Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_D14
(841 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 38 1e-04
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 37 2e-04
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 37 3e-04
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 36 6e-04
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 35 0.001
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 35 0.001
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 35 0.001
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 33 0.002
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 33 0.002
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 33 0.003
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 33 0.003
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 33 0.003
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 33 0.004
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 31 0.010
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 31 0.010
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 31 0.013
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 30 0.023
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 30 0.031
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.053
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 29 0.053
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 29 0.053
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.071
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 29 0.071
DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated... 26 0.38
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 26 0.38
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 25 0.87
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 25 0.87
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 25 0.87
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 25 0.87
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 0.87
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 2.7
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 2.7
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 6.1
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 22 8.1
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 37.9 bits (84), Expect = 1e-04
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = +1
Query: 280 VSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISMQLDXWP 447
V S+ +WRPD+VL N A G+Y + +A V +G V W + S+ ++ +P
Sbjct: 105 VPSDHIWRPDIVLYNNA---DGNYEVTLMTKATVYYSGLVVWQPPAVYKSSCSIDVEFFP 161
Query: 448 NDMXTCTFQV 477
D+ TC ++
Sbjct: 162 YDVQTCVLKL 171
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 37.1 bits (82), Expect = 2e-04
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 280 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 456
V S+ +WRPD+VL NA A +A + + G V W + + ++ +P D
Sbjct: 105 VPSDHIWRPDIVLYNNADGNFEVTLATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDE 164
Query: 457 XTCTFQ 474
TC +
Sbjct: 165 QTCVLK 170
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 36.7 bits (81), Expect = 3e-04
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1
Query: 280 VSSERLWRPDVVLL-NAAATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 456
V S+ +WRPD+VL NA A +A ++ G V W + + ++ +P D
Sbjct: 101 VPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDE 160
Query: 457 XTCTFQ 474
TC +
Sbjct: 161 QTCVMK 166
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 35.5 bits (78), Expect = 6e-04
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +1
Query: 289 ERLWRPDVVLLNAAATTAGDYALRAR----VSNNGSVSWIKRLDISTPISMQLDXWPNDM 456
+++W+PD+VL N A G+Y +R + + NG V W+ + ++ + +P D
Sbjct: 106 DKVWKPDIVLFNNA---DGNYEVRYKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQ 162
Query: 457 XTC 465
TC
Sbjct: 163 QTC 165
Score = 23.8 bits (49), Expect = 2.0
Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Frame = +3
Query: 129 KIVVNLTL-HLRHANIRESESTVRILADLQMNWIDKRLSWNA---GGMGLQHL 275
K+ VN L ++ N+ E ++ L+ W D +L W+ GG+G+ L
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRL 103
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 34.7 bits (76), Expect = 0.001
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +1
Query: 289 ERLWRPDVVLLNAAATTAGDYAL---RARVSNNGSVSWIKRLDISTPISMQLDXWPNDMX 459
ER+WRPD N + + R+S +G + + RL I M+L +P D
Sbjct: 115 ERIWRPDTYFYNGKHSYVHTITVPNKLLRISQDGDILYSMRLTIKAKCPMELRNFPMDRQ 174
Query: 460 TC 465
+C
Sbjct: 175 SC 176
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 34.7 bits (76), Expect = 0.001
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Frame = +1
Query: 286 SERLWRPDVVLLNAAATTAGDYALR---ARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 456
+E++W PD N + D R R+S +GSV++ R + M L +P D
Sbjct: 113 AEKIWVPDTFFANDKNSFLHDVTERNKLVRLSGDGSVTYGMRFTTTLACMMDLHYYPLDS 172
Query: 457 XTCTFQV 477
CT ++
Sbjct: 173 QNCTVEI 179
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 34.7 bits (76), Expect = 0.001
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +1
Query: 256 EWGCSTWL-VSSERLWRPDVVLLNAAATTAGDYAL-RARVSNNGSVSWIKRLDISTPISM 429
E+G T L V SE +W PD+VL N A G + +A + G V W + +
Sbjct: 88 EYGGVTELYVPSEHIWLPDIVLYNNADGEYGVTTMTKAILHYTGKVLWTPPAIFKSSCEI 147
Query: 430 QLDXWPNDMXTC 465
+ +P D TC
Sbjct: 148 DVRYFPFDQQTC 159
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 33.5 bits (73), Expect = 0.002
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Frame = +3
Query: 51 CENATSLSLMIDS---LLATYDRESPPDSKIV--VNLTLHLRHANIRESESTVRILADLQ 215
C++ TS S + L YDR+ P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 216 MNWIDKRLSWNA 251
