Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_E02
(1063 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 35 0.13
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 34 0.17
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 32 0.67
12_02_1174 - 26696869-26698191 32 0.89
08_02_1084 - 24232968-24234779 32 0.89
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 31 1.2
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.5
08_01_0059 - 394001-394708 30 2.7
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 30 3.6
03_03_0259 + 15937549-15938307,15938393-15938767 30 3.6
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 4.7
11_07_0007 - 27262229-27262638,27263252-27263312 29 6.2
11_01_0385 + 2915532-2916482 29 6.2
10_03_0012 - 7037088-7037282,7037453-7037954,7038079-7038081,704... 29 6.2
09_02_0274 + 6611555-6611615,6612229-6612638 29 6.2
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 34.7 bits (76), Expect = 0.13
Identities = 17/58 (29%), Positives = 19/58 (32%)
Frame = +1
Query: 472 PKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKPXFXQXIPGGXXFFXXPPPGXXPP 645
P P PPPP G+ PP P P +P PPP PP
Sbjct: 535 PSPSPTAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPP 592
Score = 29.1 bits (62), Expect = 6.2
Identities = 23/77 (29%), Positives = 25/77 (32%), Gaps = 3/77 (3%)
Frame = +1
Query: 466 PXPKTQPPXXXG---PPPPXNXXNXXGHXXGXXPPXXPKPXFXQXIPGGXXFFXXPPPGX 636
P P PP PPPP G+ PP P P P G PP
Sbjct: 636 PPPPPPPPSLPNRLVPPPP---APGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPP 692
Query: 637 XPPKKXXPLXXVSXTGG 687
PP PL + T G
Sbjct: 693 PPP----PLPPANRTNG 705
Score = 28.7 bits (61), Expect = 8.3
Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 7/68 (10%)
Frame = +1
Query: 466 PXPKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKPXF-------XQXIPGGXXFFXXP 624
P P P PPPP H PP P P PG F P
Sbjct: 606 PPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPPAPGIGNKFPAP 665
Query: 625 PPGXXPPK 648
PP PP+
Sbjct: 666 PPPPPPPR 673
Score = 28.7 bits (61), Expect = 8.3
Identities = 19/62 (30%), Positives = 19/62 (30%)
Frame = +1
Query: 475 KTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKPXFXQXIPGGXXFFXXPPPGXXPPKKX 654
K PP P PP N N G PP P P P PPP K
Sbjct: 687 KGPPPPPPPPLPPANRTNGPGVPSAPPPPPPPPPANRSNGPSAPA-PPLPPPLPAAANKR 745
Query: 655 XP 660
P
Sbjct: 746 NP 747
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 34.3 bits (75), Expect = 0.17
Identities = 17/54 (31%), Positives = 19/54 (35%)
Frame = +1
Query: 484 PPXXXGPPPPXNXXNXXGHXXGXXPPXXPKPXFXQXIPGGXXFFXXPPPGXXPP 645
PP PP P N G PP P P + +PG PPP P
Sbjct: 230 PPPPPPPPKPANIAGAPGLPLPPPPPPPPGPPPREIVPGQTLLPPPPPPRPLQP 283
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 32.3 bits (70), Expect = 0.67
Identities = 28/108 (25%), Positives = 33/108 (30%)
Frame = +1
Query: 310 PPPPPXXXGFNPXGFXXSLSKFLGXGPXX*XPXXXLXXGXKXKNXGRXKKXXPXPKTQPP 489
PPPP G + L + +G P P L + P P
Sbjct: 1123 PPPPIGGLGGHQAPPAPPLPEGIGGVPPP-PPVGGLGGPPAPPPPAGFRGGTPPPNAHGG 1181
Query: 490 XXXGPPPPXNXXNXXGHXXGXXPPXXPKPXFXQXIPGGXXFFXXPPPG 633
PPPP G PP P P +PGG PPPG
Sbjct: 1182 VAPPPPPPRGHGGVGGPPT---PPGAPAPPMPPGVPGG----PPPPPG 1222
>12_02_1174 - 26696869-26698191
Length = 440
Score = 31.9 bits (69), Expect = 0.89
Identities = 22/67 (32%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Frame = +1
Query: 466 PXPKTQPPXXXGPPPPXNXXNXXGHXXGXXPP-XXPKPXFXQXIPGGXXFFXXPPPGXXP 642
P K QPP PPPP PP PKP Q P PPP P
Sbjct: 142 PPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKP---QPPPSLQPPSPPPPPPTRP 198
Query: 643 PKKXXPL 663
P P+
Sbjct: 199 PSVKPPV 205
Score = 29.1 bits (62), Expect = 6.2
Identities = 17/63 (26%), Positives = 17/63 (26%)
Frame = +1
Query: 472 PKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKPXFXQXIPGGXXFFXXPPPGXXPPKK 651
P T PP PPPP G P P P P P PP
Sbjct: 213 PPTLPPPSPPPPPPTVPPRTPGDTPAVVEPKPQPPPPPPRAPVKMPRVLEPKPSPPPPSP 272
Query: 652 XXP 660
P
Sbjct: 273 LPP 275
>08_02_1084 - 24232968-24234779
Length = 603
Score = 31.9 bits (69), Expect = 0.89
Identities = 24/72 (33%), Positives = 25/72 (34%), Gaps = 6/72 (8%)
Frame = +1
Query: 466 PXPKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKPXFXQ---XIPG-GXXFFXXPP-- 627
P P+ QPP PPPP H PP P Q IPG PP
