXXXXXPPPXXXXXXXPPPPP 549
PP + G PPPP G PP PPP PPPP
Sbjct: 302 PPPGRTPGPPGMPGMPPPPPPSRFG---PPGMGGMPPPPPPGMRYPGGMPPPP 351
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 436 PPPPXKXGGGXXXPPXXXXXXXXPPPXXXXXXXPPPPP 549
P PP G PP P P PPPPP
Sbjct: 285 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 322
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 436 PPPPXKXGGGXXXPPXXXXXXXXPPPXXXXXXXPPPPP 549
PPPP P PPP PPPPP
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPP 301
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.098
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 441 PPXKXGGGXXPPPPXXXXXXXXPPPXXGXXXPPPPP 548
PP G PPPP PP PPPPP
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 332
Score = 31.9 bits (69), Expect = 0.52
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 436 PPPPXKXGGGXXXPPXXXXXXXXPPPXXXXXXXPPPPP 549
PPPP PP PPP PPPPP
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPP 312
Score = 31.1 bits (67), Expect = 0.91
Identities = 20/60 (33%), Positives = 21/60 (35%), Gaps = 6/60 (10%)
Frame = +3
Query: 387 PPPPXKXXXXXXKXGLXXPPXKXGGGXXPPPPXXXXXXXXP------PPXXGXXXPPPPP 548
PPPP G+ PP G P PP P PP G PPPPP
Sbjct: 297 PPPPPSS-------GMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 349
Score = 31.1 bits (67), Expect = 0.91
Identities = 18/74 (24%), Positives = 19/74 (25%)
Frame = +1
Query: 328 PWXTPPXXXXXXXXXXLKXXXPPXXKXXXXXKXRGXPPPPXKXGGGXXXPPXXXXXXXXP 507
P PP + PP PPPP G P
Sbjct: 324 PGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPA 383
Query: 508 PPXXXXXXXPPPPP 549
PP PPPPP
Sbjct: 384 PPSGHGMIPPPPPP 397
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = +1
Query: 391 PPXXKXXXXXKXRGXPPPPXKXGGGXXXPPXXXXXXXXPPPXXXXXXXPPPPP 549
PP + G PPPP G PP PPP PPPP
Sbjct: 312 PPPGRTPGPPGMPGMPPPPPPSRFG---PPGMGGMPPPPPPGMRYPGGMPPPP 361
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 436 PPPPXKXGGGXXXPPXXXXXXXXPPPXXXXXXXPPPPP 549
P PP G PP P P PPPPP
Sbjct: 295 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 332
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 436 PPPPXKXGGGXXXPPXXXXXXXXPPPXXXXXXXPPPPP 549
PPPP P PPP PPPPP
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPP 311
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +2
Query: 428 GAXXPPXKXGGGXXAXPPXKXXXXXXPPPXXGXXXPPPPP 547
G P GGG P PPP G PPPPP
Sbjct: 17 GFLFPMAGGGGGGGGCAPAAPACAPPPPPMCGCAPPPPPP 56
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 457 GGGXXXPPXXXXXXXXPPPXXXXXXXPPPPP 549
GGG P PPP PPPPP
Sbjct: 27 GGGGGCAPAAPACAPPPPPMCGCAPPPPPPP 57
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -1
Query: 548 GGGGGXXXXXXXGGGXXXXXXXXGGXXXPPPXFXGGGG 435
GGGGG GGG GG PPP GGG
Sbjct: 27 GGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGG 64
Score = 31.1 bits (67), Expect = 0.91
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 543 GGGGXXXPXXGGGXXXXXXXXGGXAXXPPPFXXGG 439
GGGG GGG GG A PPP GG
Sbjct: 86 GGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGG 120
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 548 GGGGGXXXXXXXGGGXXXXXXXXGGXXXPPPXFXGGGG 435
GGGGG GGG GG PPP GG
Sbjct: 26 GGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGG 63
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 548 GGGGGXXXXXXXGGGXXXXXXXXGGXXXPPPXFXGGGG 435
G GGG GGG GG PPP GGG
Sbjct: 84 GCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGG 121
Score = 28.7 bits (61), Expect = 4.9
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -2
Query: 547 GGGGGXXXPXXGGGXXXXXXFXGGGGXXPPPXFXGGXXSPXFXXXXXXXXGGGG 386
GGGGG G G GGGG GG P GGGG
Sbjct: 73 GGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGG 126
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 32.7 bits (71), Expect = 0.30
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +3
Query: 387 PPPPXKXXXXXXKXGLXXPPXKXGGGXXPPPPXXXXXXXXPPPXXGXXXPPPP 545
PPPP G PP GG PPPP PP PPP
Sbjct: 411 PPPPG----GPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPPVGAPPP 459