+ W L+W +
Sbjct: 88 LMWEQSHLTWKS 99
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 33.5 bits (73), Expect = 0.002
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = +1
Query: 262 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 429
G V SE +W PD+VL N A G+Y + +A + G VSW + +
Sbjct: 104 GVEMLYVPSENIWLPDIVLYNNA---DGNYEVTLMTKATLKYTGDVSWKPPAIYKSSCEI 160
Query: 430 QLDXWPNDMXTC 465
++ +P D +C
Sbjct: 161 NVEYFPFDEQSC 172
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 33.1 bits (72), Expect = 0.003
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 4/72 (5%)
Frame = +1
Query: 262 GCSTWLVSSERLWRPDVVLLNAAATTAGDYAL----RARVSNNGSVSWIKRLDISTPISM 429
G T V SE +W PD+VL N A G+Y + +A + + G V W + +
Sbjct: 91 GVDTLHVPSEHIWLPDIVLYNNA---DGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEI 147
Query: 430 QLDXWPNDMXTC 465
++ +P D TC
Sbjct: 148 DVEYFPFDEQTC 159
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 33.1 bits (72), Expect = 0.003
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = +1
Query: 280 VSSERLWRPDVVLLNAAATTAGDYALRAR--VSNNGSVSWIKRLDISTPISMQLDXWPND 453
V R+WRPD +L N A + VS+ G V W+ + + ++ +P D
Sbjct: 82 VPYNRVWRPDTILYNNADPQYSSAVINTNVIVSHTGEVVWLSHGIFRSSCDIDVEFFPFD 141
Query: 454 MXTCTFQ 474
C +
Sbjct: 142 EQRCVLK 148
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 33.1 bits (72), Expect = 0.003
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 280 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 456
+ RLW+PDV++ N+A G Y V NNG+ ++ + + + +P D
Sbjct: 100 IPPHRLWKPDVLMYNSADEGFDGTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDD 159
Query: 457 XTC 465
C
Sbjct: 160 QRC 162
Score = 22.2 bits (45), Expect = 6.1
Identities = 18/90 (20%), Positives = 39/90 (43%), Gaps = 5/90 (5%)
Frame = +3
Query: 9 YXFLLTCAIASAAECENATSLSLMIDSLLATYD-RESPPDSK---IVVNLTLHLRHA-NI 173
+ + A+A++ + +++ LL TY+ E P ++ +V++ L L ++
Sbjct: 4 WTLMAAIALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDV 63
Query: 174 RESESTVRILADLQMNWIDKRLSWNAGGMG 263
E + L++ W D + WN G
Sbjct: 64 DEKNQLLITNLWLKLEWNDVNMRWNVSDYG 93
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 32.7 bits (71), Expect = 0.004
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +3
Query: 57 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLHLRHAN-IRESESTVRILADLQMNW 224
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 225 IDKRLSWNAG 254
+D+RL++ G
Sbjct: 62 VDRRLAFQGG 71
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 31.5 bits (68), Expect = 0.010
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 280 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 456
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 457 XTC 465
C
Sbjct: 191 QHC 193
Score = 24.6 bits (51), Expect = 1.1
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +3
Query: 78 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 242
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 243 WNAGGMG 263
WN G
Sbjct: 118 WNESEYG 124
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 31.5 bits (68), Expect = 0.010
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 280 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 456
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 131 ITPNKLWKPDILMYNSADEGFDGTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 190
Query: 457 XTC 465
C
Sbjct: 191 QHC 193
Score = 24.6 bits (51), Expect = 1.1
Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Frame = +3
Query: 78 MIDSLLATYDRESPP----DSKIVVNLTLHLRHA-NIRESESTVRILADLQMNWIDKRLS 242
+++ LL++Y+ P + V + L+ ++ E + A L++ W+D L
Sbjct: 58 LLNELLSSYNTLERPVANESEPLEVKFGITLQQIIDVDEKNQILTTNAWLKLEWVDYNLQ 117
Query: 243 WNAGGMG 263
WN G
Sbjct: 118 WNESEYG 124
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 31.1 bits (67), Expect = 0.013
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 280 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 456
++ +LW+PD+++ N+A G Y V++NGS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 457 XTC 465
C
Sbjct: 123 QHC 125
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 168 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 263
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 30.3 bits (65), Expect = 0.023
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 280 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 456
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDD 122
Query: 457 XTC 465
C
Sbjct: 123 QHC 125
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 168 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 263
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 29.9 bits (64), Expect = 0.031
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 280 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 456
++ +LW+PD+++ N+A G Y V+++GS ++ + M + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDD 122
Query: 457 XTC 465
C
Sbjct: 123 QHC 125
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 168 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 263
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 29.1 bits (62), Expect = 0.053
Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 280 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 456
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDD 122
Query: 457 XTC 465
C
Sbjct: 123 QHC 125
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 168 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 263
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 29.1 bits (62), Expect = 0.053
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Frame = +3
