Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_FL5_D13
         (782 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0345 + 4529272-4530514,4530634-4530740                           30   1.8  
11_01_0600 - 4780579-4780839,4781256-4781324,4781535-4781598,478...    28   7.3  

>04_01_0345 + 4529272-4530514,4530634-4530740
          Length = 449

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +2

Query: 311 GSFCDYHGCHG*RGIRVSIPEREPXKRLPHPRKAAGAQITHSRHGE 448
           G  CD+  CHG   +   I    P   LPH   A  A++  S  GE
Sbjct: 172 GGGCDHRSCHGGPFLVALIWSHSPSPFLPHLPGATSARVYSSDTGE 217


>11_01_0600 -
           4780579-4780839,4781256-4781324,4781535-4781598,
           4781791-4781919,4782234-4782541
          Length = 276

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -2

Query: 421 RACCLPWMW*PFXRLPLRNRNPDSPLPVTT 332
           R   LP MW P  RL L++R P S  P  T
Sbjct: 63  RRTWLPAMWSPDCRLELQHRRPPSTAPPLT 92


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,142,267
Number of Sequences: 37544
Number of extensions: 363501
Number of successful extensions: 704
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 704
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)