Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_C09
(850 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 39 0.004
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 39 0.004
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 39 0.004
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 39 0.004
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 39 0.004
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 39 0.004
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 38 0.007
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 35 0.064
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 35 0.064
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 35 0.064
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 35 0.064
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 35 0.084
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 35 0.084
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 34 0.15
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 34 0.15
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 33 0.19
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 33 0.19
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 33 0.26
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 33 0.26
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 33 0.26
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 33 0.34
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 33 0.34
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 33 0.34
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 33 0.34
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 33 0.34
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 32 0.45
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.78
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 0.78
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 31 0.78
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 31 1.0
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 31 1.0
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 31 1.0
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 31 1.0
Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical pr... 31 1.4
U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter... 31 1.4
M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein ( C.ele... 31 1.4
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 1.8
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 30 1.8
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 1.8
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 30 1.8
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 30 1.8
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 30 1.8
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 30 1.8
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 30 2.4
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 30 2.4
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 30 2.4
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 30 2.4
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 30 2.4
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 30 2.4
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 3.2
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 29 4.2
Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 28 7.3
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 28 7.3
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 28 7.3
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 28 7.3
U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protei... 28 7.3
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 28 7.3
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 7.3
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 9.6
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 28 9.6
U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific ... 28 9.6
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 28 9.6
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 28 9.6
AC006743-4|AAF60502.1| 291|Caenorhabditis elegans Collagen prot... 28 9.6
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 25 9.7
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 25 9.7
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 39.1 bits (87), Expect = 0.004
Identities = 29/84 (34%), Positives = 29/84 (34%), Gaps = 4/84 (4%)
Frame = -3
Query: 626 PPXXGAPPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXG----GGGXLXXXXXXGPCPPPX 459
PP G PP I P P P PP P P G GG G CPPP
Sbjct: 714 PPPPGLPP-ITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 458 AFLXGGGXXLKKXXGGGGXPPPGG 387
GG GG PPP G
Sbjct: 773 PPPPPGG-----FKGGPPPPPPPG 791
Score = 34.7 bits (76), Expect = 0.084
Identities = 29/98 (29%), Positives = 29/98 (29%)
Frame = -3
Query: 626 PPXXGAPPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLX 447
PP G PP P P P PP P P GG P PPP
Sbjct: 707 PPITGGPP---------PPPGLPPITGGPPPPPPP----GGLPPITGGPPPPPPPGGLPP 753
Query: 446 GGGXXLKKXXGGGGXPPPGGXXPXXKKKXXGPPXKGXG 333
G GG PPP P K PP G
Sbjct: 754 ISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 33.1 bits (72), Expect = 0.26
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Frame = +1
Query: 331 PPXPXWGGPXFFFXKXGXXPPGGG----XPPPPXXFFKXXPPP 447
PP P G P PP GG PPPP FK PPP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 32.7 bits (71), Expect = 0.34
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +1
Query: 340 PXWGGPXFFFXKXGXXPPGGGXPPPPXXFFKXXPPPXKXAXGGGHG 477
P GGP G P GG PPPP PPP GG G
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 782
Score = 29.1 bits (62), Expect = 4.2
Identities = 25/73 (34%), Positives = 25/73 (34%), Gaps = 8/73 (10%)
Frame = -3
Query: 533 APXPXXGGGGXLXXXXXXGPCPPPXAFLXGGGXXLKKXXGG-----GGXPPP---GGXXP 378
AP GG L GP PPP GG GG GG PPP GG P
Sbjct: 695 APSTSAGGSSALPPITG-GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Query: 377 XXKKKXXGPPXKG 339
PP G
Sbjct: 754 ISGGPPPPPPPPG 766
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = +3
Query: 381 GXPPGXGXXPPPXXFF*XXPPPXQKXRGGGTRPXXXXXXQXPAPPXGXAWGRXXGGXP 554
G PP G PPP PP GG P P PP G GG P
Sbjct: 734 GLPPITGGPPPPP------PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 39.1 bits (87), Expect = 0.004
Identities = 29/84 (34%), Positives = 29/84 (34%), Gaps = 4/84 (4%)
Frame = -3
Query: 626 PPXXGAPPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXG----GGGXLXXXXXXGPCPPPX 459
PP G PP I P P P PP P P G GG G CPPP
Sbjct: 714 PPPPGLPP-ITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Query: 458 AFLXGGGXXLKKXXGGGGXPPPGG 387
GG GG PPP G
Sbjct: 773 PPPPPGG-----FKGGPPPPPPPG 791
Score = 34.7 bits (76), Expect = 0.084
Identities = 29/98 (29%), Positives = 29/98 (29%)
Frame = -3
Query: 626 PPXXGAPPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLX 447
PP G PP P P P PP P P GG P PPP