Sbjct: 67 PLPQKQPPSQQLPPPPQQQQPPPQHSLPPPPPLPQAPPPQQQKVHIPGVAAPAPNHPPSQ 126
Query: 628 PGXXPPKKXXPL 663
P PP PL
Sbjct: 127 PNLPPPAAPAPL 138
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 31.5 bits (68), Expect = 1.2
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = +1
Query: 466 PXPKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKPXFXQXIPGGXXFFXXPPPG 633
P P P PPPP + G G PP P PG PPPG
Sbjct: 321 PPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGP-GPPPPPG 375
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.1 bits (67), Expect = 1.5
Identities = 21/60 (35%), Positives = 21/60 (35%), Gaps = 1/60 (1%)
Frame = +1
Query: 472 PKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPK-PXFXQXIPGGXXFFXXPPPGXXPPK 648
P PP PPPP G PP PK P P G PPP PPK
Sbjct: 327 PPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPP---PPK 383
>08_01_0059 - 394001-394708
Length = 235
Score = 30.3 bits (65), Expect = 2.7
Identities = 18/65 (27%), Positives = 20/65 (30%)
Frame = +1
Query: 466 PXPKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKPXFXQXIPGGXXFFXXPPPGXXPP 645
P + PP PPPP PP P+P P PPP PP
Sbjct: 6 PPRRAPPPPATPPPPPRRAPPPPSPPIRPPPPPTPRPYAP---PPPSHPLAPPPPHISPP 62
Query: 646 KKXXP 660
P
Sbjct: 63 APVPP 67
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 29.9 bits (64), Expect = 3.6
Identities = 20/65 (30%), Positives = 22/65 (33%), Gaps = 2/65 (3%)
Frame = +1
Query: 484 PPXXXGPPPPXNXXNXXGHXXGXXPPXXPKPXFXQXIPGGXXFFXXPPP--GXXPPKKXX 657
PP PPPP + PP P P F P + PPP PP
Sbjct: 374 PPNPPPPPPPMSPSCLL-------PPIIPAPTFTYSSPPPPPLYYPPPPDISPSPPPSVT 426
Query: 658 PLXXV 672
PL V
Sbjct: 427 PLPPV 431
>03_03_0259 + 15937549-15938307,15938393-15938767
Length = 377
Score = 29.9 bits (64), Expect = 3.6
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +1
Query: 310 PPPPPXXXGFNPXGFXXSLSKFLGXGP 390
PPPPP G++P F S + G P
Sbjct: 333 PPPPPPPHGYDPNAFFHSQYAYFGMQP 359
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.5 bits (63), Expect = 4.7
Identities = 19/65 (29%), Positives = 21/65 (32%)
Frame = +1
Query: 466 PXPKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKPXFXQXIPGGXXFFXXPPPGXXPP 645
P P + PP PPPP + PP P P P PPP PP
Sbjct: 1159 PLPPSPPPATPPPPPPLSP------SLPPPPPPPPLPSGPPPQPAPPPLPIQPPPIPPPP 1212
Query: 646 KKXXP 660
P
Sbjct: 1213 VPSSP 1217
>11_07_0007 - 27262229-27262638,27263252-27263312
Length = 156
Score = 29.1 bits (62), Expect = 6.2
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = -3
Query: 644 GGXFPGGGXXKKXXPPGXFCXXXGFGXXGGXXPKXCPXXFXXXXGGGGPXXXGGWVLGXG 465
GG PGGG PG C G G + GGGG GG + G G
Sbjct: 66 GGGIPGGGQSGGIGAPGGGCGGAGHGGGSAGGGRGGGAGGSHRGGGGG---RGGGLSGRG 122
>11_01_0385 + 2915532-2916482
Length = 316
Score = 29.1 bits (62), Expect = 6.2
Identities = 19/66 (28%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Frame = +1
Query: 466 PXPKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKPXFXQXIPGGXXFFXXPP-PGXXP 642
P PP PP G+ PP P P PGG + PP P P
Sbjct: 174 PGNNQWPPLPPFNQPPTPEWPHPGNKWPPLPPFHPPPTPAWPHPGGNKWPPLPPFPSHPP 233
Query: 643 PKKXXP 660
P P
Sbjct: 234 PTPAWP 239
>10_03_0012 -
7037088-7037282,7037453-7037954,7038079-7038081,
7040633-7041213
Length = 426
Score = 29.1 bits (62), Expect = 6.2
Identities = 20/79 (25%), Positives = 25/79 (31%), Gaps = 5/79 (6%)
Frame = +1
Query: 424 GXKXKNXGRXKKXXPXPKTQPPXXXGPPPPXNXXNXXGHXX-----GXXPPXXPKPXFXQ 588
G + +N G + T PP PPP + PP P P Q
Sbjct: 9 GHRRRNNGHGRHHHHGQPTAPP----PPPQQQQQEVAPNRYVFAAASPYPPQYPNPNLPQ 64
Query: 589 XIPGGXXFFXXPPPGXXPP 645
P F+ PPP P
Sbjct: 65 YYPQYGNFYPPPPPSMPGP 83
>09_02_0274 + 6611555-6611615,6612229-6612638
Length = 156
Score = 29.1 bits (62), Expect = 6.2
Identities = 19/60 (31%), Positives = 21/60 (35%)
Frame = -3
Query: 644 GGXFPGGGXXKKXXPPGXFCXXXGFGXXGGXXPKXCPXXFXXXXGGGGPXXXGGWVLGXG 465
GG PGGG PG C G G + GGGG GG + G G
Sbjct: 66 GGGIPGGGQSGGIGAPGGGCGGAGHGGGSAGGGRGGGAGGSHRGGGGG---RGGGLSGRG 122
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,970,580
Number of Sequences: 37544
Number of extensions: 324815
Number of successful extensions: 1011
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 607
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3152842920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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