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 430 GXPPPPXKXGGGXXXPPXXXXXXXXPPPXXXXXXXPPPP 546
G PPP G PP PPP PPP
Sbjct: 410 GPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPP 448
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 32.3 bits (70), Expect = 0.40
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +3
Query: 387 PPPPXKXXXXXXKXGLXXPPXKXGGGXXPPPPXXXXXXXXPPPXXGXXXPPPPP 548
PPPP + P PPPP PPP PPPPP
Sbjct: 768 PPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPP-----PPPPPP 816
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 32.3 bits (70), Expect = 0.40
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = +3
Query: 387 PPPPXKXXXXXXKXGLXXPPXKXGGGXXPPPPXXXXXXXXPPPXXGXXXPPPPP 548
PPPP + P PPPP PPP PPPPP
Sbjct: 768 PPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPP-----PPPPPP 816
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 32.3 bits (70), Expect = 0.40
Identities = 22/67 (32%), Positives = 22/67 (32%), Gaps = 13/67 (19%)
Frame = +3
Query: 387 PPPPXKXXXXXXKXG---LXXPPXKXGGGXXPPPPXXXXXXXX----------PPPXXGX 527
PPPP G PP G G PPPP PPP G
Sbjct: 44 PPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGT 103
Query: 528 XXPPPPP 548
PPPPP
Sbjct: 104 GTPPPPP 110
Score = 30.7 bits (66), Expect = 1.2
Identities = 21/66 (31%), Positives = 21/66 (31%), Gaps = 12/66 (18%)
Frame = +3
Query: 387 PPPPXKXXXXXXKXGLXX----PPXKXGGGXXPPPPXXXXXXXX--------PPPXXGXX 530
PPPP G PP K G PPP PPP G
Sbjct: 200 PPPPTGEPQDLSAEGYASRRPPPPPKGTGSPTPPPTGEPQDLSGEGNASRRPPPPPKGTG 259
Query: 531 XPPPPP 548
PPPPP
Sbjct: 260 SPPPPP 265
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 8/46 (17%)
Frame = +1
Query: 436 PPPPXKXGGGXXXPPXXXXXXXX--------PPPXXXXXXXPPPPP 549
PPPP K G PP PPP PPPPP
Sbjct: 127 PPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPP 172
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 8/46 (17%)
Frame = +1
Query: 436 PPPPXKXGGGXXXPPXXXXXXXX--------PPPXXXXXXXPPPPP 549
PPPP K G PP PPP PPPPP
Sbjct: 158 PPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPPKGTGTPPPPP 203
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 8/46 (17%)
Frame = +1
Query: 436 PPPPXKXGGGXXXPPXXXXXXXX--------PPPXXXXXXXPPPPP 549
PPPP K G PP PPP PPPPP
Sbjct: 220 PPPPPKGTGSPTPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPP 265
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 9/44 (20%)
Frame = +3
Query: 441 PPXKXGGGXXPPPPXXXXXXXX---------PPPXXGXXXPPPP 545
PP G G PPPP PPP G PPPP
Sbjct: 252 PPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPP 295
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/43 (34%), Positives = 15/43 (34%)
Frame = +1
Query: 421 KXRGXPPPPXKXGGGXXXPPXXXXXXXXPPPXXXXXXXPPPPP 549
K G PPPP G PPP PPPPP
Sbjct: 69 KGTGTPPPPPT-GEPQDLSAEEGNASRRPPPPPKGTGTPPPPP 110
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 8/46 (17%)
Frame = +1
Query: 436 PPPPXKXGGGXXXPPXXXXXXXX--------PPPXXXXXXXPPPPP 549
PPPP K G PP PPP PPPPP
Sbjct: 33 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGTPPPPP 78
Score = 28.3 bits (60), Expect = 6.4
Identities = 16/46 (34%), Positives = 16/46 (34%), Gaps = 8/46 (17%)
Frame = +1
Query: 436 PPPPXKXGGGXXXPPXXXXXXXX--------PPPXXXXXXXPPPPP 549
PPPP K G PP PPP PPPPP
Sbjct: 96 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGSPPPPP 141
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.9 bits (69), Expect = 0.52
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 471 PPPPXXXXXXXXPPPXXGXXXPPPPP 548
PPPP PPP PPPPP
Sbjct: 46 PPPPICPPQFCPPPPMCPPPPPPPPP 71
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/64 (28%), Positives = 19/64 (29%)
Frame = +3
Query: 357 WGGXIFFKXXPPPPXKXXXXXXKXGLXXPPXKXGGGXXPPPPXXXXXXXXPPPXXGXXXP 536
+GG P PP PP PPPP PPP P
Sbjct: 19 FGGCCSMGPPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPP 78
Query: 537 PPPP 548
PP P
Sbjct: 79 PPMP 82
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 436 PPPPXKXGGGXXXPPXXXXXXXXPPPXXXXXXXPPPPP 549
PPP PP PPP PPPPP
Sbjct: 34 PPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPP 71
