Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_FL5_E08
         (862 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X13382-1|CAA31759.1|  407|Drosophila melanogaster protein ( Dros...   100   5e-21
BT025959-1|ABG02203.1|  233|Drosophila melanogaster IP15855p pro...   100   5e-21
AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p pro...   100   5e-21
AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA...   100   5e-21
X06881-1|CAA29998.1|  123|Drosophila melanogaster protein ( Dros...    51   2e-06

>X13382-1|CAA31759.1|  407|Drosophila melanogaster protein (
           Drosophila melanogastermRNA for put. ribosomal protein
           L1. ).
          Length = 407

 Score = 99.5 bits (237), Expect = 5e-21
 Identities = 52/81 (64%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
 Frame = +2

Query: 176 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGWW 355
           LP VFKAPIRPD+VN+VH  + +N+RQ Y VS+ AGHQTSAESWGTGRAVARIPRVRG  
Sbjct: 27  LPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGG- 85

Query: 356 YSXVRSGXPSV-TXXRGGXXF 415
               RSG  +     RGG  F
Sbjct: 86  -GTHRSGQGAFGNMCRGGRMF 105


>BT025959-1|ABG02203.1|  233|Drosophila melanogaster IP15855p
           protein.
          Length = 233

 Score = 99.5 bits (237), Expect = 5e-21
 Identities = 52/81 (64%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
 Frame = +2

Query: 176 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGWW 355
           LP VFKAPIRPD+VN+VH  + +N+RQ Y VS+ AGHQTSAESWGTGRAVARIPRVRG  
Sbjct: 27  LPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGG- 85

Query: 356 YSXVRSGXPSV-TXXRGGXXF 415
               RSG  +     RGG  F
Sbjct: 86  -GTHRSGQGAFGNMCRGGRMF 105


>AY069485-1|AAL39630.1|  401|Drosophila melanogaster LD21756p
           protein.
          Length = 401

 Score = 99.5 bits (237), Expect = 5e-21
 Identities = 52/81 (64%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
 Frame = +2

Query: 176 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGWW 355
           LP VFKAPIRPD+VN+VH  + +N+RQ Y VS+ AGHQTSAESWGTGRAVARIPRVRG  
Sbjct: 27  LPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGG- 85

Query: 356 YSXVRSGXPSV-TXXRGGXXF 415
               RSG  +     RGG  F
Sbjct: 86  -GTHRSGQGAFGNMCRGGRMF 105


>AE014297-4196|AAG22173.1|  401|Drosophila melanogaster CG5502-PA
           protein.
          Length = 401

 Score = 99.5 bits (237), Expect = 5e-21
 Identities = 52/81 (64%), Positives = 59/81 (72%), Gaps = 1/81 (1%)
 Frame = +2

Query: 176 LPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGWW 355
           LP VFKAPIRPD+VN+VH  + +N+RQ Y VS+ AGHQTSAESWGTGRAVARIPRVRG  
Sbjct: 27  LPAVFKAPIRPDVVNEVHQLLRRNNRQAYAVSELAGHQTSAESWGTGRAVARIPRVRGG- 85

Query: 356 YSXVRSGXPSV-TXXRGGXXF 415
               RSG  +     RGG  F
Sbjct: 86  -GTHRSGQGAFGNMCRGGRMF 105


>X06881-1|CAA29998.1|  123|Drosophila melanogaster protein (
           Drosophila gene forribosomal protein L1 fragment. ).
          Length = 123

 Score = 51.2 bits (117), Expect = 2e-06
 Identities = 29/45 (64%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
 Frame = +2

Query: 284 HQTSAESWGTGRAVARIPRVRGWWYSXVRSGXPSV-TXXRGGXXF 415
           HQTSAESWGTGRAVARIPRVRG      RSG  +     RGG  F
Sbjct: 1   HQTSAESWGTGRAVARIPRVRGG--GTHRSGQGAFGNMCRGGRMF 43


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,645,182
Number of Sequences: 53049
Number of extensions: 582484
Number of successful extensions: 1319
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1309
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4147514904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)