Query: 78 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 236
++D++L YD E+ D +V + L +R A I + + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 237 LSWNAGGMGLQHL 275
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 29.1 bits (62), Expect = 0.053
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Frame = +1
Query: 280 VSSERLWRPDVVLLNAAATT---AGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPN 450
V S+ +W PD+ + N+ T G V ++GSVS + + + WP
Sbjct: 119 VKSDDIWVPDISVYNSGDMTFDQTGIPPTTCLVFSSGSVSCVPSVKHVAKCATDFSSWPY 178
Query: 451 DMXTC 465
D C
Sbjct: 179 DTHRC 183
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.071
Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 280 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 456
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDD 122
Query: 457 XTC 465
C
Sbjct: 123 QHC 125
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 168 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 263
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 28.7 bits (61), Expect = 0.071
Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +1
Query: 280 VSSERLWRPDVVLLNAA-ATTAGDYALRARVSNNGSVSWIKRLDISTPISMQLDXWPNDM 456
++ +LW+PD+++ N+A G Y V+++GS ++ + + + +P D
Sbjct: 63 ITPNKLWKPDILMYNSADEGFDGTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDD 122
Query: 457 XTC 465
C
Sbjct: 123 QHC 125
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = +3
Query: 168 NIRESESTVRILADLQMNWIDKRLSWNAGGMG 263
++ E + A L++ W+D L WN G
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYG 56
>DQ667194-1|ABG75746.1| 391|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 391
Score = 26.2 bits (55), Expect = 0.38
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Frame = +1
Query: 289 ERLWRPDVVLLNAAATTAGDYALRARVSN-----NGSVSWIKRLDISTPISMQLDXWPND 453
+ LW+PD LNA + AL + S+ N +V + R+ M+ +P D
Sbjct: 69 DSLWQPDPYFLNAKVSEIA--ALNHKFSSVTLYRNKTVKYSARMHAIIACQMEFQLYPMD 126
Query: 454 MXTCTFQV 477
+ C +
Sbjct: 127 IQICPIYI 134
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 26.2 bits (55), Expect = 0.38
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Frame = +3
Query: 78 MIDSLLATYDR------ESPPDSKIVVNLTLHLRH-ANIRESESTVRILADLQMNWIDKR 236
++D++L YD E+ D VV + + +R + I + + + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQLTFREQWLDER 94
Query: 237 LSWNAGGMGLQHL 275
L +N G L++L
Sbjct: 95 LRFNDFGGRLKYL 107
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 25.0 bits (52), Expect = 0.87
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +1
Query: 364 RVSNNGSVSWIKRLDISTPISMQLDXWPNDMXTCTFQV 477
R+ NG+V+++ R + +L+ +P D C+F +
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAI 204
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 25.0 bits (52), Expect = 0.87
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +1
Query: 364 RVSNNGSVSWIKRLDISTPISMQLDXWPNDMXTCTFQV 477
R+ NG+V+++ R + +L+ +P D C+F +
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAI 204
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 25.0 bits (52), Expect = 0.87
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +1
Query: 364 RVSNNGSVSWIKRLDISTPISMQLDXWPNDMXTCTFQV 477
R+ NG+V+++ R + +L+ +P D C+F +
Sbjct: 218 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAI 255
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 25.0 bits (52), Expect = 0.87
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +1
Query: 364 RVSNNGSVSWIKRLDISTPISMQLDXWPNDMXTCTFQV 477
R+ NG+V+++ R + +L+ +P D C+F +
Sbjct: 167 RIYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAI 204
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 25.0 bits (52), Expect = 0.87
Identities = 13/66 (19%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +1
Query: 289 ERLWRPDVVLLNAAATTAGDYALRAR---VSNNGSVSWIKRLDISTPISMQLDXWPNDMX 459
+ +WRPD NA + T + + + ++ ++ +L + +M +P+D
Sbjct: 116 KNMWRPDSFFKNAKSVTFQTMTIPNHYLWLYKDKTILYMVKLTLKLSCAMNFLIYPHDTQ 175
Query: 460 TCTFQV 477
C Q+
Sbjct: 176 ECKLQM 181
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.4 bits (48), Expect = 2.7
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +3
Query: 57 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 224
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSLSEVKMDFTLDFYFRQFW 67
Query: 225 IDKRLSW 245
D RL++
Sbjct: 68 TDPRLAF 74
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 23.4 bits (48), Expect = 2.7
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = -3
Query: 74 GQ*CCVFAFCRTSYSTSEEKXVTQ 3
G+ CC F T Y + K VTQ
Sbjct: 602 GEQCCWHCFNCTQYQIRDHKDVTQ 625
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.2 bits (45), Expect = 6.1
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +3
Query: 57 NATSLSLMIDSLLATYDRESPPD---SKIVVNLTLH-LRHANIRESESTVRILADLQMNW 224
N ++S ++DS +YD+ P+ + V +T++ L +++ E + + W
Sbjct: 8 NDVNISAILDSFSVSYDKRVRPNYGGPPVEVGVTMYVLSISSVSEVLMDFTLDFYFRQFW 67
Query: 225 IDKRLSW 245
D RL++
Sbjct: 68 TDPRLAF 74
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 21.8 bits (44), Expect = 8.1
Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Frame = +3
Query: 111 ESPPDSKIVVNLTLHLRHANIRESESTVRILADLQMNWIDKRLSWNAGGMGLQHLAGVL- 287
E + ++N L + + + ++ + D + N + + S AGG+ + AG++
Sbjct: 233 EGDDQQRAIINTLLSISASCVIAFATSALVSKDSKFNMVHIQNSTLAGGVAIGTAAGMMC 292
Query: 288 ---GTLV 299
GTL+
Sbjct: 293 QPVGTLI 299
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,974
Number of Sequences: 438
Number of extensions: 5066
Number of successful extensions: 55
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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