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 436 PPPPXKXGGGXXXPPXXXXXXXXPPPXXXXXXXPPPPP 549
PPPP PP PP PPPPP
Sbjct: 33 PPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPP 70
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.9 bits (69), Expect = 0.52
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +3
Query: 444 PXKXGGGXXPPPPXXXXXXXXPPPXXGXXXPPPPP 548
P G PPPP PPP G PPPPP
Sbjct: 569 PQNLSGAPPPPPP--------PPPMLGGPPPPPPP 595
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 436 PPPPXKXGGGXXXPPXXXXXXXXPPPXXXXXXXPPPPP 549
PPPP PP PPP PPPPP
Sbjct: 564 PPPPLPQNLSGAPPPPPP-----PPPMLGGPPPPPPPP 596
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 31.1 bits (67), Expect = 0.91
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 429 GLXXPPXKXGGGXXPPPPXXXXXXXXPPPXXGXXXPPPPP 548
G+ PP P PP PPP G PPPPP
Sbjct: 766 GVGVPPPPPPPSAIPLPPRLQGGIPPPPPL-GIIPPPPPP 804
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 430 GXPPPPXKXGGGXXXPPXXXXXXXXPPPXXXXXXXPPPPP 549
G PPPP PP PPP PPPPP
Sbjct: 768 GVPPPPPPPSA-IPLPPRLQGGIPPPPPLGIIP--PPPPP 804
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 31.1 bits (67), Expect = 0.91
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = -2
Query: 547 GGGGGXXXPXXGGGXXXXXXFXGGG-GXXPPPXFXGGXXSPXFXXXXXXXXGGGG 386
G GGG GGG + GGG G P GG P GGGG
Sbjct: 195 GYGGGMGGGGYGGGGMGGGGYGGGGDGGYGPSGGYGGGYGPGGGYGMGGGGGGGG 249
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = -2
Query: 547 GGGGGXXXPXXGGGXXXXXXFXGGG-GXXPPPXFXGGXXSPXFXXXXXXXXGGGG 386
GGGGG GGG + GGG G F GG GGGG
Sbjct: 155 GGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGG 209
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 31.1 bits (67), Expect = 0.91
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 429 GLXXPPXKXGGGXXPPPPXXXXXXXXPPPXXGXXXPPPPP 548
G+ PP P PP PPP G PPPPP
Sbjct: 766 GVGVPPPPPPPSAIPLPPRLQGGIPPPPPL-GIIPPPPPP 804
Score = 28.3 bits (60), Expect = 6.4
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +1
Query: 430 GXPPPPXKXGGGXXXPPXXXXXXXXPPPXXXXXXXPPPPP 549
G PPPP PP PPP PPPPP
Sbjct: 768 GVPPPPPPPSA-IPLPPRLQGGIPPPPPLGIIP--PPPPP 804
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/39 (43%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Frame = -2
Query: 547 GGGGGXXXPXX---GGGXXXXXXFXGGGGXXPPPXFXGG 440
GGGGG P GG GGGG PPP GG
Sbjct: 43 GGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGG 81
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -2
Query: 544 GGGGXXXPXXGGGXXXXXXFXGGGGXXPPPXFXGG 440
GGGG GGG GGGG P GG
Sbjct: 198 GGGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGG 232
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -2
Query: 544 GGGGXXXPXXGGGXXXXXXFXGGGGXXPPPXFXGG 440
GGGG GGG GGGG P GG
Sbjct: 177 GGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGG 211
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/39 (43%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Frame = -2
Query: 547 GGGGGXXXPXX---GGGXXXXXXFXGGGGXXPPPXFXGG 440
GGGGG P GG GGGG PPP GG
Sbjct: 43 GGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGG 81
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -2
Query: 544 GGGGXXXPXXGGGXXXXXXFXGGGGXXPPPXFXGG 440
GGGG GGG GGGG P GG
Sbjct: 198 GGGGYAVAPSGGGGCGGGGSSGGGGYASAPSGGGG 232
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = -2
Query: 544 GGGGXXXPXXGGGXXXXXXFXGGGGXXPPPXFXGG 440
GGGG GGG GGGG P GG
Sbjct: 177 GGGGYAVAPSGGGGCGGGGSSGGGGYAVAPSGGGG 211
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Frame = +1
Query: 436 PPPPXKX--GGGXXXPPXXXXXXXXPPPXXXXXXXPPPPP 549
PPPP K GG PP PPP PP P
Sbjct: 125 PPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTP 164
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = +3
Query: 441 PPXKX-GGGXXPPPPXXXXXXXXPPPXXGXXXPPP--PP 548
PP K GG PPPP PPP PP PP
Sbjct: 127 PPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPP 165
>U41031-3|AAA82620.1| 164|Caenorhabditis elegans Hypothetical
protein C16B8.3 protein.
