Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_C22
(876 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 200 1e-51
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 147 8e-36
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 147 8e-36
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 105 5e-23
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 101 5e-22
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 100 3e-21
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 97 1e-20
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 97 1e-20
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 95 6e-20
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 94 1e-19
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 94 1e-19
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 93 2e-19
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 90 2e-18
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 90 2e-18
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 89 4e-18
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 85 5e-17
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 85 5e-17
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 85 5e-17
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 84 1e-16
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 84 1e-16
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 84 1e-16
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 83 3e-16
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 83 3e-16
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 81 1e-15
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 80 2e-15
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 80 2e-15
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 78 1e-14
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 77 2e-14
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 75 9e-14
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 72 5e-13
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 70 2e-12
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 70 2e-12
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 70 2e-12
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 68 8e-12
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 68 1e-11
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 68 1e-11
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 68 1e-11
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 68 1e-11
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 65 7e-11
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 62 5e-10
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 62 5e-10
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 62 5e-10
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 60 2e-09
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 60 2e-09
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 59 5e-09
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 57 1e-08
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 55 8e-08
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 39 0.004
AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related... 38 0.007
AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related... 38 0.007
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 38 0.012
U58729-3|AAM54204.1| 955|Caenorhabditis elegans Hypothetical pr... 33 0.27
U58729-2|AAM54203.1| 913|Caenorhabditis elegans Hypothetical pr... 33 0.27
U58729-1|AAM54202.1| 928|Caenorhabditis elegans Hypothetical pr... 33 0.27
AF456360-1|AAL60231.1| 928|Caenorhabditis elegans immunoglobuli... 33 0.27
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 32 0.62
Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 31 1.4
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ... 31 1.4
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 30 1.9
AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical ... 30 1.9
AF101305-8|AAF98599.1| 534|Caenorhabditis elegans Hypothetical ... 30 2.5
Z81523-2|CAB04248.1| 928|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z81523-1|CAB04241.1| 944|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical p... 28 7.6
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z68317-4|CAA92688.1| 486|Caenorhabditis elegans Hypothetical pr... 28 7.6
U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved olig... 28 7.6
U42831-1|AAA83513.2| 614|Caenorhabditis elegans Hypothetical pr... 28 7.6
AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase... 28 7.6
AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical ... 28 7.6
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 200 bits (488), Expect = 1e-51
Identities = 92/163 (56%), Positives = 127/163 (77%), Gaps = 2/163 (1%)
Frame = +3
Query: 165 DKESYGDETNQDSEVEQTPTENVTEDTEDD--KITFKDLGVVDVLCEACEELKWKKPSKI 338
D + + ++ ++ TE + +D E+D + +F +LGV LC+AC+ L W KPSKI
Sbjct: 11 DNQKFLGNRKKNLTKKKVVTEEIEKDDEEDVKEKSFAELGVSQPLCDACQRLGWMKPSKI 70
Query: 339 QKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISE 518
Q+ A+P AL GKD+IGLAETGSGKTGAFA+P+LQ+LL++PQ +F L+LTPTRELAFQI +
Sbjct: 71 QQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTRELAFQIGQ 130
Query: 519 QFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGKI 647
QFEALG+ IG+ AVIVGG+DM AQA+ L+++PHII+ATPG++
Sbjct: 131 QFEALGSGIGLIAAVIVGGVDMAAQAMALARRPHIIVATPGRL 173
Score = 48.4 bits (110), Expect = 7e-06
Identities = 20/23 (86%), Positives = 23/23 (100%)
Frame = +2
Query: 650 VDHLENTKGFNLRALKYLVMDEA 718
VDHLENTKGFNL+ALK+L+MDEA
Sbjct: 174 VDHLENTKGFNLKALKFLIMDEA 196
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 147 bits (357), Expect = 8e-36
Identities = 75/162 (46%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Frame = +3
Query: 165 DKESYGDETNQDSEVEQTPTE-NVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQ 341
++ES G+E ++ + TP ++ED K F LGV + + + ++ K + +Q
Sbjct: 58 EEESEGEEGDEFKSSDDTPKPIQISEDNMTTK-KFSQLGVCSWITQQLQTMQIKTATPVQ 116
Query: 342 KEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQ 521
IP L G DI+G A TG+GKT AFA+PILQ L +P +ALILTPTRELAFQI+EQ
Sbjct: 117 AACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQ 176
Query: 522 FEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGKI 647
F ALG I +KC+VIVGG ++ QA LS++PH+++ATPG++
Sbjct: 177 FTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRL 218
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 147 bits (357), Expect = 8e-36
Identities = 75/162 (46%), Positives = 107/162 (66%), Gaps = 1/162 (0%)
Frame = +3
Query: 165 DKESYGDETNQDSEVEQTPTE-NVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQ 341
++ES G+E ++ + TP ++ED K F LGV + + + ++ K + +Q
Sbjct: 58 EEESEGEEGDEFKSSDDTPKPIQISEDNMTTK-KFSQLGVCSWITQQLQTMQIKTATPVQ 116
Query: 342 KEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQ 521
IP L G DI+G A TG+GKT AFA+PILQ L +P +ALILTPTRELAFQI+EQ
Sbjct: 117 AACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIAEQ 176
Query: 522 FEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGKI 647
F ALG I +KC+VIVGG ++ QA LS++PH+++ATPG++
Sbjct: 177 FTALGKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRL 218
