Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_FL5_D15
         (810 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    25   1.1  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    24   1.9  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           24   1.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   4.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   4.4  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   7.7  

>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -3

Query: 130 LGCKVSEHWFEVGXNTF-LETKIEETI 53
           +GC  SEH+FE G N   +  K  ET+
Sbjct: 330 IGCWNSEHFFEYGGNNIEIIVKDPETL 356


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 540 IDEFVSKLQALKDLSTPWDTTA 605
           + EF++K +ALK L   WD  A
Sbjct: 347 VAEFIAKPEALKLLDENWDLIA 368


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 540 IDEFVSKLQALKDLSTPWDTTA 605
           + EF++K +ALK L   WD  A
Sbjct: 347 VAEFIAKPEALKLLDENWDLIA 368


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +3

Query: 297 GEYEELGVRWKLRVESQQDLNRQVVKSD 380
           GEYEEL  R   ++ S   L  Q VK D
Sbjct: 752 GEYEELRERAYTKILSNGTLLLQHVKED 779


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +3

Query: 297 GEYEELGVRWKLRVESQQDLNRQVVKSD 380
           GEYEEL  R   ++ S   L  Q VK D
Sbjct: 748 GEYEELRERAYTKILSNGTLLLQHVKED 775


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.8 bits (44), Expect = 7.7
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 367 WSKVTTPASGYPSWTLR*QHRVRKG 441
           W K  TP +  P+W +    RVR G
Sbjct: 343 WIK-GTPQNNVPNWVMGNHDRVRVG 366


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,584
Number of Sequences: 438
Number of extensions: 4945
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)