Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_E02
(1063 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X17568-1|CAB57868.1| 240|Homo sapiens snRNP B' protein protein. 35 0.44
X17567-1|CAB57867.1| 231|Homo sapiens snRNP B protein protein. 35 0.44
X15893-1|CAA33902.1| 231|Homo sapiens protein ( Human B cod gen... 35 0.44
M34082-1|AAA36579.1| 233|Homo sapiens protein ( Human small nuc... 35 0.44
M34081-1|AAA36578.1| 224|Homo sapiens protein ( Human small nuc... 35 0.44
CR456969-1|CAG33250.1| 240|Homo sapiens SNRPB protein. 35 0.44
BC080516-1|AAH80516.1| 231|Homo sapiens small nuclear ribonucle... 35 0.44
BC003530-1|AAH03530.1| 234|Homo sapiens SNRPB protein protein. 35 0.44
AY742712-1|AAU89981.1| 231|Homo sapiens small nuclear ribonucle... 35 0.44
AL049650-8|CAB46715.1| 240|Homo sapiens small nuclear ribonucle... 35 0.44
AL049650-7|CAB46714.1| 231|Homo sapiens small nuclear ribonucle... 35 0.44
BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongatio... 32 3.1
AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription ... 32 3.1
AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongatio... 32 3.1
BC054516-1|AAH54516.1| 666|Homo sapiens amyloid beta (A4) precu... 32 4.1
AL160287-2|CAH70339.1| 666|Homo sapiens amyloid beta (A4) precu... 32 4.1
AB085852-1|BAC41256.1| 666|Homo sapiens proline-rich protein 73... 32 4.1
Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein. 31 7.1
Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein. 31 7.1
L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1... 31 7.1
D26120-2|BAA05117.1| 623|Homo sapiens ZFM1 protein protein. 31 7.1
D26120-1|BAA05116.1| 548|Homo sapiens ZFM1 protein alternativel... 31 7.1
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 31 7.1
BC020217-1|AAH20217.1| 548|Homo sapiens splicing factor 1 protein. 31 7.1
BC008724-1|AAH08724.1| 548|Homo sapiens splicing factor 1 protein. 31 7.1
BC008080-1|AAH08080.1| 548|Homo sapiens splicing factor 1 protein. 31 7.1
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 31 7.1
BC000773-1|AAH00773.1| 265|Homo sapiens Similar to zinc finger ... 31 7.1
>X17568-1|CAB57868.1| 240|Homo sapiens snRNP B' protein protein.
Length = 240
Score = 35.1 bits (77), Expect = 0.44
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Frame = +1
Query: 472 PKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKPXFXQXIPGGXXF-FXXPPPGXXPP 645
P PP GPPPP G P P IP G PPPG PP
Sbjct: 165 PTQYPPGRGGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRPP 223
>X17567-1|CAB57867.1| 231|Homo sapiens snRNP B protein protein.
Length = 231
Score = 35.1 bits (77), Expect = 0.44
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Frame = +1
Query: 472 PKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKPXFXQXIPGGXXF-FXXPPPGXXPP 645
P PP GPPPP G P P IP G PPPG PP
Sbjct: 165 PTQYPPGRGGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRPP 223
>X15893-1|CAA33902.1| 231|Homo sapiens protein ( Human B cod gene
for B/B' snRNP associated protein. ).
Length = 231
Score = 35.1 bits (77), Expect = 0.44
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Frame = +1
Query: 472 PKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKPXFXQXIPGGXXF-FXXPPPGXXPP 645
P PP GPPPP G P P IP G PPPG PP
Sbjct: 165 PTQYPPGRGGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRPP 223
>M34082-1|AAA36579.1| 233|Homo sapiens protein ( Human small
nuclear ribonucleoprotein particle SmB' mRNA, 3' end. ).
