Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_C16
(847 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 49 6e-08
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 48 1e-07
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 44 1e-06
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 44 1e-06
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 43 4e-06
AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic ac... 42 9e-06
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 41 1e-05
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 41 1e-05
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 41 1e-05
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 41 1e-05
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 41 1e-05
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 41 1e-05
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 41 1e-05
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 41 1e-05
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 40 3e-05
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 40 3e-05
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 40 4e-05
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 39 5e-05
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 39 7e-05
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 37 2e-04
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 35 0.001
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 34 0.001
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 31 0.013
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 29 0.071
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 28 0.094
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 28 0.12
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 27 0.22
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 27 0.22
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 27 0.22
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 27 0.29
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 24 1.5
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 24 1.5
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 24 1.5
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 24 1.5
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 24 1.5
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 4.7
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 48.8 bits (111), Expect = 6e-08
Identities = 35/105 (33%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Frame = +2
Query: 113 IASAAECENATSLSLMIDSLLATYDRDSPPDSK----IVVNLTLHLRHA---NIRESEST 271
I SA C + D LL+ Y+R P S +VV L L L N+++ T
Sbjct: 9 ILSARICHGNPDAKRLYDDLLSNYNRLIRPVSNNNDTVVVKLGLRLSQLIDLNLKDQILT 68
Query: 272 VRIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 403
+ L+ W D + W+ E+G T L V SE +W PD+VL N
Sbjct: 69 TNVW--LEHEWQDHKFQWDPAEYGGVTELYVPSEHIWLPDIVLYN 111
Score = 30.3 bits (65), Expect = 0.023
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +3
Query: 438 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMD 590
+A + G V W + + + +P D QTC KFGS ++ ++D
Sbjct: 124 KAILHYTGKVLWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGIQID 174
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 48.0 bits (109), Expect = 1e-07
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Frame = +2
Query: 131 CENATSLSLMIDS---LLATYDRDSPPDSKIV--VNLTLHLRHANIRESESTVRIQADLQ 295
C++ TS S + L YDRD P+ K ++ L ++H N+ E TV L+
Sbjct: 28 CKDITSTSALYRLKLYLFCDYDRDIIPEQKNATKIDFGLSIQHYNVDEYSHTVDFHVMLK 87
Query: 296 MNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVL 397
+ W L+W + E+ ++ V S +W PD+V+
Sbjct: 88 LMWEQSHLTWKSSEFDSINSIRVKSYEIWVPDIVM 122
Score = 26.2 bits (55), Expect = 0.38
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 522 WPNDMQTCTFKFGSXMHNSDEM 587
WP D+ CT S H S+E+
Sbjct: 166 WPYDILNCTIHIASWSHGSNEI 187
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 44.4 bits (100), Expect = 1e-06
Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Frame = +2
Query: 137 NATSLSLMIDSLLATYDRDSPPD---SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNW 304
N +++S ++D+LL YD PD V + + +R I E + T + + +W
Sbjct: 2 NHSNISELLDNLLRGYDNSVRPDFGGPPATVEVDIMVRSMGPISEVDMTYSMDCYFRQSW 61
Query: 305 IDKRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 403
+D+RL++ G+ + + R+W+PD N
Sbjct: 62 VDRRLAFQGGKETLALSISMLARIWKPDTYFYN 94
Score = 35.1 bits (77), Expect = 8e-04
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +3
Query: 444 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 563
R+ +G V + RL I M L+N+P D Q C +FGS
Sbjct: 111 RLYQDGRVLYSSRLTIKAGCPMNLENFPMDTQRCPLQFGS 150
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 44.4 bits (100), Expect = 1e-06
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 8/108 (7%)
Frame = +2
Query: 104 TCAIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRH---ANIRES 262
+C +A + + D LL+ Y+R P ++ V + L L N++
Sbjct: 6 SCLVAPFPGASANSEAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQ 65
Query: 263 ESTVRIQADLQMNWIDKRLSWNAGEWG-CSTWLVSSERLWRPDVVLLN 403
T + ++ W D +L WN ++G T V SE +W PD+VL N
Sbjct: 66 IMTTNVW--VEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYN 111
Score = 28.7 bits (61), Expect = 0.071
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 438 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMD 590
+A + + G V W + + ++ +P D QTC KFGS ++ +D
Sbjct: 124 KAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYTVD 174
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 42.7 bits (96), Expect = 4e-06
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 8/99 (8%)
Frame = +2
Query: 131 CENATSLSLMIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQAD 289
C + D LL+ Y++ P + LT+ ++ N++ T +
Sbjct: 19 CSGNPDAKRLYDDLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNLKNQIMTTNLW-- 76
Query: 290 LQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 403
++ +W D +L W+ E+G L V S+ +WRPD+VL N
Sbjct: 77 VEQSWYDYKLKWDPKEYGGVEMLHVPSDHIWRPDIVLYN 115
Score = 33.9 bits (74), Expect = 0.002
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +3
Query: 432 ALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMD 590
A +A ++ G V W + + ++ +P D QTC KFGS ++ ++D
Sbjct: 126 ATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVD 178
>AF514804-1|AAM51823.1| 537|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha-3 protein.
