Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_FL5_D12
         (818 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2120|AAF48437.1|  984|Drosophila melanogaster CG5877-PA...    31   1.4  
AE013599-1608|ABC66062.1| 1526|Drosophila melanogaster CG3845-PC...    31   2.5  
AB096103-1|BAD83642.1| 1526|Drosophila melanogaster hypothetical...    31   2.5  
AE014298-1144|AAF46343.1|  600|Drosophila melanogaster CG2278-PA...    30   4.4  

>AE014298-2120|AAF48437.1|  984|Drosophila melanogaster CG5877-PA,
           isoform A protein.
          Length = 984

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 11/19 (57%), Positives = 14/19 (73%)
 Frame = -2

Query: 577 DQLLHQLRTAMHHHPPNQE 521
           +Q +H L TAM HHP NQ+
Sbjct: 211 EQQIHSLETAMEHHPSNQQ 229


>AE013599-1608|ABC66062.1| 1526|Drosophila melanogaster CG3845-PC,
           isoform C protein.
          Length = 1526

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -1

Query: 386 TPPGVQNLWFPGSCPPSHCSNVGGSLDDIFTVRTRAVSNRLRTSNFR 246
           TPP +   W P S  P H        D +F  R R + N+L    F+
Sbjct: 527 TPPPITGRWIPPSLRPQHGLTQSEKNDAVFR-RVRGILNKLTPEKFQ 572


>AB096103-1|BAD83642.1| 1526|Drosophila melanogaster hypothetical
           protein protein.
          Length = 1526

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -1

Query: 386 TPPGVQNLWFPGSCPPSHCSNVGGSLDDIFTVRTRAVSNRLRTSNFR 246
           TPP +   W P S  P H        D +F  R R + N+L    F+
Sbjct: 527 TPPPITGRWIPPSLRPQHGLTQSEKNDAVFR-RVRGILNKLTPEKFQ 572


>AE014298-1144|AAF46343.1|  600|Drosophila melanogaster CG2278-PA
           protein.
          Length = 600

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 18/61 (29%), Positives = 28/61 (45%)
 Frame = -2

Query: 544 HHHPPNQERAVNLSILPVSGPGEISRVGSN*AAGSTPGGALPSIPLSFSFATILPPESKI 365
           HHH P+Q + V  +++    P +   V S   AG+ P    P   LS S      P++ +
Sbjct: 188 HHHHPHQPQPVPSAVVTTVAPSQPPAVVSALYAGTQPPTPSPRRKLSNSSFGNANPQADV 247

Query: 364 F 362
           F
Sbjct: 248 F 248


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,039,855
Number of Sequences: 53049
Number of extensions: 842787
Number of successful extensions: 2361
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2155
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2360
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3860063376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)