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 105 bits (251), Expect = 5e-23
Identities = 51/133 (38%), Positives = 79/133 (59%), Gaps = 3/133 (2%)
Frame = +3
Query: 258 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 437
++F+ + + + +AC + P+ IQ+ IPVAL GKDI A TG+GKT AF LPIL
Sbjct: 148 VSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPIL 207
Query: 438 QALLENPQRYF---ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS 608
+ ++ P+ L+L PTRELA Q+ + F L I ++ + GG+D+ AQ L
Sbjct: 208 ERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAGGLDLKAQEAALR 267
Query: 609 KKPHIIIATPGKI 647
P +++ATPG++
Sbjct: 268 SGPDVVVATPGRL 280
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 101 bits (243), Expect = 5e-22
Identities = 51/137 (37%), Positives = 83/137 (60%), Gaps = 9/137 (6%)
Frame = +3
Query: 264 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 443
+++ G D + +A +E+ + +P+ IQ++AIP+ L +D+IG+AETGSGKT AF LP+L
Sbjct: 303 WEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVW 362
Query: 444 LLENPQRY---------FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQA 596
+ P+ +A+I+ PTRELA QI E+ G +G+K ++GG Q
Sbjct: 363 ITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIGGASREDQG 422
Query: 597 LMLSKKPHIIIATPGKI 647
+ L ++IATPG++
Sbjct: 423 MKLRMGVEVVIATPGRL 439
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 99.5 bits (237), Expect = 3e-21
Identities = 53/139 (38%), Positives = 81/139 (58%), Gaps = 1/139 (0%)
Frame = +3
Query: 234 TEDTEDDK-ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGK 410
T D D K + F+D + L E W+KPS IQ+ +I VAL G+DI+ A+ G+GK
Sbjct: 34 TADVTDTKGVEFEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGK 93
Query: 411 TGAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVA 590
TGA+ +P+++ + + A+++ PTRELA Q S+ L I +K V GG D+
Sbjct: 94 TGAYCIPVIEKIQPALKAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTGGTDLRD 153
Query: 591 QALMLSKKPHIIIATPGKI 647
+ L+ H++IATPG+I
Sbjct: 154 DIMRLNGTVHLVIATPGRI 172
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 97.1 bits (231), Expect = 1e-20
Identities = 47/129 (36%), Positives = 81/129 (62%), Gaps = 1/129 (0%)
Frame = +3
Query: 264 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 443
++ +G+ + +A E+ + +P+ IQ++ IP + GKD++ ++ TGSGKT AF +P+LQ
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQK 85
Query: 444 LLENPQRYF-ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 620
L AL+++PTRELA Q + + LG G++CA +VGG + Q + + P
Sbjct: 86 LKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPD 145
Query: 621 IIIATPGKI 647
I++ATPG++
Sbjct: 146 ILLATPGRL 154
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 97.1 bits (231), Expect = 1e-20
Identities = 47/129 (36%), Positives = 81/129 (62%), Gaps = 1/129 (0%)
Frame = +3
Query: 264 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 443
++ +G+ + +A E+ + +P+ IQ++ IP + GKD++ ++ TGSGKT AF +P+LQ
Sbjct: 26 WQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQK 85
Query: 444 LLENPQRYF-ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 620
L AL+++PTRELA Q + + LG G++CA +VGG + Q + + P
Sbjct: 86 LKRRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIEEQFSTIHENPD 145
Query: 621 IIIATPGKI 647
I++ATPG++
Sbjct: 146 ILLATPGRL 154
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 95.1 bits (226), Expect = 6e-20
Identities = 51/139 (36%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
Frame = +3
Query: 237 EDTEDDKI--TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGK 410
E +E+ I TF +G+ + L ++KPS IQ+ AIP L +D+I A++G+GK
Sbjct: 17 ESSEEVSIIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGK 76
Query: 411 TGAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVA 590
T F++ +LQ+L + ALIL+PTRELA QI + ALG + V+C +GG ++
Sbjct: 77 TATFSISVLQSLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGE 136
Query: 591 QALMLSKKPHIIIATPGKI 647
L H++ TPG++
Sbjct: 137 DIRKLDYGQHVVSGTPGRV 155
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 94.3 bits (224), Expect = 1e-19
Identities = 47/129 (36%), Positives = 75/129 (58%)
Frame = +3
Query: 261 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 440
TF +G+ + L ++KPS IQ+ A+P L +D+I A++G+GKT F++ +LQ
Sbjct: 27 TFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQ 86
Query: 441 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 620
+L + ALIL+PTRELA QI + ALG + V+C +GG ++ L H
Sbjct: 87 SLDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIGGTNLGEDIRKLDYGQH 146
Query: 621 IIIATPGKI 647
++ TPG++
Sbjct: 147 VVSGTPGRV 155
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 94.3 bits (224), Expect = 1e-19
Identities = 56/160 (35%), Positives = 90/160 (56%), Gaps = 4/160 (2%)
Frame = +3
Query: 180 GDETNQDSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPV 359
G E EVEQ E + + + + F+D + E ++ + KP++IQ++ I
Sbjct: 51 GQEETMLDEVEQKYQEMLKKSSRTF-LRFEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAY 109
Query: 360 ALLGKDIIGLAETGSGKTGAFALPILQALLE---NPQRYF-ALILTPTRELAFQISEQFE 527
+L G D++G A+TGSGKT A +P+L+AL +P ALI++PTRELA Q
Sbjct: 110 SLTGSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPDYGLGALIISPTRELALQTFSTIN 169
Query: 528 ALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGKI 647
A+GA G C +++GG D+ + +S +II+ TPG++
Sbjct: 170 AVGAHHGFSCGLVIGGSDVAFERNRIS-GINIIVCTPGRL 208
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 93.1 bits (221), Expect = 2e-19
Identities = 48/134 (35%), Positives = 78/134 (58%), Gaps = 5/134 (3%)
Frame = +3
Query: 261 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 440
T+ GV + ++ ++ KP+ IQ +AIP + G+D+IG+A+TGSGKT AF LP+ +
Sbjct: 305 TWAQCGVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFR 364
Query: 441 ALLENPQRY-----FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALML 605
+L+ P+ A+IL PTRELA Q ++ +G+K A GG+ + Q L
Sbjct: 365 HILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGGVGISEQIADL 424
Query: 606 SKKPHIIIATPGKI 647
+ I++ TPG++
Sbjct: 425 KRGAEIVVCTPGRM 438
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 89.8 bits (213), Expect = 2e-18
Identities = 46/130 (35%), Positives = 70/130 (53%)
Frame = +3
Query: 261 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 440
+F D+ + + L ++KPS IQK AI GKD+I A++G+GKT F++ ILQ
Sbjct: 30 SFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQ 89
Query: 441 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 620
+ AL++ PTRELA QI + ALG + V +GG + L H
Sbjct: 90 RIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIH 149
Query: 621 IIIATPGKIG 650
+++ TPG++G
Sbjct: 150 VVVGTPGRVG 159
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 89.8 bits (213), Expect = 2e-18
Identities = 46/130 (35%), Positives = 70/130 (53%)
Frame = +3
Query: 261 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 440
+F D+ + + L ++KPS IQK AI GKD+I A++G+GKT F++ ILQ
Sbjct: 30 SFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQ 89
Query: 441 ALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 620
+ AL++ PTRELA QI + ALG + V +GG + L H
Sbjct: 90 RIDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIGGTSVRDDQRKLEAGIH 149
Query: 621 IIIATPGKIG 650
+++ TPG++G
Sbjct: 150 VVVGTPGRVG 159
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 89.0 bits (211), Expect = 4e-18
Identities = 47/142 (33%), Positives = 83/142 (58%), Gaps = 6/142 (4%)
Frame = +3
Query: 240 DTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGA 419
D E + TF D G+ + + ++ EL W+K +++Q+ I +AL K+I+G A TGSGKTGA
Sbjct: 83 DFEPEHKTFADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGA 142
Query: 420 FALPILQALLENPQRY------FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMD 581
F +P++Q L+ + A+I+ PT+EL QI + F L ++ A+ + ++
Sbjct: 143 FLIPLVQKLIAESKTNDGSVGPSAVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDIN 202
Query: 582 MVAQALMLSKKPHIIIATPGKI 647
++ L + H+++ TPGK+
Sbjct: 203 EEENSVWLEDRSHVVVTTPGKL 224
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 85.4 bits (202), Expect = 5e-17
Identities = 47/130 (36%), Positives = 73/130 (56%), Gaps = 2/130 (1%)
Frame = +3
Query: 264 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 443
F+D + + A + ++ PS++Q E IP A+LG D++ A++G GKT F + LQ
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 444 LLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKK-P 617
L + + TRELAFQIS+++E + GVK AV GGM + L+ P
Sbjct: 103 LEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCP 162
Query: 618 HIIIATPGKI 647
HI++ TPG++
Sbjct: 163 HIVVGTPGRM 172
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 85.4 bits (202), Expect = 5e-17
Identities = 47/130 (36%), Positives = 73/130 (56%), Gaps = 2/130 (1%)
Frame = +3
Query: 264 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 443
F+D + + A + ++ PS++Q E IP A+LG D++ A++G GKT F + LQ
Sbjct: 43 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 102
Query: 444 LLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKK-P 617
L + + TRELAFQIS+++E + GVK AV GGM + L+ P
Sbjct: 103 LEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCP 162
Query: 618 HIIIATPGKI 647
HI++ TPG++
Sbjct: 163 HIVVGTPGRM 172
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 85.4 bits (202), Expect = 5e-17
Identities = 47/130 (36%), Positives = 73/130 (56%), Gaps = 2/130 (1%)
Frame = +3
Query: 264 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 443
F+D + + A + ++ PS++Q E IP A+LG D++ A++G GKT F + LQ
Sbjct: 42 FRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQ 101
Query: 444 LLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSKK-P 617
L + + TRELAFQIS+++E + GVK AV GGM + L+ P
Sbjct: 102 LEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCP 161
Query: 618 HIIIATPGKI 647
HI++ TPG++
Sbjct: 162 HIVVGTPGRM 171
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 83.8 bits (198), Expect = 1e-16
Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 21/171 (12%)
Frame = +3
Query: 198 DSEVEQTPTENVTEDTEDDKIT-----FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVA 362
DS + EN+ + D + F + G + E + KP+ +QK +IP
Sbjct: 114 DSGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTL 173
Query: 363 LLGKDIIGLAETGSGKTGAFALPILQALL------------ENPQRYF---ALILTPTRE 497
L +D++ A+TGSGKT AF LPI+Q +L N +R + AL+L+PTRE
Sbjct: 174 LANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRE 233
Query: 498 LAFQISEQFEALGASIGVKCAVIVGGMDMVA-QALMLSKKPHIIIATPGKI 647
LA QI ++ ++ A++ GG + Q L HI+IATPG++
Sbjct: 234 LAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRL 284
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 83.8 bits (198), Expect = 1e-16
Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 21/171 (12%)
Frame = +3
Query: 198 DSEVEQTPTENVTEDTEDDKIT-----FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVA 362
DS + EN+ + D + F + G + E + KP+ +QK +IP
Sbjct: 98 DSGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTL 157
Query: 363 LLGKDIIGLAETGSGKTGAFALPILQALL------------ENPQRYF---ALILTPTRE 497
L +D++ A+TGSGKT AF LPI+Q +L N +R + AL+L+PTRE
Sbjct: 158 LANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRE 217
Query: 498 LAFQISEQFEALGASIGVKCAVIVGGMDMVA-QALMLSKKPHIIIATPGKI 647
LA QI ++ ++ A++ GG + Q L HI+IATPG++
Sbjct: 218 LAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRL 268
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 83.8 bits (198), Expect = 1e-16
Identities = 55/171 (32%), Positives = 85/171 (49%), Gaps = 21/171 (12%)
Frame = +3
Query: 198 DSEVEQTPTENVTEDTEDDKIT-----FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVA 362
DS + EN+ + D + F + G + E + KP+ +QK +IP
Sbjct: 95 DSGINFDKYENIPVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTL 154
Query: 363 LLGKDIIGLAETGSGKTGAFALPILQALL------------ENPQRYF---ALILTPTRE 497
L +D++ A+TGSGKT AF LPI+Q +L N +R + AL+L+PTRE
Sbjct: 155 LANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRE 214
Query: 498 LAFQISEQFEALGASIGVKCAVIVGGMDMVA-QALMLSKKPHIIIATPGKI 647
LA QI ++ ++ A++ GG + Q L HI+IATPG++
Sbjct: 215 LAIQIHKEATKFSYKSNIQTAILYGGRENYRDQVNRLRAGTHILIATPGRL 265
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 83.0 bits (196), Expect = 3e-16
Identities = 49/130 (37%), Positives = 79/130 (60%), Gaps = 13/130 (10%)
Frame = +3
Query: 297 EACEELKWKKPSKIQKEAIPVALLGK-DIIGLAETGSGKTGAFALPILQALLENP----- 458
EA E++ + +P++IQ +P A+ + D++G AETGSGKT AF +P++ LLE+
Sbjct: 168 EAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQE 227
Query: 459 ------QRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS-KKP 617
+ ALI+ PTREL QI + AL ++ + IVGG+ V Q ++S ++P
Sbjct: 228 TESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRP 287
Query: 618 HIIIATPGKI 647
I++ATPG++
Sbjct: 288 DIVVATPGRL 297
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 82.6 bits (195), Expect = 3e-16
Identities = 48/116 (41%), Positives = 69/116 (59%), Gaps = 5/116 (4%)
Frame = +3
Query: 315 KWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL-----QALLENPQRYFALI 479
K++KP+ IQ + P+A+ G+DII +A+TGSGKT AF LP L QA + + L+
Sbjct: 148 KFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLV 207
Query: 480 LTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGKI 647
L PTRELA Q+ E S+G+K + GG QA L + I++ATPG++
Sbjct: 208 LLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASKGPQARDLERGVDIVVATPGRL 263
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 81.0 bits (191), Expect = 1e-15
Identities = 49/121 (40%), Positives = 72/121 (59%), Gaps = 14/121 (11%)
Frame = +3
Query: 327 PSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRY--------FALIL 482
P+ IQ + IPVAL G+D+IG+A TGSGKT F LP++ LE + F LI+
Sbjct: 213 PTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLII 272
Query: 483 TPTRELAFQ----ISEQFEALGAS--IGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGK 644
P+RELA Q I E F+ALG + ++ + +GG+ + QA + HI++ATPG+
Sbjct: 273 VPSRELARQIFDLIIEMFDALGKAGLPEMRAGLCIGGVPIGEQAKDVRDGIHIVVATPGR 332
Query: 645 I 647
+
Sbjct: 333 L 333
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 79.8 bits (188), Expect = 2e-15
Identities = 49/150 (32%), Positives = 82/150 (54%), Gaps = 1/150 (0%)
Frame = +3
Query: 201 SEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDI 380
SEV + + D + + TF+ L + E + ++ +PS +Q AIPV LLG+D+
Sbjct: 4 SEVIEVLDRGSSIDVQSN-CTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDM 62