Length = 537
Score = 41.5 bits (93), Expect = 9e-06
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Frame = +2
Query: 158 MIDSLLATYDRDSPPDSKIVVNLTLHLR-------HANIRESESTVRIQADLQMNWIDKR 316
+ D LL+ Y+R P LT+ L N++ T + ++ W D +
Sbjct: 37 LYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLKNQVMTTNVW--VEQRWNDYK 94
Query: 317 LSWNAGEWGCSTWL-VSSERLWRPDVVLLN 403
L WN E+G L V SE +W PD+VL N
Sbjct: 95 LKWNPEEYGGVEMLYVPSENIWLPDIVLYN 124
Score = 34.7 bits (76), Expect = 0.001
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 438 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMD 590
+A + G VSW + + ++ +P D Q+C KFGS +N ++D
Sbjct: 137 KATLKYTGDVSWKPPAIYKSSCEINVEYFPFDEQSCIMKFGSWTYNGAQVD 187
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 41.1 bits (92), Expect = 1e-05
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 248 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYN 77
Score = 30.3 bits (65), Expect = 0.023
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 423 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMD 590
G Y V+++GS ++ + M + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDVAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 41.1 bits (92), Expect = 1e-05
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 248 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYN 77
Score = 29.1 bits (62), Expect = 0.054
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +3
Query: 423 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMD 590
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 41.1 bits (92), Expect = 1e-05
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 248 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYN 77
Score = 29.5 bits (63), Expect = 0.041
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +3
Query: 423 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMD 590
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 41.1 bits (92), Expect = 1e-05
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 248 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYN 77
Score = 29.1 bits (62), Expect = 0.054
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +3
Query: 423 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMD 590
G Y V+++GS ++ + + + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFGSTCKIDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 41.1 bits (92), Expect = 1e-05
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 248 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYN 77
Score = 30.7 bits (66), Expect = 0.018
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 423 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMD 590
G Y V+++GS ++ + M + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHDGSCLYVPPGIFKSTCKMDIAWFPFDDQHCDMKFGSWTYDGNQVD 140
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 41.1 bits (92), Expect = 1e-05
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 248 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N
Sbjct: 25 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYN 77
Score = 31.5 bits (68), Expect = 0.010
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 423 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMD 590
G Y V++NGS ++ + + + +P D Q C KFGS ++ +++D
Sbjct: 85 GTYQTSVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 140
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 41.1 bits (92), Expect = 1e-05
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 248 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYN 145
Score = 31.9 bits (69), Expect = 0.008