Length = 164
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 429 GLXXPPXKXGGGXXPPPPXXXXXXXXPPPXXG 524
G PP G G PPPP PPP G
Sbjct: 38 GAPPPPVGAGVGYAPPPPRPYGATYAPPPPMG 69
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = -3
Query: 546 GGGGGXXXPXXGGGXXXXXXXXGGXAXXPPPFXXGGXXAP 427
G GGG GGG G PPP+ GG P
Sbjct: 187 GPGGGGGGMGGGGGSGGSGGGSGRFPPPPPPYGGGGRRRP 226
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 541 GGGXXXPXXGGGXXXXXXFXGGGGXXPPP 455
GGG P GGG GGGG PP
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGGPTGPP 643
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/56 (26%), Positives = 18/56 (32%)
Frame = +3
Query: 375 FKXXPPPPXKXXXXXXKXGLXXPPXKXGGGXXPPPPXXXXXXXXPPPXXGXXXPPP 542
+ PPP + + GGG PPPP PP G PP
Sbjct: 648 YSPYPPPQQQQQHQAQQAQSQAHYGPPGGGQGPPPPPQGQQYYGGPPPPGQPYGPP 703
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +2
Query: 440 PPXKXGGGXXAXPPXKXXXXXXPPPXXGXXXPPPPP 547
PP G PP PP G PPPPP
Sbjct: 65 PPGPHGMPFMGGPPPHHQYHLQYPPPHGLGPPPPPP 100
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/56 (26%), Positives = 18/56 (32%)
Frame = +3
Query: 375 FKXXPPPPXKXXXXXXKXGLXXPPXKXGGGXXPPPPXXXXXXXXPPPXXGXXXPPP 542
+ PPP + + GGG PPPP PP G PP
Sbjct: 648 YSPYPPPQQQQQHQAQQAQSQAHYGPPGGGQGPPPPPQGQQYYGGPPPPGQPYGPP 703
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 541 GGGXXXPXXGGGXXXXXXFXGGGGXXPPP 455
GGG P GGG GGGG PP
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGGPTGPP 643
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/56 (28%), Positives = 17/56 (30%), Gaps = 2/56 (3%)
Frame = +3
Query: 387 PPPPXKXXXXXXKXGLXXPPXKXGG--GXXPPPPXXXXXXXXPPPXXGXXXPPPPP 548
PPPP + PP G G P P P PPPPP
Sbjct: 558 PPPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPP 613
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 471 PPPPXXXXXXXXPPPXXGXXXPPPPP 548
PPPP P G PPPPP
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPPP 655
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/56 (28%), Positives = 17/56 (30%), Gaps = 2/56 (3%)
Frame = +3
Query: 387 PPPPXKXXXXXXKXGLXXPPXKXGG--GXXPPPPXXXXXXXXPPPXXGXXXPPPPP 548
PPPP + PP G G P P P PPPPP
Sbjct: 384 PPPPTRVESHGLAPARPPPPPPSSGTRGIAPSRPLPQAPNYGTPENRPHAVPPPPP 439
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 471 PPPPXXXXXXXXPPPXXGXXXPPPPP 548
PPPP P G PPPPP
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPPP 481
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/54 (35%), Positives = 19/54 (35%)
Frame = +3
Query: 387 PPPPXKXXXXXXKXGLXXPPXKXGGGXXPPPPXXXXXXXXPPPXXGXXXPPPPP 548
PPPP G PP PPPP PP G PPPPP
Sbjct: 40 PPPPWHRNRGPPPFG---PPPPWD---RPPPPWRRPPWHRRPPW-GLPPPPPPP 86
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/57 (28%), Positives = 18/57 (31%)
Frame = +3
Query: 378 KXXPPPPXKXXXXXXKXGLXXPPXKXGGGXXPPPPXXXXXXXXPPPXXGXXXPPPPP 548
K PPPP + P + PPPP P PPPPP
