Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BmNP16_FL5_D10
         (819 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical pr...    28   7.0  
AF002196-7|AAB53977.1|  254|Caenorhabditis elegans Hypothetical ...    28   9.2  

>U41541-3|AAK18894.1| 7829|Caenorhabditis elegans Hypothetical protein
            C41A3.1 protein.
          Length = 7829

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = -2

Query: 710  FYNLXXSLKCFSNRFHYFF 654
            FYNL  S KCFS  FH+ F
Sbjct: 3300 FYNLLQS-KCFSKHFHWLF 3317


>AF002196-7|AAB53977.1|  254|Caenorhabditis elegans Hypothetical
           protein C09D4.2 protein.
          Length = 254

 Score = 27.9 bits (59), Expect = 9.2
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +2

Query: 161 VSQNTGTCPESSCACPETSCAC 226
           +S  TG+  E+ CAC   +CAC
Sbjct: 126 LSLRTGSSNENGCACVHGNCAC 147


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,300,081
Number of Sequences: 27780
Number of extensions: 108049
Number of successful extensions: 354
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 354
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)