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 423 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMD 590
G Y V++NGS ++ + + + +P D Q C KFGS ++ +++D
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 41.1 bits (92), Expect = 1e-05
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 248 NIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 403
++ E + A L++ W+D L WN E+ G ++ +LW+PD+++ N
Sbjct: 93 DVDEKNQILTTNAWLKLEWVDYNLQWNESEYGGVKDLRITPNKLWKPDILMYN 145
Score = 31.9 bits (69), Expect = 0.008
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 423 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMD 590
G Y V++NGS ++ + + + +P D Q C KFGS ++ +++D
Sbjct: 153 GTYQTNVVVTHNGSCLYVPPGIFKSTCKIDITWFPFDDQHCDMKFGSWTYDGNQVD 208
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 39.9 bits (89), Expect = 3e-05
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Frame = +2
Query: 158 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 322
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 323 WNAGEWGCSTWL-VSSERLWRPDVVLLN 403
W E+G L V S+ +WRPD+VL N
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYN 119
Score = 31.9 bits (69), Expect = 0.008
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +3
Query: 438 RARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMD 590
+A V +G V W + S+ ++ +P D+QTC K GS ++ ++D
Sbjct: 132 KATVYYSGLVVWQPPAVYKSSCSIDVEFFPYDVQTCVLKLGSWTYDGFKVD 182
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 39.9 bits (89), Expect = 3e-05
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Frame = +2
Query: 158 MIDSLLATYDRDSPP--DSKIVVNLTLHLRHANIRESESTVRIQAD---LQMNWIDKRLS 322
+ D LL+ Y++ P ++ V+ + + L+ + + + +I ++ +W D +L
Sbjct: 32 LYDDLLSNYNKLVRPVVNTSDVLRVCIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLR 91
Query: 323 WNAGEWGCSTWL-VSSERLWRPDVVLLN 403
W E+G L V S+ +WRPD+VL N
Sbjct: 92 WEPKEYGGVKMLHVPSDHIWRPDIVLYN 119
Score = 33.9 bits (74), Expect = 0.002
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +3
Query: 432 ALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMD 590
A +A + + G V W + + ++ +P D QTC KFGS ++ ++D
Sbjct: 130 ATKATIYHQGLVEWKPPAIYKSSCEIDVEYFPFDEQTCVLKFGSWTYDGFKVD 182
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 39.5 bits (88), Expect = 4e-05
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Frame = +2
Query: 212 IVVNLTLHLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWRPD 388
+V L+LH ++ E + + W D L WNA E+ G V R+WRPD
Sbjct: 33 VVFGLSLH-HIIDVDEKNQILTTNCWVTQIWTDHHLKWNASEFAGIRVIRVPYNRVWRPD 91
Query: 389 VVLLN 403
+L N
Sbjct: 92 TILYN 96
Score = 27.5 bits (58), Expect = 0.16
Identities = 11/48 (22%), Positives = 24/48 (50%)
Frame = +3
Query: 447 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMD 590
VS+ G V W+ + + ++ +P D Q C K+ S ++ +++
Sbjct: 113 VSHTGEVVWLSHGIFRSSCDIDVEFFPFDEQRCVLKWASWTYDGYQLE 160
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 39.1 bits (87), Expect = 5e-05
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +3
Query: 447 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMDSXIDK 605
V ++GSVS + + + +WP D C FGS +H+ +E++ +DK
Sbjct: 151 VFSSGSVSCVPSVKHVAKCATDFSSWPYDTHRCRINFGSWVHSGEEVNIFLDK 203
Score = 35.9 bits (79), Expect = 5e-04
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Frame = +2
Query: 134 ENATSLSLMIDSLLATYDRDSPPDS--KIVVNLTLHL--RHANIRESESTVRIQADLQMN 301
++ T+L + L YD + P S +I N+T+ L + + S + + + + +
Sbjct: 39 DHPTTLLKLKRYLFCEYDPNVRPISSHQIANNVTMQLLPKLMEFDDWTSVMELHSWMTLM 98
Query: 302 WIDKRLSWNAGEW-GCSTWLVSSERLWRPDVVLLN 403
W D LSW ++ G + V S+ +W PD+ + N
Sbjct: 99 WTDSHLSWKPSDFDGINYIYVKSDDIWVPDISVYN 133
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 38.7 bits (86), Expect = 7e-05