Query: 381 IGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCA 560
+ A++G+GKT F++ ++ L +I+TPTRE++ QI E + A G + +
Sbjct: 63 LVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKV-APTGARTS 121
Query: 561 VIVGGMDMVAQALMLSK-KPHIIIATPGKI 647
V VGG + L + +P I+I TPG+I
Sbjct: 122 VYVGGSAHKLNLIDLKQTRPQIVIGTPGRI 151
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 79.8 bits (188), Expect = 2e-15
Identities = 49/150 (32%), Positives = 82/150 (54%), Gaps = 1/150 (0%)
Frame = +3
Query: 201 SEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDI 380
SEV + + D + + TF+ L + E + ++ +PS +Q AIPV LLG+D+
Sbjct: 4 SEVIEVLDRGSSIDVQSN-CTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDM 62
Query: 381 IGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISEQFEALGASIGVKCA 560
+ A++G+GKT F++ ++ L +I+TPTRE++ QI E + A G + +
Sbjct: 63 LVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKV-APTGARTS 121
Query: 561 VIVGGMDMVAQALMLSK-KPHIIIATPGKI 647
V VGG + L + +P I+I TPG+I
Sbjct: 122 VYVGGSAHKLNLIDLKQTRPQIVIGTPGRI 151
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 77.8 bits (183), Expect = 1e-14
Identities = 46/124 (37%), Positives = 75/124 (60%), Gaps = 13/124 (10%)
Frame = +3
Query: 315 KWKKPSKIQKEAIPVALLGK-DIIGLAETGSGKTGAFALPILQALLENP----------- 458
++ +P++IQ +P A+ + D++G AETGSGKT AF +P++ LLE+
Sbjct: 7 RFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEV 66
Query: 459 QRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLS-KKPHIIIAT 635
+ ALI+ PTREL QI + AL ++ + IVGG+ V Q ++S ++P I++AT
Sbjct: 67 RGPRALIVAPTRELVIQIMKHINALISTTQLIATSIVGGLAQVKQERIISQQRPDIVVAT 126
Query: 636 PGKI 647
PG++
Sbjct: 127 PGRL 130
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 76.6 bits (180), Expect = 2e-14
Identities = 50/163 (30%), Positives = 82/163 (50%), Gaps = 17/163 (10%)
Frame = +3
Query: 210 EQTPTENVTEDTEDDKITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGL 389
E+ P E +D F DL + + + E + + +P+ +QK +IP G+D++
Sbjct: 150 EEIPVEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSC 209
Query: 390 AETGSGKTGAFALPILQALLEN----------------PQRYFALILTPTRELAFQISEQ 521
A+TGSGKT AF +P++ A+L++ Q AL+L+PTREL+ QI +
Sbjct: 210 AQTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNE 269
Query: 522 FEALGASIGVKCAVIVGGMDMVA-QALMLSKKPHIIIATPGKI 647
+ A++ GG + Q L HI+IATPG++
Sbjct: 270 SRKFAYRTPITSALLYGGRENYKDQIHKLRLGCHILIATPGRL 312
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 74.5 bits (175), Expect = 9e-14
Identities = 41/126 (32%), Positives = 72/126 (57%), Gaps = 6/126 (4%)
Frame = +3
Query: 288 VLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENP--- 458
+L EA + ++++P+ IQ AIP AL G+D++G+A+TGSGKT A+ P + +++ P
Sbjct: 275 LLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLK 334
Query: 459 --QRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKK-PHIII 629
+ A+I+ PTRELA Q+ ++ + + GG Q+ L + +++
Sbjct: 335 AGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSKWEQSNELQNEGAEMVV 394
Query: 630 ATPGKI 647
TPG+I
Sbjct: 395 CTPGRI 400
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 72.1 bits (169), Expect = 5e-13
Identities = 59/189 (31%), Positives = 102/189 (53%), Gaps = 15/189 (7%)
Frame = +3
Query: 126 IPQNNDNLEKMTADKESYGDETNQDSEVEQTPTE--NVTEDTEDDKI-------TFKDL- 275
+ Q D EK A KE +E ++ + E+ E + TE++ + K+ TF L
Sbjct: 14 LKQMKDGHEKKKA-KEVVVEEPMEEEDEEEVEEEQKHQTEESSETKVSEFLTKTTFASLE 72
Query: 276 GVVDV-LCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLE 452
G V+ L +A + L + ++IQ ++I L GKD++ A+TGSGKT AF LP ++ L +
Sbjct: 73 GKVNANLLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHK 132
Query: 453 -NPQRY---FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPH 620
N +++ +I++PTREL+ Q L + +++GG + A+ L+K
Sbjct: 133 LNWKQHNGTGVIIVSPTRELSMQTYGVLSELLEGSNLTYGLVMGGSNRSAEKDKLAKGVS 192
Query: 621 IIIATPGKI 647
I++ATPG++
Sbjct: 193 ILVATPGRL 201
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 650 VDHLENTKGFNLRALKYLVMDEAGXNSPHGF 742
+DHL+NT F +R +K L++DEA GF
Sbjct: 202 LDHLQNTDNFLVRNMKCLIIDEADRILDIGF 232
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 70.1 bits (164), Expect = 2e-12
Identities = 57/181 (31%), Positives = 90/181 (49%), Gaps = 12/181 (6%)
Frame = +3
Query: 141 DNLEKM-TADKESYGDETNQ--DSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACEE 311
DN+E + K S G N+ D+EV+ T +E T + K TF + + + + +
Sbjct: 301 DNMEDVFNMQKISEGLMFNKFFDAEVKLTSSEK-TVGIKPCK-TFAEANLTETMQKNVAH 358
Query: 312 LKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFA------ 473
+ K + IQ+ A+P+ G DI+ A+TGSGKT AF LPI+ L+++ A
Sbjct: 359 AGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCY 418
Query: 474 ---LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGK 644
+ILTPTRELA QI + ++ + GG+ + + K II+ T G+
Sbjct: 419 PRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGR 478
Query: 645 I 647
I
Sbjct: 479 I 479
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 70.1 bits (164), Expect = 2e-12
Identities = 57/181 (31%), Positives = 90/181 (49%), Gaps = 12/181 (6%)
Frame = +3
Query: 141 DNLEKM-TADKESYGDETNQ--DSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACEE 311
DN+E + K S G N+ D+EV+ T +E T + K TF + + + + +
Sbjct: 301 DNMEDVFNMQKISEGLMFNKFFDAEVKLTSSEK-TVGIKPCK-TFAEANLTETMQKNVAH 358
Query: 312 LKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFA------ 473
+ K + IQ+ A+P+ G DI+ A+TGSGKT AF LPI+ L+++ A
Sbjct: 359 AGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCY 418
Query: 474 ---LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGK 644
+ILTPTRELA QI + ++ + GG+ + + K II+ T G+
Sbjct: 419 PRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGR 478
Query: 645 I 647
I
Sbjct: 479 I 479
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 70.1 bits (164), Expect = 2e-12
Identities = 57/181 (31%), Positives = 90/181 (49%), Gaps = 12/181 (6%)
Frame = +3
Query: 141 DNLEKM-TADKESYGDETNQ--DSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACEE 311
DN+E + K S G N+ D+EV+ T +E T + K TF + + + + +
Sbjct: 301 DNMEDVFNMQKISEGLMFNKFFDAEVKLTSSEK-TVGIKPCK-TFAEANLTETMQKNVAH 358
Query: 312 LKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFA------ 473
+ K + IQ+ A+P+ G DI+ A+TGSGKT AF LPI+ L+++ A
Sbjct: 359 AGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCY 418
Query: 474 ---LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGK 644
+ILTPTRELA QI + ++ + GG+ + + K II+ T G+
Sbjct: 419 PRCIILTPTRELADQIYNEGRKFAYQTMMEIKPVYGGLAVGYNKGQIEKGATIIVGTVGR 478
Query: 645 I 647
I
Sbjct: 479 I 479
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 68.1 bits (159), Expect = 8e-12
Identities = 45/121 (37%), Positives = 64/121 (52%), Gaps = 11/121 (9%)
Frame = +3
Query: 318 WKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRY---------- 467
++KPS IQ + P+ L G+D IG+++TGSGKT AF LP L + +Y
Sbjct: 104 FEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPS 163
Query: 468 -FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGK 644
F L+L+PTRELA QI + + + G K + GG Q I+IATPG+
Sbjct: 164 PFVLVLSPTRELAQQIEGEVKKYSYN-GYKSVCLYGGGSRPEQVEACRGGVEIVIATPGR 222
Query: 645 I 647
+
Sbjct: 223 L 223
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 67.7 bits (158), Expect = 1e-11