Length = 233
Score = 35.1 bits (77), Expect = 0.44
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Frame = +1
Query: 472 PKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKPXFXQXIPGGXXF-FXXPPPGXXPP 645
P PP GPPPP G P P IP G PPPG PP
Sbjct: 158 PTQYPPGRGGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRPP 216
>M34081-1|AAA36578.1| 224|Homo sapiens protein ( Human small
nuclear ribonucleoprotein particle SmB mRNA, 3' end. ).
Length = 224
Score = 35.1 bits (77), Expect = 0.44
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Frame = +1
Query: 472 PKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKPXFXQXIPGGXXF-FXXPPPGXXPP 645
P PP GPPPP G P P IP G PPPG PP
Sbjct: 158 PTQYPPGRGGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRPP 216
>CR456969-1|CAG33250.1| 240|Homo sapiens SNRPB protein.
Length = 240
Score = 35.1 bits (77), Expect = 0.44
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Frame = +1
Query: 472 PKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKPXFXQXIPGGXXF-FXXPPPGXXPP 645
P PP GPPPP G P P IP G PPPG PP
Sbjct: 165 PTQYPPGRGGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRPP 223
>BC080516-1|AAH80516.1| 231|Homo sapiens small nuclear
ribonucleoprotein polypeptides B and B1 protein.
Length = 231
Score = 35.1 bits (77), Expect = 0.44
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Frame = +1
Query: 472 PKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKPXFXQXIPGGXXF-FXXPPPGXXPP 645
P PP GPPPP G P P IP G PPPG PP
Sbjct: 165 PTQYPPGRGGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRPP 223
>BC003530-1|AAH03530.1| 234|Homo sapiens SNRPB protein protein.
Length = 234
Score = 35.1 bits (77), Expect = 0.44
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Frame = +1
Query: 472 PKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKPXFXQXIPGGXXF-FXXPPPGXXPP 645
P PP GPPPP G P P IP G PPPG PP
Sbjct: 165 PTQYPPGRGGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRPP 223
>AY742712-1|AAU89981.1| 231|Homo sapiens small nuclear
ribonucleoprotein polypeptide B protein.
Length = 231
Score = 35.1 bits (77), Expect = 0.44
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Frame = +1
Query: 472 PKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKPXFXQXIPGGXXF-FXXPPPGXXPP 645
P PP GPPPP G P P IP G PPPG PP
Sbjct: 165 PTQYPPGRGGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRPP 223
>AL049650-8|CAB46715.1| 240|Homo sapiens small nuclear
ribonucleoprotein polypeptides B and B1 protein.
Length = 240
Score = 35.1 bits (77), Expect = 0.44
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Frame = +1
Query: 472 PKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKPXFXQXIPGGXXF-FXXPPPGXXPP 645
P PP GPPPP G P P IP G PPPG PP
Sbjct: 165 PTQYPPGRGGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRPP 223
>AL049650-7|CAB46714.1| 231|Homo sapiens small nuclear
ribonucleoprotein polypeptides B and B1 protein.
Length = 231
Score = 35.1 bits (77), Expect = 0.44
Identities = 20/59 (33%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Frame = +1
Query: 472 PKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKPXFXQXIPGGXXF-FXXPPPGXXPP 645
P PP GPPPP G P P IP G PPPG PP
Sbjct: 165 PTQYPPGRGGPPPPMGRGAPPPGMMGPPPGMRPPMGPPMGIPPGRGTPMGMPPPGMRPP 223
>BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongation
regulator 1 protein.
Length = 1077
Score = 32.3 bits (70), Expect = 3.1
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = +1
Query: 499 GPPPPXNXXNXXGHXXGXXPPXXPKPXFXQXIPGGXXFFXXPPPGXXPPKKXXP 660
GPPP G G PP P+P F + P PPPG PP P
Sbjct: 42 GPPPLMRPPPPFGMMRGPPPP--PRPPFGRP-PFDPNMPPMPPPGGIPPPMGPP 92
>AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription
factor CA150 protein.