Sbjct: 707 PPITGGPP---------PPPGLPPITGGPPPPPPP----GGLPPITGGPPPPPPPGGLPP 753
Query: 446 GGGXXLKKXXGGGGXPPPGGXXPXXKKKXXGPPXKGXG 333
G GG PPP P K PP G
Sbjct: 754 ISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 791
Score = 33.1 bits (72), Expect = 0.26
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Frame = +1
Query: 331 PPXPXWGGPXFFFXKXGXXPPGGG----XPPPPXXFFKXXPPP 447
PP P G P PP GG PPPP FK PPP
Sbjct: 744 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786
Score = 32.7 bits (71), Expect = 0.34
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +1
Query: 340 PXWGGPXFFFXKXGXXPPGGGXPPPPXXFFKXXPPPXKXAXGGGHG 477
P GGP G P GG PPPP PPP GG G
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 782
Score = 29.1 bits (62), Expect = 4.2
Identities = 25/73 (34%), Positives = 25/73 (34%), Gaps = 8/73 (10%)
Frame = -3
Query: 533 APXPXXGGGGXLXXXXXXGPCPPPXAFLXGGGXXLKKXXGG-----GGXPPP---GGXXP 378
AP GG L GP PPP GG GG GG PPP GG P
Sbjct: 695 APSTSAGGSSALPPITG-GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 753
Query: 377 XXKKKXXGPPXKG 339
PP G
Sbjct: 754 ISGGPPPPPPPPG 766
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = +3
Query: 381 GXPPGXGXXPPPXXFF*XXPPPXQKXRGGGTRPXXXXXXQXPAPPXGXAWGRXXGGXP 554
G PP G PPP PP GG P P PP G GG P
Sbjct: 734 GLPPITGGPPPPP------PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 39.1 bits (87), Expect = 0.004
Identities = 29/84 (34%), Positives = 29/84 (34%), Gaps = 4/84 (4%)
Frame = -3
Query: 626 PPXXGAPPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXG----GGGXLXXXXXXGPCPPPX 459
PP G PP I P P P PP P P G GG G CPPP
Sbjct: 297 PPPPGLPP-ITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Query: 458 AFLXGGGXXLKKXXGGGGXPPPGG 387
GG GG PPP G
Sbjct: 356 PPPPPGG-----FKGGPPPPPPPG 374
Score = 34.7 bits (76), Expect = 0.084
Identities = 29/98 (29%), Positives = 29/98 (29%)
Frame = -3
Query: 626 PPXXGAPPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLX 447
PP G PP P P P PP P P GG P PPP
Sbjct: 290 PPITGGPP---------PPPGLPPITGGPPPPPPP----GGLPPITGGPPPPPPPGGLPP 336
Query: 446 GGGXXLKKXXGGGGXPPPGGXXPXXKKKXXGPPXKGXG 333
G GG PPP P K PP G
Sbjct: 337 ISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPG 374
Score = 33.1 bits (72), Expect = 0.26
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 4/43 (9%)
Frame = +1
Query: 331 PPXPXWGGPXFFFXKXGXXPPGGG----XPPPPXXFFKXXPPP 447
PP P G P PP GG PPPP FK PPP
Sbjct: 327 PPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369
Score = 32.7 bits (71), Expect = 0.34
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = +1
Query: 340 PXWGGPXFFFXKXGXXPPGGGXPPPPXXFFKXXPPPXKXAXGGGHG 477
P GGP G P GG PPPP PPP GG G
Sbjct: 320 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKG 365
Score = 29.1 bits (62), Expect = 4.2
Identities = 25/73 (34%), Positives = 25/73 (34%), Gaps = 8/73 (10%)
Frame = -3
Query: 533 APXPXXGGGGXLXXXXXXGPCPPPXAFLXGGGXXLKKXXGG-----GGXPPP---GGXXP 378
AP GG L GP PPP GG GG GG PPP GG P
Sbjct: 278 APSTSAGGSSALPPITG-GPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPP 336
Query: 377 XXKKKXXGPPXKG 339
PP G
Sbjct: 337 ISGGPPPPPPPPG 349
Score = 27.9 bits (59), Expect = 9.6
Identities = 19/58 (32%), Positives = 19/58 (32%)
Frame = +3
Query: 381 GXPPGXGXXPPPXXFF*XXPPPXQKXRGGGTRPXXXXXXQXPAPPXGXAWGRXXGGXP 554
G PP G PPP PP GG P P PP G GG P
Sbjct: 317 GLPPITGGPPPPP------PPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 39.1 bits (87), Expect = 0.004