Identities = 57/184 (30%), Positives = 83/184 (45%), Gaps = 10/184 (5%)
Frame = +3
Query: 126 IPQNNDNLEKMTADKESYGDETNQDSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEAC 305
+ ++ D L + TAD+ + D QD VE N +D ++ + G+ + E
Sbjct: 343 VTRDIDELVRETADRLADCD-VGQDRAVE---IRNAEKDVR--LTSWTNSGLHPTILETL 396
Query: 306 EELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALL------ENPQRY 467
+ +K+ IQ IP L G D++G AET +GKT AF LPI+ +L N R
Sbjct: 397 KRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQ 456
Query: 468 ----FALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIAT 635
ALIL PTRELA QI E + + + G D + I+I T
Sbjct: 457 DDGPLALILAPTRELAAQIHEALRTYCQNTDIIVLLSYGQSDRARSLNEIRNGCDILIGT 516
Query: 636 PGKI 647
G+I
Sbjct: 517 CGRI 520
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 67.7 bits (158), Expect = 1e-11
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 9/138 (6%)
Frame = +3
Query: 261 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 440
+F D + + E + + + IQ+ +P+ GKDI+ A+TGSGKT AF LPI+
Sbjct: 299 SFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMS 358
Query: 441 AL-LENPQRYFA--------LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQ 593
L LE Y A +ILTPTRELA QI + ++ + GG+++
Sbjct: 359 RLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYN 418
Query: 594 ALMLSKKPHIIIATPGKI 647
+ K II+ T G++
Sbjct: 419 KSQIMKGCTIIVGTIGRV 436
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 67.7 bits (158), Expect = 1e-11
Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 9/138 (6%)
Frame = +3
Query: 261 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQ 440
+F D + + E + + + IQ+ +P+ GKDI+ A+TGSGKT AF LPI+
Sbjct: 299 SFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMS 358
Query: 441 AL-LENPQRYFA--------LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQ 593
L LE Y A +ILTPTRELA QI + ++ + GG+++
Sbjct: 359 RLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEGRKFSYQSVMEIKPVYGGINVGYN 418
Query: 594 ALMLSKKPHIIIATPGKI 647
+ K II+ T G++
Sbjct: 419 KSQIMKGCTIIVGTIGRV 436
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 67.7 bits (158), Expect = 1e-11
Identities = 31/63 (49%), Positives = 41/63 (65%)
Frame = +3
Query: 264 FKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQA 443
F++ G++ L +A L W P+ +Q EAIP L G D + AETGSGKTGAF+LPI Q
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQI 63
Query: 444 LLE 452
+ E
Sbjct: 64 VWE 66
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = +3
Query: 474 LILTPTRELA---FQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGK 644
+IL PTREL FQ + F ++ S ++C + G +M L I++ TP +
Sbjct: 285 VILEPTRELVQQTFQNIQTFASVLDSPKIRCVTLAAGENMNQILRTLETGCDIVVGTPSR 344
Query: 645 I 647
+
Sbjct: 345 V 345
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 64.9 bits (151), Expect = 7e-11
Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Frame = +3
Query: 258 ITFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPIL 437
+ F D + L E ++PS IQ ++IP ++++ A TGSGKT AFALP++
Sbjct: 126 LRFSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVI 185
Query: 438 QALLE----------NPQRYFALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMV 587
+LE N + A++L PTRELA Q +F A+ + A G +
Sbjct: 186 DEILELKQRADYSSSNSSKLLAVVLEPTRELAAQTYTEFLKYCANTSISAANFSGEETDI 245
Query: 588 AQALMLSKKPHIIIATPGKIGLTTWR 665
A +L P+ I+ KI ++ R
Sbjct: 246 QHADILVSTPNRIVFHLDKIDTSSLR 271
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 62.1 bits (144), Expect = 5e-10
Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 10/179 (5%)
Frame = +3
Query: 141 DNLEKM-TADKESYGDETNQDSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACEELK 317
DN+E++ K S G N+ + E T + TF + + + + +
Sbjct: 512 DNMEEVFNMQKISEGLMFNKFFDAEVKITSDKKPVGVKTCKTFSEANLGETMKKNVAHAG 571
Query: 318 WKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFA-------- 473
+ K + IQ+ +P+ G DI+ A+TGSGKT AF LPI+ L++ A
Sbjct: 572 YTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPR 631
Query: 474 -LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGKI 647
+ILTPTREL QI + ++ + GG+ + + K II+ T G+I
Sbjct: 632 CIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRI 690
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 62.1 bits (144), Expect = 5e-10
Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 10/179 (5%)
Frame = +3
Query: 141 DNLEKM-TADKESYGDETNQDSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACEELK 317
DN+E++ K S G N+ + E T + TF + + + + +
Sbjct: 512 DNMEEVFNMQKISEGLMFNKFFDAEVKITSDKKPVGVKTCKTFSEANLGETMKKNVAHAG 571
Query: 318 WKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFA-------- 473
+ K + IQ+ +P+ G DI+ A+TGSGKT AF LPI+ L++ A
Sbjct: 572 YTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPR 631
Query: 474 -LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGKI 647
+ILTPTREL QI + ++ + GG+ + + K II+ T G+I
Sbjct: 632 CIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRI 690
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 62.1 bits (144), Expect = 5e-10
Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 10/179 (5%)
Frame = +3
Query: 141 DNLEKM-TADKESYGDETNQDSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACEELK 317
DN+E++ K S G N+ + E T + TF + + + + +
Sbjct: 512 DNMEEVFNMQKISEGLMFNKFFDAEVKITSDKKPVGVKTCKTFSEANLGETMKKNVAHAG 571
Query: 318 WKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFA-------- 473
+ K + IQ+ +P+ G DI+ A+TGSGKT AF LPI+ L++ A
Sbjct: 572 YTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPR 631
Query: 474 -LILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGKI 647
+ILTPTREL QI + ++ + GG+ + + K II+ T G+I
Sbjct: 632 CIILTPTRELTDQIYNEGRKFAYQTMMEIRPVYGGLAVGYNKGQIEKGATIIVGTVGRI 690
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 60.5 bits (140), Expect = 2e-09
Identities = 43/132 (32%), Positives = 73/132 (55%), Gaps = 5/132 (3%)
Frame = +3
Query: 261 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLG--KDIIGLAETGSGKTGAFALPI 434
+F++L + + +A + + ++ P++IQ+ A+P+ L+ ++I A++G+GKT AF L +
Sbjct: 210 SFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTM 269
Query: 435 LQALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSK 611
L + N + L PT ELA QI E E +G I +K + G +M A M +
Sbjct: 270 LCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAA---MRGR 326
Query: 612 K--PHIIIATPG 641
K I+I TPG
Sbjct: 327 KLTEQIVIGTPG 338
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 60.5 bits (140), Expect = 2e-09
Identities = 43/132 (32%), Positives = 73/132 (55%), Gaps = 5/132 (3%)
Frame = +3
Query: 261 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLG--KDIIGLAETGSGKTGAFALPI 434
+F++L + + +A + + ++ P++IQ+ A+P+ L+ ++I A++G+GKT AF L +
Sbjct: 235 SFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTM 294
Query: 435 LQALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSK 611
L + N + L PT ELA QI E E +G I +K + G +M A M +
Sbjct: 295 LCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAA---MRGR 351
Query: 612 K--PHIIIATPG 641
K I+I TPG
Sbjct: 352 KLTEQIVIGTPG 363
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical protein
T07D4.4a protein.