Length = 1098
Score = 32.3 bits (70), Expect = 3.1
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = +1
Query: 499 GPPPPXNXXNXXGHXXGXXPPXXPKPXFXQXIPGGXXFFXXPPPGXXPPKKXXP 660
GPPP G G PP P+P F + P PPPG PP P
Sbjct: 42 GPPPLMRPPPPFGMMRGPPPP--PRPPFGRP-PFDPNMPPMPPPGGIPPPMGPP 92
>AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongation
regulator 1 variant protein.
Length = 1081
Score = 32.3 bits (70), Expect = 3.1
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = +1
Query: 499 GPPPPXNXXNXXGHXXGXXPPXXPKPXFXQXIPGGXXFFXXPPPGXXPPKKXXP 660
GPPP G G PP P+P F + P PPPG PP P
Sbjct: 46 GPPPLMRPPPPFGMMRGPPPP--PRPPFGRP-PFDPNMPPMPPPGGIPPPMGPP 96
>BC054516-1|AAH54516.1| 666|Homo sapiens amyloid beta (A4)
precursor protein-binding, family B, member 1
interacting pro protein.
Length = 666
Score = 31.9 bits (69), Expect = 4.1
Identities = 24/92 (26%), Positives = 30/92 (32%), Gaps = 3/92 (3%)
Frame = +1
Query: 310 PPPPPXXXGFNPXGFXXS--LSKFLGXGPXX*XPXXXLXXGXKXKNXGRXKKXXPXPK-T 480
PPPPP + G + +K G G P L + P P
Sbjct: 517 PPPPPVRRSSDTSGSPATPLKAKGTGGGGLPAPPDDFLPPPPPPPPLDDPELPPPPPDFM 576
Query: 481 QPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKP 576
+PP PPPP + G PP P P
Sbjct: 577 EPPPDFVPPPPPSYAGIAGSELPPPPPPPPAP 608
>AL160287-2|CAH70339.1| 666|Homo sapiens amyloid beta (A4)
precursor protein-binding, family B, member 1
interacting pro protein.
Length = 666
Score = 31.9 bits (69), Expect = 4.1
Identities = 24/92 (26%), Positives = 30/92 (32%), Gaps = 3/92 (3%)
Frame = +1
Query: 310 PPPPPXXXGFNPXGFXXS--LSKFLGXGPXX*XPXXXLXXGXKXKNXGRXKKXXPXPK-T 480
PPPPP + G + +K G G P L + P P
Sbjct: 517 PPPPPVRRSSDTSGSPATPLKAKGTGGGGLPAPPDDFLPPPPPPPPLDDPELPPPPPDFM 576
Query: 481 QPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKP 576
+PP PPPP + G PP P P
Sbjct: 577 EPPPDFVPPPPPSYAGIAGSELPPPPPPPPAP 608
>AB085852-1|BAC41256.1| 666|Homo sapiens proline-rich protein 73
protein.
Length = 666
Score = 31.9 bits (69), Expect = 4.1
Identities = 24/92 (26%), Positives = 30/92 (32%), Gaps = 3/92 (3%)
Frame = +1
Query: 310 PPPPPXXXGFNPXGFXXS--LSKFLGXGPXX*XPXXXLXXGXKXKNXGRXKKXXPXPK-T 480
PPPPP + G + +K G G P L + P P
Sbjct: 517 PPPPPVRRSSDTSGSPATPLKAKGTGGGGLPAPPDDFLPPPPPPPPLDDPELPPPPPDFM 576
Query: 481 QPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKP 576
+PP PPPP + G PP P P
Sbjct: 577 EPPPDFVPPPPPSYAGIAGSELPPPPPPPPAP 608
>Y08766-1|CAA70019.1| 638|Homo sapiens SF1-Bo isoform protein.