Identities = 28/90 (31%), Positives = 30/90 (33%), Gaps = 7/90 (7%)
Frame = -3
Query: 626 PPXXGAPPXIAXXXPXXPX----PXXPXXXXPXPP---APXPXXGGGGXLXXXXXXGPCP 468
PP G+PP P P P P P PP +P P GG P P
Sbjct: 241 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 300
Query: 467 PPXAFLXGGGXXLKKXXGGGGXPPPGGXXP 378
PP G L GG PP G P
Sbjct: 301 PPPRGSPPTG-SLPPPQAGGSPPPAGTGSP 329
Score = 35.1 bits (77), Expect = 0.064
Identities = 18/50 (36%), Positives = 20/50 (40%)
Frame = +1
Query: 331 PPXPXWGGPXFFFXKXGXXPPGGGXPPPPXXFFKXXPPPXKXAXGGGHGP 480
PP P G P PP GG PPPP PPP + + G P
Sbjct: 264 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 313
Score = 31.5 bits (68), Expect = 0.78
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Frame = +1
Query: 331 PPXPXWGGPXFFFXKXGXXPPGGGXPPPPXXFFKXXPP---PXKXAXGGGHGP 480
PP P G P PP G PPPP PP P GG P
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
Score = 28.7 bits (61), Expect = 5.5
Identities = 24/82 (29%), Positives = 26/82 (31%), Gaps = 1/82 (1%)
Frame = +3
Query: 387 PPGXGXXPPPXXFF*XXPPPXQKXRGGGTRPXXXXXXQXPAPPXG-XAWGRXXGGXPGXX 563
PP G PPP PPP QK + P +PP G GR G PG
Sbjct: 314 PPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTG------SPPTGSPPTGRPPRGGPGKS 367
Query: 564 XGXGXXGXXXSNXGRCXRXRGG 629
G RGG
Sbjct: 368 SEESSESREGPRGGPRGGPRGG 389
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 39.1 bits (87), Expect = 0.004
Identities = 28/90 (31%), Positives = 30/90 (33%), Gaps = 7/90 (7%)
Frame = -3
Query: 626 PPXXGAPPXIAXXXPXXPX----PXXPXXXXPXPP---APXPXXGGGGXLXXXXXXGPCP 468
PP G+PP P P P P P PP +P P GG P P
Sbjct: 262 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 321
Query: 467 PPXAFLXGGGXXLKKXXGGGGXPPPGGXXP 378
PP G L GG PP G P
Sbjct: 322 PPPRGSPPTG-SLPPPQAGGSPPPAGTGSP 350
Score = 35.1 bits (77), Expect = 0.064
Identities = 18/50 (36%), Positives = 20/50 (40%)
Frame = +1
Query: 331 PPXPXWGGPXFFFXKXGXXPPGGGXPPPPXXFFKXXPPPXKXAXGGGHGP 480
PP P G P PP GG PPPP PPP + + G P
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 334
Score = 31.5 bits (68), Expect = 0.78
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Frame = +1
Query: 331 PPXPXWGGPXFFFXKXGXXPPGGGXPPPPXXFFKXXPP---PXKXAXGGGHGP 480
PP P G P PP G PPPP PP P GG P
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
Score = 28.7 bits (61), Expect = 5.5
Identities = 24/82 (29%), Positives = 26/82 (31%), Gaps = 1/82 (1%)
Frame = +3
Query: 387 PPGXGXXPPPXXFF*XXPPPXQKXRGGGTRPXXXXXXQXPAPPXG-XAWGRXXGGXPGXX 563
PP G PPP PPP QK + P +PP G GR G PG
Sbjct: 335 PPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTG------SPPTGSPPTGRPPRGGPGKS 388
Query: 564 XGXGXXGXXXSNXGRCXRXRGG 629
G RGG
Sbjct: 389 SEESSESREGPRGGPRGGPRGG 410
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 39.1 bits (87), Expect = 0.004
Identities = 28/90 (31%), Positives = 30/90 (33%), Gaps = 7/90 (7%)
Frame = -3
Query: 626 PPXXGAPPXIAXXXPXXPX----PXXPXXXXPXPP---APXPXXGGGGXLXXXXXXGPCP 468
PP G+PP P P P P P PP +P P GG P P
Sbjct: 247 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 306
Query: 467 PPXAFLXGGGXXLKKXXGGGGXPPPGGXXP 378
PP G L GG PP G P
Sbjct: 307 PPPRGSPPTG-SLPPPQAGGSPPPAGTGSP 335
Score = 35.1 bits (77), Expect = 0.064
Identities = 18/50 (36%), Positives = 20/50 (40%)
Frame = +1
Query: 331 PPXPXWGGPXFFFXKXGXXPPGGGXPPPPXXFFKXXPPPXKXAXGGGHGP 480
PP P G P PP GG PPPP PPP + + G P
Sbjct: 270 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLP 319
Score = 31.5 bits (68), Expect = 0.78