Length = 1022
Score = 60.5 bits (140), Expect = 2e-09
Identities = 43/132 (32%), Positives = 73/132 (55%), Gaps = 5/132 (3%)
Frame = +3
Query: 261 TFKDLGVVDVLCEACEELKWKKPSKIQKEAIPVALLG--KDIIGLAETGSGKTGAFALPI 434
+F++L + + +A + + ++ P++IQ+ A+P+ L+ ++I A++G+GKT AF L +
Sbjct: 619 SFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLTM 678
Query: 435 LQALLENPQRYFALILTPTRELAFQISEQFEALGASI-GVKCAVIVGGMDMVAQALMLSK 611
L + N + L PT ELA QI E E +G I +K + G +M A M +
Sbjct: 679 LCRIDVNLMCPQCICLAPTLELAKQIGEVVEKMGKFIDNLKIHYAIKGGNMAA---MRGR 735
Query: 612 K--PHIIIATPG 641
K I+I TPG
Sbjct: 736 KLTEQIVIGTPG 747
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 60.5 bits (140), Expect = 2e-09
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 15/178 (8%)
Frame = +3
Query: 159 TADKESYGDETNQDSEVE--QTPTENVTEDTEDDKITFKDLGVVDV-LCEACEELKWKKP 329
T D + + D N D +++ Q + + D +F ++ L + + +K +P
Sbjct: 700 TPDDKMFEDAVNNDDKIDFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRP 759
Query: 330 SKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQR----------YFALI 479
+ IQ+ + + G D++ A TGSGKT AF +P + L+E ++ LI
Sbjct: 760 TPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLI 819
Query: 480 LTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVA--QALMLSKKPHIIIATPGKI 647
+ PTREL Q L G+KC + GG A Q L + +I++AT G++
Sbjct: 820 VAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRL 877
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 60.5 bits (140), Expect = 2e-09
Identities = 48/178 (26%), Positives = 82/178 (46%), Gaps = 15/178 (8%)
Frame = +3
Query: 159 TADKESYGDETNQDSEVE--QTPTENVTEDTEDDKITFKDLGVVDV-LCEACEELKWKKP 329
T D + + D N D +++ Q + + D +F ++ L + + +K +P
Sbjct: 700 TPDDKMFEDAVNNDDKIDFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRP 759
Query: 330 SKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQR----------YFALI 479
+ IQ+ + + G D++ A TGSGKT AF +P + L+E ++ LI
Sbjct: 760 TPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLI 819
Query: 480 LTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVA--QALMLSKKPHIIIATPGKI 647
+ PTREL Q L G+KC + GG A Q L + +I++AT G++
Sbjct: 820 VAPTRELVNQTFTTARQLTYETGLKCGLAFGGYSRNANVQHLRSFSQLNILVATMGRL 877
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 58.8 bits (136), Expect = 5e-09
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 3/110 (2%)
Frame = +3
Query: 327 PSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYF-ALILTPTRELA 503
PS + P L +D+ A TGSGKT + LP+L A+ P + A+IL P + L
Sbjct: 142 PSLFFEIRSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLV 201
Query: 504 FQISEQFEALGASIGV-KCAVIVGGMDMVAQALML-SKKPHIIIATPGKI 647
QI ++F+ GV K + G D +A L S P++I+ATP ++
Sbjct: 202 AQIVDEFKRWNDESGVAKVVSLSGANDFEKEARQLASDPPNVIVATPARL 251
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 57.2 bits (132), Expect = 1e-08
Identities = 34/107 (31%), Positives = 55/107 (51%)
Frame = +3
Query: 318 WKKPSKIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRE 497
++KPS IQK A+ GKD+ ++ GSGKT + ILQ + ++L P R
Sbjct: 16 FEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCEDAHLQVILLAPQRG 75
Query: 498 LAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATP 638
+A + EQ ++LG ++ V + G D A+ K H+++ TP
Sbjct: 76 MAQRAHEQLKSLGRNLNVNATCL--GFDTTAEN---DKISHVLMGTP 117
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 54.8 bits (126), Expect = 8e-08
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Frame = +3
Query: 375 DIIGLAETGSGKTGAFALPILQALLE---NPQRYFALILTPTRELAFQISEQFEALGASI 545
D++ + TGSGKT AF LP+++ + P ALIL+P+REL QI + +
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVIQPFAEKL 107
Query: 546 GVKCAVIVGGMDMVAQALML-SKKPHIIIATPGKI 647
+ + GG + M +K +I++ATPG++
Sbjct: 108 NLTVETVTGGQKVDKNIKMFKNKNVNILVATPGRL 142
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 39.1 bits (87), Expect = 0.004
Identities = 25/80 (31%), Positives = 41/80 (51%)
Frame = +3
Query: 333 KIQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQI 512
++Q+ +I V G+ ++ A TG GKT AF +P ++A LEN Q P+ +
Sbjct: 18 RVQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIEAALENRQSNCFESTKPSPSILIMA 77
Query: 513 SEQFEALGASIGVKCAVIVG 572
S AL + +C +I+G
Sbjct: 78 ST--SALVDQLFNRCELILG 95
>AF480439-1|AAM76083.1| 1037|Caenorhabditis elegans dicer-related
helicase protein.
Length = 1037
Score = 38.3 bits (85), Expect = 0.007
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 5/108 (4%)
Frame = +3
Query: 339 QKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLEN----PQRYFALILTPTRELAF 506
Q+E VAL GK+ I A TGSGKT A I++ E+ +R+ AL +TP +
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKT-VIAANIIKEHFESRSSEGKRFKALFMTPNSMI-- 353
Query: 507 QISEQFEALGASIG-VKCAVIVGGMDMVAQALMLSKKPHIIIATPGKI 647
+++Q ++ + + V I+ G D V ++ K +I+ATP I
Sbjct: 354 -LNQQAASISSYLDHVYHTQIIQGSDNVPTRNVIQSK-DLIVATPQMI 399
>AF036696-4|AAB88350.1| 1037|Caenorhabditis elegans Dicer related
helicase protein 1 protein.