Sbjct: 471 KPAPPPPSRIPNPSPSP----QPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPPPPP 523
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/62 (33%), Positives = 23/62 (37%)
Frame = +3
Query: 360 GGXIFFKXXPPPPXKXXXXXXKXGLXXPPXKXGGGXXPPPPXXXXXXXXPPPXXGXXXPP 539
GG ++ PPPP PP GG PPP PPP G PP
Sbjct: 1564 GGMNGWRGGPPPPRGGSHCQG------PPPLMGG----PPPRLGMPPPGPPPPNG--GPP 1611
Query: 540 PP 545
PP
Sbjct: 1612 PP 1613
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +2
Query: 440 PPXKXGGGXXAXPPXKXXXXXXPPPXXGXXXPPPPP 547
PP GG PP PPP G P PPP
Sbjct: 1573 PPPPRGGSHCQGPPP---LMGGPPPRLGMPPPGPPP 1605
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +1
Query: 439 PPPXKXGGGXXXPPXXXXXXXXPPPXXXXXXXPPPPP 549
PPP P PPP PPPPP
Sbjct: 90 PPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPP 126
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.3 bits (60), Expect = 6.4
Identities = 19/60 (31%), Positives = 19/60 (31%), Gaps = 6/60 (10%)
Frame = +3
Query: 387 PPPPXKXXXXXXKXGLXXPPXKXG------GGXXPPPPXXXXXXXXPPPXXGXXXPPPPP 548
PPPP PP G G PPPP PP PPPPP
Sbjct: 504 PPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPP--------PPVGMANGGPPPPP 555
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +3
Query: 471 PPPPXXXXXXXXPPPXXGXXXPPPPP 548
PPPP PPP PPP P
Sbjct: 55 PPPPPCPAQFCPPPPICPPPPPPPMP 80
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 441 PPXKXGGGXXPPPPXXXXXXXXPPPXXGXXXPPPPP 548
PP PPPP PPP PPPPP
Sbjct: 56 PPPPCPAQFCPPPP-----ICPPPPPPPMPCPPPPP 86
>Z70309-6|CAA94360.1| 324|Caenorhabditis elegans Hypothetical
protein R102.6 protein.
Length = 324
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 456 GGGXXPPPPXXXXXXXXPPPXXGXXXPPPPP 548
G PPPP PPP PPPP
Sbjct: 238 GCSCLPPPPSPVCMPPPPPPCPMPIPCPPPP 268
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +3
Query: 462 GXXPPPPXXXXXXXXPPPXXGXXXPPPPP 548
G P PP PP PPPPP
Sbjct: 120 GGVPAPPNPPRTCCPPPTPAAPPPPPPPP 148
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 27.9 bits (59), Expect = 8.5
Identities = 17/52 (32%), Positives = 18/52 (34%)
Frame = +2
Query: 392 PPXXXXXXXXKXGAXXPPXKXGGGXXAXPPXKXXXXXXPPPXXGXXXPPPPP 547
PP GA PP G G + P PPP G PPPP
Sbjct: 742 PPPPMFQQGFNAGAPPPPFGRGAGPMSSFP--------PPPRGGMHHMPPPP 785
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/65 (30%), Positives = 21/65 (32%), Gaps = 1/65 (1%)
Frame = -2
Query: 547 GGGGGXXXPXXGGGXXXXXXFXGGGGXXPPPXFXGGXXSPXFXXXXXXXXGGGGXFLKKI 368
GGGGG GGG GG G GG GGGG +
Sbjct: 330 GGGGGGYSTGGGGGRADSGGAAGGAGGAGGYSGGGGGGGGGAAAGGGYNAGGGGGGAPQA 389
Query: 367 XP-PQ 356
P PQ
Sbjct: 390 APAPQ 394
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,036,018
Number of Sequences: 27780
Number of extensions: 281433
Number of successful extensions: 3130
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1325
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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