Identities = 18/53 (33%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Frame = +1
Query: 331 PPXPXWGGPXFFFXKXGXXPPGGGXPPPPXXFFKXXPP---PXKXAXGGGHGP 480
PP P G P PP G PPPP PP P GG P
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
Score = 28.7 bits (61), Expect = 5.5
Identities = 24/82 (29%), Positives = 26/82 (31%), Gaps = 1/82 (1%)
Frame = +3
Query: 387 PPGXGXXPPPXXFF*XXPPPXQKXRGGGTRPXXXXXXQXPAPPXG-XAWGRXXGGXPGXX 563
PP G PPP PPP QK + P +PP G GR G PG
Sbjct: 320 PPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTG------SPPTGSPPTGRPPRGGPGKS 373
Query: 564 XGXGXXGXXXSNXGRCXRXRGG 629
G RGG
Sbjct: 374 SEESSESREGPRGGPRGGPRGG 395
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 38.3 bits (85), Expect = 0.007
Identities = 34/128 (26%), Positives = 34/128 (26%), Gaps = 2/128 (1%)
Frame = -3
Query: 764 GPXXGPGXXSXXAPXTGPXGXAGRXGXGRXGXXGXXAXXXXXRXXAPPXXGAPPXIAXXX 585
GP PG G G G G G PP A
Sbjct: 217 GPPGPPGNDGQPGAP-GQDGQPGAPGTNTVNSPGGPGPAGPPGPPGPPGQDGSGGAAQPG 275
Query: 584 PXXPXPXXPXXXXPXPPAPXPXXGGG--GXLXXXXXXGPCPPPXAFLXGGGXXLKKXXGG 411
P P P P P P G G G PCPP GGG GG
Sbjct: 276 P--PGPPGPPGNDGQPGGPGQPGGPGQDGGPGTDAAYCPCPPRTPAGGGGGGDFPAGGGG 333
Query: 410 GGXPPPGG 387
GG GG
Sbjct: 334 GGYSTGGG 341
Score = 29.1 bits (62), Expect = 4.2
Identities = 26/88 (29%), Positives = 27/88 (30%), Gaps = 2/88 (2%)
Frame = +3
Query: 375 TXGXPPGXGXXPPPXXFF*XXPPPXQKXRGGGTRPXXXXXXQXPAPPX--GXAWGRXXGG 548
T P G G PP PP Q GG +P P PP G G G
Sbjct: 244 TVNSPGGPGPAGPPGP----PGPPGQDGSGGAAQPGPPGP---PGPPGNDGQPGGPGQPG 296
Query: 549 XPGXXXGXGXXGXXXSNXGRCXRXRGGG 632
PG G G R GGG
Sbjct: 297 GPGQDGGPGTDAAYCPCPPRTPAGGGGG 324
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 35.1 bits (77), Expect = 0.064
Identities = 39/136 (28%), Positives = 39/136 (28%), Gaps = 2/136 (1%)
Frame = -3
Query: 788 PGARAAXRGPXXGPGXXSXXAPXTGPXGXAGRXGXGRXGXXGXXA-XXXXXRXXAPPXXG 612
PG GP PG P P AG G G G G AP G
Sbjct: 151 PGGPPGPAGPAGPPG---PPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPG 207
Query: 611 APPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLXGGGXX 432
P P P P P P P P G G GP PP A G
Sbjct: 208 EPGASEQGGPGEPGPAGP----PGPAGPAGNDGAPG-TGGPGPAGPKGPPGA---AGAPG 259
Query: 431 LKKXXGGGGXP-PPGG 387
GG G PGG
Sbjct: 260 ADGNPGGPGTAGKPGG 275
Score = 33.1 bits (72), Expect = 0.26
Identities = 35/142 (24%), Positives = 37/142 (26%), Gaps = 3/142 (2%)
Frame = -3
Query: 764 GPXXGPGXXSXXAPXTGPXGXAGRXGX-GRXGXXGXXAXXXXXRXXAPPXXGAPPXIAXX 588
G G G GP G G G G+ G G A AP
Sbjct: 89 GGGGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGA----SAPCEPVTQ 144
Query: 587 XPXXPXPXXPXXXX--PXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLXGGGXXLKKXXG 414
P P P P PP P G G GP PP G G
Sbjct: 145 PPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPG 204
Query: 413 GGGXPPPGGXXPXXKKKXXGPP 348
G G P + GPP
Sbjct: 205 GPGEPGASEQGGPGEPGPAGPP 226
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/62 (30%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Frame = +2
Query: 614 PXPGGRXGALXAXXP-GXRXXPRGPXRXXRRXPXAPXGXXXXXXXPGXXXGPGXRXAPXA 790
P P G G P G P GP P P G PG GPG A
Sbjct: 155 PGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQ 214
Query: 791 XG 796
G
Sbjct: 215 GG 216
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 35.1 bits (77), Expect = 0.064
Identities = 39/136 (28%), Positives = 39/136 (28%), Gaps = 2/136 (1%)
Frame = -3
Query: 788 PGARAAXRGPXXGPGXXSXXAPXTGPXGXAGRXGXGRXGXXGXXA-XXXXXRXXAPPXXG 612