Length = 1037
Score = 38.3 bits (85), Expect = 0.007
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 5/108 (4%)
Frame = +3
Query: 339 QKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLEN----PQRYFALILTPTRELAF 506
Q+E VAL GK+ I A TGSGKT A I++ E+ +R+ AL +TP +
Sbjct: 297 QEELCQVALQGKNTIVTAPTGSGKT-VIAANIIKEHFESRSSEGKRFKALFMTPNSMI-- 353
Query: 507 QISEQFEALGASIG-VKCAVIVGGMDMVAQALMLSKKPHIIIATPGKI 647
+++Q ++ + + V I+ G D V ++ K +I+ATP I
Sbjct: 354 -LNQQAASISSYLDHVYHTQIIQGSDNVPTRNVIQSK-DLIVATPQMI 399
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 37.5 bits (83), Expect = 0.012
Identities = 17/59 (28%), Positives = 34/59 (57%)
Frame = +3
Query: 471 ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGKI 647
A+I+ PT+EL QI + F L ++ A+ + ++ ++ L + H+++ TPGK+
Sbjct: 99 AVIIAPTKELITQIYKLFVKLSQALPFLQAINLCDINEEENSVWLEDRSHVVVTTPGKL 157
>U58729-3|AAM54204.1| 955|Caenorhabditis elegans Hypothetical
protein F02G3.1c protein.
Length = 955
Score = 33.1 bits (72), Expect = 0.27
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = +3
Query: 129 PQNNDNLEKMTADKESYGDETNQDSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACE 308
P++N++ E T + S +ET+ EVE ENV + E+D + +D G D E E
Sbjct: 390 PESNESEEVTTTSENS--EETSTQDEVELKSAENVND--EEDHTSQQDDGEQD---EQEE 442
Query: 309 ELKWKK 326
KWK+
Sbjct: 443 SKKWKR 448
>U58729-2|AAM54203.1| 913|Caenorhabditis elegans Hypothetical
protein F02G3.1b protein.
Length = 913
Score = 33.1 bits (72), Expect = 0.27
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = +3
Query: 129 PQNNDNLEKMTADKESYGDETNQDSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACE 308
P++N++ E T + S +ET+ EVE ENV + E+D + +D G D E E
Sbjct: 363 PESNESEEVTTTSENS--EETSTQDEVELKSAENVND--EEDHTSQQDDGEQD---EQEE 415
Query: 309 ELKWKK 326
KWK+
Sbjct: 416 SKKWKR 421
>U58729-1|AAM54202.1| 928|Caenorhabditis elegans Hypothetical
protein F02G3.1a protein.
Length = 928
Score = 33.1 bits (72), Expect = 0.27
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = +3
Query: 129 PQNNDNLEKMTADKESYGDETNQDSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACE 308
P++N++ E T + S +ET+ EVE ENV + E+D + +D G D E E
Sbjct: 363 PESNESEEVTTTSENS--EETSTQDEVELKSAENVND--EEDHTSQQDDGEQD---EQEE 415
Query: 309 ELKWKK 326
KWK+
Sbjct: 416 SKKWKR 421
>AF456360-1|AAL60231.1| 928|Caenorhabditis elegans immunoglobulin
domain-containingprotein F02G3.1 protein.
Length = 928
Score = 33.1 bits (72), Expect = 0.27
Identities = 23/66 (34%), Positives = 35/66 (53%)
Frame = +3
Query: 129 PQNNDNLEKMTADKESYGDETNQDSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACE 308
P++N++ E T + S +ET+ EVE ENV + E+D + +D G D E E
Sbjct: 363 PESNESEEVTTTSENS--EETSTQDEVELKSAENVND--EEDHTSQQDDGEQD---EQEE 415
Query: 309 ELKWKK 326
KWK+
Sbjct: 416 SKKWKR 421
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 31.9 bits (69), Expect = 0.62
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 9/123 (7%)
Frame = +3
Query: 318 WKKPSKIQKEAIPVALLGKDIIGL-AETGSGKTGAFALPILQA----LLENP----QRYF 470
+K ++IQ AL K+ + L A TG+GKT L +LQ L E+ +
Sbjct: 472 YKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVALLTMLQEIGNHLAEDGSVKLDEFK 531
Query: 471 ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGKIG 650
+ + P + L ++ F A G+ + G M + M ++ +I+ TP K
Sbjct: 532 IVYIAPMKSLVQEMVGSFSKRLAPFGITVGEMTGDAQMSKEQFMATQ---VIVCTPEKYD 588
Query: 651 LTT 659
+ T
Sbjct: 589 VVT 591
>Z46676-3|CAA86663.1| 1244|Caenorhabditis elegans Hypothetical protein
C08B11.3 protein.
Length = 1244
Score = 31.1 bits (67), Expect = 1.1
Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
Frame = +3
Query: 75 HTLQISNTCF-QYSRLFCIPQNNDNLEKMTADKESYGDETNQDSEVEQTPTENV--TEDT 245
H + ++ C R+ + ND +++ + E +ETN++ E TE V +++
Sbjct: 871 HIVAVAAACNGDLERMNVVSNGNDIEKEIEKETEKVEEETNEEKNKEVVETEVVDDAQES 930
Query: 246 EDDKITFKDLGVVDVLCE-ACEELKWKKPSKIQK 344
E K D +C+ C + + PS + K
Sbjct: 931 EKRKCVPPSSNPTDYMCDWDCCSIYYASPSHVLK 964
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 135 NNDNLEKMTADKESYGDETNQDSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACE-E 311
N DN+ ++ ++ +ET ++ E Q E E TE+ KI K + + C + E E
Sbjct: 2182 NLDNMVALSKERRKENNETQEEEEQIQKRVEEFKESTEEQKIQ-KSIELTKEECTSDEKE 2240
Query: 312 LK 317
LK
Sbjct: 2241 LK 2242
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 135 NNDNLEKMTADKESYGDETNQDSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACE-E 311
N DN+ ++ ++ +ET ++ E Q E E TE+ KI K + + C + E E
Sbjct: 2182 NLDNMVALSKERRKENNETQEEEEQIQKRVEEFKESTEEQKIQ-KSIELTKEECTSDEKE 2240
Query: 312 LK 317
LK
Sbjct: 2241 LK 2242
>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
protein Y46G5A.6 protein.
Length = 1002
Score = 30.7 bits (66), Expect = 1.4
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 9/123 (7%)
Frame = +3
Query: 318 WKKPSKIQKEAIPVALLGKDIIGL-AETGSGKTGAFALPILQA----LLENP----QRYF 470
+K ++IQ AL K+ + L A TG+GKT L +LQ L E+ + +
Sbjct: 274 YKSLNRIQSRLCDSALRSKEHLLLCAPTGAGKTNVGLLTMLQEIGNHLAEDGSVKLEEFK 333
Query: 471 ALILTPTRELAFQISEQFEALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGKIG 650
+ + PT+ L ++ F A G+ + G M+ + M ++ +I+ TP K
Sbjct: 334 IVYIAPTKSLVQEMVGSFSKRLAPFGITVGEMTGQMN--KEQFMATQ---VIVCTPEKYD 388
Query: 651 LTT 659
+ T
Sbjct: 389 VVT 391
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/83 (25%), Positives = 40/83 (48%)
Frame = +3
Query: 336 IQKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQIS 515
+Q+++I + ++ A TG GKT AF +P ++ L + TP+ + I
Sbjct: 118 VQQKSIQAIRDRRGLLVDAPTGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTIL--IL 175
Query: 516 EQFEALGASIGVKCAVIVGGMDM 584
+L + +C V++G +DM
Sbjct: 176 ANTNSLVEQLFNRCEVLLGLIDM 198
>AF026215-8|AAB71317.1| 415|Caenorhabditis elegans Hypothetical
protein F09G2.9 protein.