Length = 638
Score = 31.1 bits (67), Expect = 7.1
Identities = 25/95 (26%), Positives = 33/95 (34%), Gaps = 6/95 (6%)
Frame = +1
Query: 310 PPPPPXXXGFNPXGFXXS--LSKFLGXGPXX*XPXXXLXXGXKXKNXGRXKKXXPX---- 471
PPPPP G +P G + ++LG P + G + G+ P
Sbjct: 427 PPPPPMNQGPHPPGHHGPPPMDQYLGSTP--------VGSGVYRLHQGKGMMPPPPMGMM 478
Query: 472 PKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKP 576
P PP PPPP + PP P P
Sbjct: 479 PPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPP 513
>Y08765-1|CAA70018.1| 639|Homo sapiens SF1-Hl1 isoform protein.
Length = 639
Score = 31.1 bits (67), Expect = 7.1
Identities = 25/95 (26%), Positives = 33/95 (34%), Gaps = 6/95 (6%)
Frame = +1
Query: 310 PPPPPXXXGFNPXGFXXS--LSKFLGXGPXX*XPXXXLXXGXKXKNXGRXKKXXPX---- 471
PPPPP G +P G + ++LG P + G + G+ P
Sbjct: 427 PPPPPMNQGPHPPGHHGPPPMDQYLGSTP--------VGSGVYRLHQGKGMMPPPPMGMM 478
Query: 472 PKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKP 576
P PP PPPP + PP P P
Sbjct: 479 PPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPP 513
>L49380-1|AAB04033.1| 639|Homo sapiens transcription factor ZFM1
protein.
Length = 639
Score = 31.1 bits (67), Expect = 7.1
Identities = 25/95 (26%), Positives = 33/95 (34%), Gaps = 6/95 (6%)
Frame = +1
Query: 310 PPPPPXXXGFNPXGFXXS--LSKFLGXGPXX*XPXXXLXXGXKXKNXGRXKKXXPX---- 471
PPPPP G +P G + ++LG P + G + G+ P
Sbjct: 427 PPPPPMNQGPHPPGHHGPPPMDQYLGSTP--------VGSGVYRLHQGKGMMPPPPMGMM 478
Query: 472 PKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKP 576
P PP PPPP + PP P P
Sbjct: 479 PPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPP 513
>D26120-2|BAA05117.1| 623|Homo sapiens ZFM1 protein protein.
Length = 623
Score = 31.1 bits (67), Expect = 7.1
Identities = 25/95 (26%), Positives = 33/95 (34%), Gaps = 6/95 (6%)
Frame = +1
Query: 310 PPPPPXXXGFNPXGFXXS--LSKFLGXGPXX*XPXXXLXXGXKXKNXGRXKKXXPX---- 471
PPPPP G +P G + ++LG P + G + G+ P
Sbjct: 427 PPPPPMNQGPHPPGHHGPPPMDQYLGSTP--------VGSGVYRLHQGKGMMPPPPMGMM 478
Query: 472 PKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKP 576
P PP PPPP + PP P P
Sbjct: 479 PPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPP 513
>D26120-1|BAA05116.1| 548|Homo sapiens ZFM1 protein alternatively
spliced product protein.
