Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_D15
(810 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyce... 107 1e-24
SPBC17G9.12c |||conserved fungal protein|Schizosaccharomyces pom... 28 1.4
SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase ... 28 1.8
SPCC18B5.03 |wee1||dual specificity protein kinase Wee1|Schizosa... 27 2.4
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 27 4.2
SPCC63.05 |||TAP42 family protein |Schizosaccharomyces pombe|chr... 26 5.5
SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr ... 26 5.5
>SPAC15A10.04c |zpr1||zinc finger protein Zpr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 459
Score = 107 bits (258), Expect = 1e-24
Identities = 51/133 (38%), Positives = 82/133 (61%)
Frame = +3
Query: 204 LLTRIPHYKNVVIMSFSCEECGYQNNEIQPGGEYEELGVRWKLRVESQQDLNRQVVKSDY 383
LLT IP+++ VV+MSF C CG++N ++Q + G + VE ++DLNR VVKS
Sbjct: 50 LLTVIPYFREVVLMSFECPHCGFKNAQVQHAETIQPEGSKITFHVEDKEDLNRTVVKSQE 109
Query: 384 TSIRIPELDFEIAAQSQKGEVTTVEGIISRAITGLNQDQESRRSQHPDAAAKIDEFVSKL 563
+ IPE+ EI + G++TT+EGI+S + L+++QESR+ P +I+ F+ K+
Sbjct: 110 AIVSIPEIQLEI--PGRLGQLTTIEGILSNVVDDLSKEQESRKESAPQLYDQINAFIEKV 167
Query: 564 QALKDLSTPWDTT 602
+L+ S P+ T
Sbjct: 168 NSLRSGSVPFTIT 180
Score = 90.2 bits (214), Expect = 3e-19
Identities = 44/129 (34%), Positives = 75/129 (58%), Gaps = 2/129 (1%)
Frame = +3
Query: 207 LTRIPHYKNVVIMSFSCEECGYQNNEIQPGGEYEELGVRWKLRVESQQDLNRQVVKSDYT 386
L IPH+K V+IMS C+ CGY++NE++ GGE G + L+V +DL+R ++KS+
Sbjct: 272 LLDIPHFKEVIIMSTVCDRCGYRSNEVKTGGEIPPKGRKITLKVMDAEDLSRDILKSETA 331
Query: 387 SIRIPELDFEIAAQSQKGEVTTVEGIISRAITGL--NQDQESRRSQHPDAAAKIDEFVSK 560
S++IPEL ++ + G TT+EG++++ L + S P+ A +F+
Sbjct: 332 SLKIPELGLDLFPGTLGGRFTTIEGLLAQVYDELYGRVFSQETDSMTPEQVANWQQFLCN 391
Query: 561 LQALKDLST 587
L A ++ +T
Sbjct: 392 LTAAREGAT 400
Score = 29.1 bits (62), Expect = 0.78
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +2
Query: 122 TAEDPDPE-VTEIESFCINCHSNGMTR 199
TAED + V E+ES C+ C NG T+
Sbjct: 22 TAEDREGNGVQEVESLCMECGKNGTTK 48
Score = 29.1 bits (62), Expect = 0.78
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 595 TLQLEDISGNCFIENPQMPKKD-PRCERTDFKRSKAXNHQLGIFMHDEVQXXLT 753
T+ ++DI+GN +IE P +D R + +KR+ N +LG+ D+ + T
Sbjct: 178 TITVDDITGNSWIE--MKPGRDGDRWSQVSYKRTLEQNTKLGLVDTDQPEDVKT 229
Score = 29.1 bits (62), Expect = 0.78
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +1
Query: 595 TLQLEDISGNCFIENPQMPKKDPRCERTDFKRSKAXNHQLGI 720
TL L+D +++N P DP +++RS N +LG+
Sbjct: 403 TLILDDPLSQSYLQNYYAPDPDPNMTIEEYERSFQVNEELGL 444
>SPBC17G9.12c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 274
Score = 28.3 bits (60), Expect = 1.4
Identities = 17/78 (21%), Positives = 32/78 (41%)
Frame = +3
Query: 303 YEELGVRWKLRVESQQDLNRQVVKSDYTSIRIPELDFEIAAQSQKGEVTTVEGIISRAIT 482
+ L V W RV Q L+ + +D + + DF+ + + G + S +
Sbjct: 120 FHVLSVNWSARVIEQTLLHHTDLTADLLCVHANDFDFDTSTNTTNGRI-LARNASSLLMN 178
Query: 483 GLNQDQESRRSQHPDAAA 536
++ +E RR DA +
Sbjct: 179 STDKVREFRRIVQTDAVS 196
>SPAC19G12.14 |its3||1-phosphatidylinositol-4-phosphate 5-kinase
Its3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 742
Score = 27.9 bits (59), Expect = 1.8
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 601 QLEDISGNCFIENPQMPKKDPRCERTDFKRS 693
Q D++GN F N KKD + DF+R+
Sbjct: 25 QAVDLNGNAFAPNGTFQKKDLISHKNDFERT 55
>SPCC18B5.03 |wee1||dual specificity protein kinase
Wee1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 877
Score = 27.5 bits (58), Expect = 2.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 105 QCSETLQPRTPTQKSRKSNHF 167
Q S+ + P TP QK RK N+F
Sbjct: 184 QSSQHIPPSTPAQKLRKKNNF 204
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 26.6 bits (56), Expect = 4.2
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 327 KLRVESQQDLNRQVVKSDYTSIRIPELDFEIAAQSQKGEVTTVEGIISR 473
KL +++ + ++K +TS I +LDF S + E V+ I SR
Sbjct: 371 KLSWDAEDPHRKDLIKKAFTSQDIEDLDFSAYIASSESEDEDVDVIRSR 419
>SPCC63.05 |||TAP42 family protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 323
Score = 26.2 bits (55), Expect = 5.5
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 32 IKTYALRYSFFDFRLQKCV 88
IKT LRY D+ L KCV
Sbjct: 56 IKTSELRYLMIDYELAKCV 74
>SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 384
Score = 26.2 bits (55), Expect = 5.5
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2
Query: 572 EGSVYPLGHYSLRI*AGIASSRTPKCRRRILAVNG 676
+G + PLG++ + IA RTPK + + G
Sbjct: 59 DGDIIPLGYFQNSLGKFIAKRRTPKVQNHYSDIGG 93
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,318,436
Number of Sequences: 5004
Number of extensions: 68252
Number of successful extensions: 204
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 203
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 394431430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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