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +2
Query: 209 KIVVNLTL-HLRHANIRESESTVRIQADLQMNWIDKRLSWNAGEW-GCSTWLVSSERLWR 382
K+ VN L ++ N+ E ++ L+ W D +L W+ ++ G + +++W+
Sbjct: 51 KVHVNFGLAFVQLINVNEKNQIMKSNVWLRFIWTDYQLQWDEADYGGIGVLRLPPDKVWK 110
Query: 383 PDVVLLN 403
PD+VL N
Sbjct: 111 PDIVLFN 117
Score = 37.1 bits (82), Expect = 2e-04
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +3
Query: 429 YALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEM 587
Y + NG V W+ + ++ + +P D QTC KFGS N D++
Sbjct: 127 YKSNVLIYPNGDVLWVPPAIYQSSCTIDVTYFPFDQQTCIMKFGSWTFNGDQV 179
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 37.1 bits (82), Expect = 2e-04
Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 6/104 (5%)
Frame = +2
Query: 110 AIASAAECENATSLSLMIDSLLATYDRDSPP----DSKIVVNLTLHLRHA-NIRESESTV 274
A+A++ + +++ LL TY+ P +V++ L L ++ E +
Sbjct: 11 ALAASGLVNGGSHEKRLLNDLLDTYNVLERPVGNESEPLVLSFGLTLMQIIDVDEKNQLL 70
Query: 275 RIQADLQMNWIDKRLSWNAGEWGCSTWL-VSSERLWRPDVVLLN 403
L++ W D + WN ++G L + RLW+PDV++ N
Sbjct: 71 ITNLWLKLEWNDVNMRWNVSDYGGVRDLRIPPHRLWKPDVLMYN 114
Score = 31.5 bits (68), Expect = 0.010
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +3
Query: 423 GDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEMD 590
G Y V NNG+ ++ + + + +P D Q C KFGS ++ ++D
Sbjct: 122 GTYPTNVVVKNNGTCLYVPPGIFKSTCKIDITWFPFDDQRCEMKFGSWTYDGFQLD 177
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 34.7 bits (76), Expect = 0.001
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 9/91 (9%)
Frame = +2
Query: 158 MIDSLLATYDRDSPP------DSKIVVNLTLHLRH-ANIRESESTVRIQADLQMNWIDKR 316
++D++L YD P D +V + L +R A I + + +Q + W+D+R
Sbjct: 35 VLDNILGGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQLTFREQWLDER 94
Query: 317 LSWN--AGEWGCSTWLVSSERLWRPDVVLLN 403
L +N G T L + R+W PD+ N
Sbjct: 95 LRFNDFGGRLKYLT-LTDASRVWMPDLFFSN 124
Score = 31.1 bits (67), Expect = 0.013
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 444 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEM 587
R+ NGSV + R+ ++ M L +P D Q C+ + S +D++
Sbjct: 141 RIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDL 188
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 34.3 bits (75), Expect = 0.001
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Frame = +2
Query: 146 SLSLMIDSLLATYDRDSPPD----SKIVVNLTLHLRHAN-IRESESTVRIQADLQMNWID 310
++++++++LL Y+ + P + VV + +R + E + + + +W D
Sbjct: 36 NITMVLENLLMNYENNQLPTHGKGTPTVVKTNILIRSMGPVSELDMDYSMDCYFRQSWRD 95
Query: 311 KRLSWNAGEWGCSTWLVSSERLWRPDVVLLN 403
RLS+ S + ER+WRPD N
Sbjct: 96 SRLSFLGPIKSLSLSIKMLERIWRPDTYFYN 126
Score = 34.3 bits (75), Expect = 0.001
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 444 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 563
R+S +G + + RL I M+L N+P D Q+C GS
Sbjct: 143 RISQDGDILYSMRLTIKAKCPMELRNFPMDRQSCPLILGS 182
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 31.1 bits (67), Expect = 0.013
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 444 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEM 587
R+ NGSV + R+ ++ M L +P D Q C+ + S +D++
Sbjct: 141 RIFPNGSVLYSIRISLTLSCPMNLKLYPLDRQVCSLRMASYGWTTDDL 188
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 28.7 bits (61), Expect = 0.071
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 444 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 563
R+S +GSV++ R + M L +P D Q CT + S
Sbjct: 142 RLSGDGSVTYGMRFTTTLACMMDLHYYPLDSQNCTVEIES 181
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 28.3 bits (60), Expect = 0.094
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +3
Query: 447 VSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEM 587