Length = 548
Score = 31.1 bits (67), Expect = 7.1
Identities = 25/95 (26%), Positives = 33/95 (34%), Gaps = 6/95 (6%)
Frame = +1
Query: 310 PPPPPXXXGFNPXGFXXS--LSKFLGXGPXX*XPXXXLXXGXKXKNXGRXKKXXPX---- 471
PPPPP G +P G + ++LG P + G + G+ P
Sbjct: 427 PPPPPMNQGPHPPGHHGPPPMDQYLGSTP--------VGSGVYRLHQGKGMMPPPPMGMM 478
Query: 472 PKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKP 576
P PP PPPP + PP P P
Sbjct: 479 PPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPP 513
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 31.1 bits (67), Expect = 7.1
Identities = 25/95 (26%), Positives = 33/95 (34%), Gaps = 6/95 (6%)
Frame = +1
Query: 310 PPPPPXXXGFNPXGFXXS--LSKFLGXGPXX*XPXXXLXXGXKXKNXGRXKKXXPX---- 471
PPPPP G +P G + ++LG P + G + G+ P
Sbjct: 552 PPPPPMNQGPHPPGHHGPPPMDQYLGSTP--------VGSGVYRLHQGKGMMPPPPMGMM 603
Query: 472 PKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKP 576
P PP PPPP + PP P P
Sbjct: 604 PPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPP 638
>BC020217-1|AAH20217.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 31.1 bits (67), Expect = 7.1
Identities = 25/95 (26%), Positives = 33/95 (34%), Gaps = 6/95 (6%)
Frame = +1
Query: 310 PPPPPXXXGFNPXGFXXS--LSKFLGXGPXX*XPXXXLXXGXKXKNXGRXKKXXPX---- 471
PPPPP G +P G + ++LG P + G + G+ P
Sbjct: 427 PPPPPMNQGPHPPGHHGPPPMDQYLGSTP--------VGSGVYRLHQGKGMMPPPPMGMM 478
Query: 472 PKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKP 576
P PP PPPP + PP P P
Sbjct: 479 PPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPP 513
>BC008724-1|AAH08724.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 31.1 bits (67), Expect = 7.1
Identities = 25/95 (26%), Positives = 33/95 (34%), Gaps = 6/95 (6%)
Frame = +1
Query: 310 PPPPPXXXGFNPXGFXXS--LSKFLGXGPXX*XPXXXLXXGXKXKNXGRXKKXXPX---- 471
PPPPP G +P G + ++LG P + G + G+ P
Sbjct: 427 PPPPPMNQGPHPPGHHGPPPMDQYLGSTP--------VGSGVYRLHQGKGMMPPPPMGMM 478
Query: 472 PKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKP 576
P PP PPPP + PP P P
Sbjct: 479 PPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPP 513
>BC008080-1|AAH08080.1| 548|Homo sapiens splicing factor 1 protein.
Length = 548
Score = 31.1 bits (67), Expect = 7.1
Identities = 25/95 (26%), Positives = 33/95 (34%), Gaps = 6/95 (6%)
Frame = +1
Query: 310 PPPPPXXXGFNPXGFXXS--LSKFLGXGPXX*XPXXXLXXGXKXKNXGRXKKXXPX---- 471
PPPPP G +P G + ++LG P + G + G+ P
Sbjct: 427 PPPPPMNQGPHPPGHHGPPPMDQYLGSTP--------VGSGVYRLHQGKGMMPPPPMGMM 478
Query: 472 PKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKP 576
P PP PPPP + PP P P
Sbjct: 479 PPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPP 513
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 31.1 bits (67), Expect = 7.1
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = +1
Query: 472 PKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKPXFXQXIPGGXXFFXXPPPGXXPP 645
P PP GPPPP G PP P P PPPG PP
Sbjct: 233 PPGPPPPQQGPPPP----------PGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPP 280
>BC000773-1|AAH00773.1| 265|Homo sapiens Similar to zinc finger
protein 162 protein.
Length = 265
Score = 31.1 bits (67), Expect = 7.1
Identities = 25/95 (26%), Positives = 33/95 (34%), Gaps = 6/95 (6%)
Frame = +1
Query: 310 PPPPPXXXGFNPXGFXXS--LSKFLGXGPXX*XPXXXLXXGXKXKNXGRXKKXXPX---- 471
PPPPP G +P G + ++LG P + G + G+ P
Sbjct: 53 PPPPPMNQGPHPPGHHGPPPMDQYLGSTP--------VGSGVYRLHQGKGMMPPPPMGMM 104
Query: 472 PKTQPPXXXGPPPPXNXXNXXGHXXGXXPPXXPKP 576
P PP PPPP + PP P P
Sbjct: 105 PPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPP 139
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,302,229
Number of Sequences: 237096
Number of extensions: 1774519
Number of successful extensions: 4697
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 2537
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4223
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 14484231412
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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