PG GP PG P P AG G G G G AP G
Sbjct: 151 PGGPPGPAGPAGPPG---PPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPG 207
Query: 611 APPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLXGGGXX 432
P P P P P P P P G G GP PP A G
Sbjct: 208 EPGASEQGGPGEPGPAGP----PGPAGPAGNDGAPG-TGGPGPAGPKGPPGA---AGAPG 259
Query: 431 LKKXXGGGGXP-PPGG 387
GG G PGG
Sbjct: 260 ADGNPGGPGTAGKPGG 275
Score = 33.1 bits (72), Expect = 0.26
Identities = 35/142 (24%), Positives = 37/142 (26%), Gaps = 3/142 (2%)
Frame = -3
Query: 764 GPXXGPGXXSXXAPXTGPXGXAGRXGX-GRXGXXGXXAXXXXXRXXAPPXXGAPPXIAXX 588
G G G GP G G G G+ G G A AP
Sbjct: 89 GGGGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGA----SAPCEPVTQ 144
Query: 587 XPXXPXPXXPXXXX--PXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLXGGGXXLKKXXG 414
P P P P PP P G G GP PP G G
Sbjct: 145 PPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPG 204
Query: 413 GGGXPPPGGXXPXXKKKXXGPP 348
G G P + GPP
Sbjct: 205 GPGEPGASEQGGPGEPGPAGPP 226
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/62 (30%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Frame = +2
Query: 614 PXPGGRXGALXAXXP-GXRXXPRGPXRXXRRXPXAPXGXXXXXXXPGXXXGPGXRXAPXA 790
P P G G P G P GP P P G PG GPG A
Sbjct: 155 PGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQ 214
Query: 791 XG 796
G
Sbjct: 215 GG 216
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 35.1 bits (77), Expect = 0.064
Identities = 39/136 (28%), Positives = 39/136 (28%), Gaps = 2/136 (1%)
Frame = -3
Query: 788 PGARAAXRGPXXGPGXXSXXAPXTGPXGXAGRXGXGRXGXXGXXA-XXXXXRXXAPPXXG 612
PG GP PG P P AG G G G G AP G
Sbjct: 151 PGGPPGPAGPAGPPG---PPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPG 207
Query: 611 APPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLXGGGXX 432
P P P P P P P P G G GP PP A G
Sbjct: 208 EPGASEQGGPGEPGPAGP----PGPAGPAGNDGAPG-TGGPGPAGPKGPPGA---AGAPG 259
Query: 431 LKKXXGGGGXP-PPGG 387
GG G PGG
Sbjct: 260 ADGNPGGPGTAGKPGG 275
Score = 33.1 bits (72), Expect = 0.26
Identities = 35/142 (24%), Positives = 37/142 (26%), Gaps = 3/142 (2%)
Frame = -3
Query: 764 GPXXGPGXXSXXAPXTGPXGXAGRXGX-GRXGXXGXXAXXXXXRXXAPPXXGAPPXIAXX 588
G G G GP G G G G+ G G A AP
Sbjct: 89 GGGGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGA----SAPCEPVTQ 144
Query: 587 XPXXPXPXXPXXXX--PXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLXGGGXXLKKXXG 414
P P P P PP P G G GP PP G G
Sbjct: 145 PPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPG 204
Query: 413 GGGXPPPGGXXPXXKKKXXGPP 348
G G P + GPP
Sbjct: 205 GPGEPGASEQGGPGEPGPAGPP 226
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/62 (30%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Frame = +2
Query: 614 PXPGGRXGALXAXXP-GXRXXPRGPXRXXRRXPXAPXGXXXXXXXPGXXXGPGXRXAPXA 790
P P G G P G P GP P P G PG GPG A
Sbjct: 155 PGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQ 214
Query: 791 XG 796
G
Sbjct: 215 GG 216
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 35.1 bits (77), Expect = 0.064
Identities = 39/136 (28%), Positives = 39/136 (28%), Gaps = 2/136 (1%)
Frame = -3
Query: 788 PGARAAXRGPXXGPGXXSXXAPXTGPXGXAGRXGXGRXGXXGXXA-XXXXXRXXAPPXXG 612
PG GP PG P P AG G G G G AP G
Sbjct: 151 PGGPPGPAGPAGPPG---PPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPG 207
Query: 611 APPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLXGGGXX 432
P P P P P P P P G G GP PP A G
