Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_C14
(780 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical pr... 33 0.23
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 1.6
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 2.1
AF000197-5|AAB52900.3| 579|Caenorhabditis elegans Hypothetical ... 29 4.9
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 28 6.5
>Z37983-1|CAA86061.1| 276|Caenorhabditis elegans Hypothetical
protein B0393.1 protein.
Length = 276
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +1
Query: 70 MSGGLDVLALNEEDVTKMLAATTHLG 147
MSGG AL EEDV K+LA HLG
Sbjct: 1 MSGGAAHSALTEEDVMKLLATQAHLG 26
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 1.2
Identities = 26/96 (27%), Positives = 31/96 (32%), Gaps = 2/96 (2%)
Frame = -2
Query: 395 PPPXXXXXXGGGXXXXXXPXXXXGXXXXXPXPPXGXFLGXXXXGXPPKXF--FXPGXXPI 222
PPP GG P G P PP G F G PP F P
Sbjct: 746 PPPGGLPPISGGPPPPPPPPG--GCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDY 803
Query: 221 XXPRGXXPPXFXNKSFPXGS*HFLPPRWVVAASILV 114
P+ + FP G+ H + PR + S V
Sbjct: 804 LPPKKVPKVDGPMRKFPWGA-HTINPRDIPRESFWV 838
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 1.2
Identities = 26/96 (27%), Positives = 31/96 (32%), Gaps = 2/96 (2%)
Frame = -2
Query: 395 PPPXXXXXXGGGXXXXXXPXXXXGXXXXXPXPPXGXFLGXXXXGXPPKXF--FXPGXXPI 222
PPP GG P G P PP G F G PP F P
Sbjct: 746 PPPGGLPPISGGPPPPPPPPG--GCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDY 803
Query: 221 XXPRGXXPPXFXNKSFPXGS*HFLPPRWVVAASILV 114
P+ + FP G+ H + PR + S V
Sbjct: 804 LPPKKVPKVDGPMRKFPWGA-HTINPRDIPRESFWV 838
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 1.2
Identities = 26/96 (27%), Positives = 31/96 (32%), Gaps = 2/96 (2%)
Frame = -2
Query: 395 PPPXXXXXXGGGXXXXXXPXXXXGXXXXXPXPPXGXFLGXXXXGXPPKXF--FXPGXXPI 222
PPP GG P G P PP G F G PP F P
Sbjct: 329 PPPGGLPPISGGPPPPPPPPG--GCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDY 386
Query: 221 XXPRGXXPPXFXNKSFPXGS*HFLPPRWVVAASILV 114
P+ + FP G+ H + PR + S V
Sbjct: 387 LPPKKVPKVDGPMRKFPWGA-HTINPRDIPRESFWV 421
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -1
Query: 309 PXPPRGGFFGXXXXXGPPXXIFXPGGKXNXXPPGXXPP 196
P PPRGG GPP + P + PPG PP
Sbjct: 1573 PPPPRGG----SHCQGPPPLMGGPPPRLGMPPPGPPPP 1606
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = +2
Query: 215 GXKLXXPPGXKXFXGGPXXXXXPKXPPRGGXGXXKXXPXXXGXXXXXFXPPPXXXXXXGG 394
G PP GP P PPRGG P G PPP GG
Sbjct: 750 GFNAGAPPPPFGRGAGPMSSFPP--PPRGGMHHMPPPPSFRGGRGGHGGPPPPHFDRRGG 807
Query: 395 G 397
G
Sbjct: 808 G 808
>AF000197-5|AAB52900.3| 579|Caenorhabditis elegans Hypothetical
protein T21G5.1 protein.
Length = 579
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = -1
Query: 237 GGKXNXXPPGXXPPXVXKQKFPXWKLTF--SAPKMGGCSKHFGDIFLVEGE 91
G K + PPG PP K K P + P++ GC + G I V+ E
Sbjct: 40 GSKESANPPGTPPPPEEKPKEPMVDVPVVQITPEIKGCQFYHGIIPRVDAE 90
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = -1
Query: 318 FXXPXPPRGGFFGXXXXXGPPXXIFXPGGKXNXXPPGXXPPXVXKQKFPXWK 163
F P PP F G GPP P N PP PP + P W+
Sbjct: 21 FERPPPPDWFFPGPLRPWGPP-----PPWHRNRGPPPFGPPPPWDRPPPPWR 67
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,965,122
Number of Sequences: 27780
Number of extensions: 228577
Number of successful extensions: 498
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 313
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 470
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1882685842
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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