Length = 415
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +3
Query: 132 QNND-NLEKMTADKESYGDETNQDSEVEQTPTENVTEDTEDDKITFKDLGVVDVLCEACE 308
+N D N+EK T + + + + +TP VTE +D+K +V EA +
Sbjct: 45 ENGDTNIEKKTEEPVVEAKVSEEPATTSETPAAQVTESQKDEKTDDAPAEPAEVAVEAAK 104
Query: 309 E 311
E
Sbjct: 105 E 105
>AF101305-8|AAF98599.1| 534|Caenorhabditis elegans Hypothetical
protein C04F5.9 protein.
Length = 534
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +2
Query: 632 HSREDWVDHLENTKGFNLRALKYLVMDEAGXNSPHGFS 745
+ + W++ EN K NL+ +K +D+ PHG++
Sbjct: 342 NEKSTWIELFENKKAANLKFIKEF-LDQIDRRKPHGYA 378
>Z81523-2|CAB04248.1| 928|Caenorhabditis elegans Hypothetical
protein F32H2.1b protein.
Length = 928
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/76 (30%), Positives = 32/76 (42%)
Frame = +2
Query: 554 MCSNSWRYGHGGTSSNAVQETSHNHRHSREDWVDHLENTKGFNLRALKYLVMDEAGXNSP 733
+C+ S RYG + A + N RE W + L + N R LV DE +
Sbjct: 368 VCAVS-RYGAKDWAKVAQAVQNRNDSQCRERWTNVLNRSAHVNERFT--LVEDEQLLYAV 424
Query: 734 HGFSKWKWTKFSVLIP 781
F K W K +L+P
Sbjct: 425 KVFGKGNWAKCQMLLP 440
>Z81523-1|CAB04241.1| 944|Caenorhabditis elegans Hypothetical
protein F32H2.1a protein.
Length = 944
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/76 (30%), Positives = 32/76 (42%)
Frame = +2
Query: 554 MCSNSWRYGHGGTSSNAVQETSHNHRHSREDWVDHLENTKGFNLRALKYLVMDEAGXNSP 733
+C+ S RYG + A + N RE W + L + N R LV DE +
Sbjct: 368 VCAVS-RYGAKDWAKVAQAVQNRNDSQCRERWTNVLNRSAHVNERFT--LVEDEQLLYAV 424
Query: 734 HGFSKWKWTKFSVLIP 781
F K W K +L+P
Sbjct: 425 KVFGKGNWAKCQMLLP 440
>Z83123-10|CAB05609.2| 988|Caenorhabditis elegans Hypothetical
protein T04A11.6 protein.
Length = 988
Score = 28.3 bits (60), Expect = 7.6
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Frame = +3
Query: 339 QKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISE 518
QK+ I L+G D L TG+GK+ + LP + +L ++++P R L I +
Sbjct: 252 QKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAV--ILPG----VTVVVSPLRSL---IED 302
Query: 519 QFEALGASIGVKCAVIVGGMDMVAQ----ALMLSKKPHI--IIATPGKI 647
Q + +G+ C + + AQ A + S P I + TP KI
Sbjct: 303 QKMKM-KELGIGCEALTADLGAPAQEKIYAELGSGNPSIKLLYVTPEKI 350
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 28.3 bits (60), Expect = 7.6
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 339 QKEAIPVALLGKDIIGLAETGSGKT 413
Q+E + AL GK+ + +A TGSGKT
Sbjct: 375 QEELVQPALEGKNCVIVAPTGSGKT 399
>Z68317-4|CAA92688.1| 486|Caenorhabditis elegans Hypothetical
protein T01H3.4 protein.
Length = 486
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +3
Query: 84 QISNTCFQYSRL--FCIPQNNDNLEKMTADKESYGDETNQDSEVEQTPTENVTEDTE 248
Q S F+ S+L + I + ++NLE A + + DSE + EN+TE+ E
Sbjct: 248 QESERVFEKSKLELYAIKEEDENLEGYRARHNTVRTSIDVDSESKTDIDENLTEEGE 304
>U80437-19|AAB37630.2| 580|Caenorhabditis elegans Conserved
oligomeric golgi (cog)component protein 5 protein.
Length = 580
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +3
Query: 129 PQNNDNLEKMTADKESYGDETN--QDSEVEQTPTENV-TEDTEDDKI 260
P ++++EK +KE GDE + D E EQ E++ ED +++K+
Sbjct: 209 PDRDESIEKQP-EKEDDGDELDYGDDEEKEQKDDESMDAEDAKEEKV 254
>U42831-1|AAA83513.2| 614|Caenorhabditis elegans Hypothetical
protein R11B5.1 protein.
Length = 614
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -3
Query: 562 TAHFTPMLAPSASNCSDI*NASSLVGVSISAKYLCGFSNS 443
TA+ TP LAPSA+ C D L +S++ + C S+S
Sbjct: 95 TANGTPALAPSAAKCLD----EPLCSLSLNTRADCSSSSS 130
>AY095296-1|AAM26298.1| 988|Caenorhabditis elegans RecQ helicase
protein.
Length = 988
Score = 28.3 bits (60), Expect = 7.6
Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 6/109 (5%)
Frame = +3
Query: 339 QKEAIPVALLGKDIIGLAETGSGKTGAFALPILQALLENPQRYFALILTPTRELAFQISE 518
QK+ I L+G D L TG+GK+ + LP + +L ++++P R L I +
Sbjct: 252 QKQCILSTLMGHDTFVLMPTGAGKSLCYQLPAV--ILPG----VTVVVSPLRSL---IED 302
Query: 519 QFEALGASIGVKCAVIVGGMDMVAQ----ALMLSKKPHI--IIATPGKI 647
Q + +G+ C + + AQ A + S P I + TP KI
Sbjct: 303 QKMKM-KELGIGCEALTADLGAPAQEKIYAELGSGNPSIKLLYVTPEKI 350
>AL032646-5|CAA21682.1| 1798|Caenorhabditis elegans Hypothetical
protein Y54E2A.6 protein.
Length = 1798
Score = 28.3 bits (60), Expect = 7.6
Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 8/110 (7%)
Frame = +3
Query: 372 KDIIGLAETGSGKTGAFALPILQALLENPQR--------YFALILTPTRELAFQISEQFE 527
++++ A TG+GKT L IL + E+ + + + P + LA +++E F
Sbjct: 109 ENLLICAPTGAGKTNIAMLTILNTIHEHQNSRGDIMKDDFKIIYIAPMKALATEMTESFG 168
Query: 528 ALGASIGVKCAVIVGGMDMVAQALMLSKKPHIIIATPGKIGLTTWRIPRD 677
A +G+K + G + + +++ TP K + T + D
Sbjct: 169 KRLAPLGLKVKELTGDTQLSRNEV---ADTQMLVLTPEKWDVITRKSTSD 215
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,018,102
Number of Sequences: 27780
Number of extensions: 449063
Number of successful extensions: 1637
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 1460
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1594
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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