+ +G V RL + ++L+ +P D+Q C F S HN +M
Sbjct: 124 IDPSGMVRLNTRLQATLNCGLRLEKFPFDVQECPLIFESWTHNVLDM 170
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 27.9 bits (59), Expect = 0.12
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +3
Query: 462 SVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEM 587
++ ++ +L + +M +P+D Q C + S H +DEM
Sbjct: 150 TILYMVKLTLKLSCAMNFLIYPHDTQECKLQMESLSHTTDEM 191
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 27.1 bits (57), Expect = 0.22
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 444 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 563
R+ ++GS++ RL I+ M L +P D Q C + S
Sbjct: 119 RIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 27.1 bits (57), Expect = 0.22
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 444 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 563
R+ ++GS++ RL I+ M L +P D Q C + S
Sbjct: 119 RIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 158
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 27.1 bits (57), Expect = 0.22
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +3
Query: 444 RVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 563
R+ ++GS++ RL I+ M L +P D Q C + S
Sbjct: 58 RIHHSGSITRSIRLTITASCPMNLQYFPMDRQLCHIEIES 97
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 26.6 bits (56), Expect = 0.29
Identities = 8/39 (20%), Positives = 22/39 (56%)
Frame = +3
Query: 471 WIKRLDISTPISMQLDNWPNDMQTCTFKFGSXMHNSDEM 587
++ +L + +M+ +++P+D Q C+ S H + ++
Sbjct: 122 YMSKLTLVLSCAMKFESYPHDTQICSMMIESLSHTTQDL 160
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 24.2 bits (50), Expect = 1.5
Identities = 11/32 (34%), Positives = 11/32 (34%)
Frame = -2
Query: 822 PGGXRPXXQXXXPPPXTXXXRPPXPXPGGGXP 727
PG RP PP R P PG P
Sbjct: 98 PGNNRPVYIPQPRPPHPRLRREPEAEPGNNRP 129
Score = 24.2 bits (50), Expect = 1.5
Identities = 11/32 (34%), Positives = 11/32 (34%)
Frame = -2
Query: 822 PGGXRPXXQXXXPPPXTXXXRPPXPXPGGGXP 727
PG RP PP R P PG P
Sbjct: 124 PGNNRPVYIPQPRPPHPRLRREPEAEPGNNRP 155
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 24.2 bits (50), Expect = 1.5
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 420 PGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 563
P +ALR + NG+V+++ R + +L+ +P D C+F S
Sbjct: 161 PVHFALR--IYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 24.2 bits (50), Expect = 1.5
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 420 PGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 563
P +ALR + NG+V+++ R + +L+ +P D C+F S
Sbjct: 161 PVHFALR--IYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 24.2 bits (50), Expect = 1.5
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 420 PGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 563
P +ALR + NG+V+++ R + +L+ +P D C+F S
Sbjct: 212 PVHFALR--IYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 257
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 24.2 bits (50), Expect = 1.5
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +3
Query: 420 PGDYALRARVSNNGSVSWIKRLDISTPISMQLDNWPNDMQTCTFKFGS 563
P +ALR + NG+V+++ R + +L+ +P D C+F S
Sbjct: 161 PVHFALR--IYRNGTVNYLMRRHLILSCQGRLNIFPFDDPLCSFAIES 206
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.6 bits (46), Expect = 4.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 355 PSAAAPLPCVPTQS 314
PSA AP+P +P S
Sbjct: 411 PSAGAPMPPIPNMS 424
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,858
Number of Sequences: 438
Number of extensions: 4783
Number of successful extensions: 92
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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