Sbjct: 208 EPGASEQGGPGEPGPAGP----PGPAGPAGNDGAPG-TGGPGPAGPKGPPGA---AGAPG 259
Query: 431 LKKXXGGGGXP-PPGG 387
GG G PGG
Sbjct: 260 ADGNPGGPGTAGKPGG 275
Score = 33.1 bits (72), Expect = 0.26
Identities = 35/142 (24%), Positives = 37/142 (26%), Gaps = 3/142 (2%)
Frame = -3
Query: 764 GPXXGPGXXSXXAPXTGPXGXAGRXGX-GRXGXXGXXAXXXXXRXXAPPXXGAPPXIAXX 588
G G G GP G G G G+ G G A AP
Sbjct: 89 GGGGGGGGGCDGCCNPGPPGPGGSPGKPGKPGKPGAPGAPGNPGKGA----SAPCEPVTQ 144
Query: 587 XPXXPXPXXPXXXX--PXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLXGGGXXLKKXXG 414
P P P P PP P G G GP PP G G
Sbjct: 145 PPCQPCPGGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPG 204
Query: 413 GGGXPPPGGXXPXXKKKXXGPP 348
G G P + GPP
Sbjct: 205 GPGEPGASEQGGPGEPGPAGPP 226
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/62 (30%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Frame = +2
Query: 614 PXPGGRXGALXAXXP-GXRXXPRGPXRXXRRXPXAPXGXXXXXXXPGXXXGPGXRXAPXA 790
P P G G P G P GP P P G PG GPG A
Sbjct: 155 PGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQ 214
Query: 791 XG 796
G
Sbjct: 215 GG 216
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 34.7 bits (76), Expect = 0.084
Identities = 28/96 (29%), Positives = 29/96 (30%), Gaps = 4/96 (4%)
Frame = -3
Query: 626 PPXXGAPPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLX 447
P G PP P P P P P GGGG PP +
Sbjct: 127 PGGPGGPPPFGQ-----PFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMG 181
Query: 446 G----GGXXLKKXXGGGGXPPPGGXXPXXKKKXXGP 351
G GG GG G PPPG P GP
Sbjct: 182 GPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGP 217
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/50 (38%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = +1
Query: 334 PXPXWGGPXFFFXKXGXXPPG-GGXPPPPXXFFKXXPPPXKXAXGGGHGP 480
P GGP G PPG GG PP PPP + GG GP
Sbjct: 167 PPGGMGGPPGHGGMGG--PPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGP 214
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 34.7 bits (76), Expect = 0.084
Identities = 28/96 (29%), Positives = 29/96 (30%), Gaps = 4/96 (4%)
Frame = -3
Query: 626 PPXXGAPPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLX 447
P G PP P P P P P GGGG PP +
Sbjct: 407 PGGPGGPPPFGQ-----PFQQAPQGMFNVPTGPPPLMGGGGDPRGPPGGMGGPPGHGGMG 461
Query: 446 G----GGXXLKKXXGGGGXPPPGGXXPXXKKKXXGP 351
G GG GG G PPPG P GP
Sbjct: 462 GPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGP 497
Score = 29.1 bits (62), Expect = 4.2
Identities = 19/50 (38%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = +1
Query: 334 PXPXWGGPXFFFXKXGXXPPG-GGXPPPPXXFFKXXPPPXKXAXGGGHGP 480
P GGP G PPG GG PP PPP + GG GP
Sbjct: 447 PPGGMGGPPGHGGMGG--PPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGP 494
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical protein
C01G8.9a protein.
Length = 1724
Score = 33.9 bits (74), Expect = 0.15
Identities = 34/140 (24%), Positives = 37/140 (26%), Gaps = 4/140 (2%)
Frame = -3
Query: 785 GARAAXRGPXXGPGXXSXXAPXTGPXGXAGRXGX----GRXGXXGXXAXXXXXRXXAPPX 618
G++A R P GPG + T P A G AP
Sbjct: 638 GSQAGSRAPSAGPGPSATPDSSTIPSASAAADAQTTTSSETSTPGEPTSSTPSDTPAPST 697
Query: 617 XGAPPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLXGGG 438
PP P P P P PP P G G PP F G
Sbjct: 698 SVPPPTSVQP----PQPQQPPQGPPGPPGPQQHPGPYPGYPGYGPPGAMRPPAGFAPPPG 753
Query: 437 XXLKKXXGGGGXPPPGGXXP 378
G PPP G P
Sbjct: 754 APYGYPPGA---PPPAGFHP 770
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 33.9 bits (74), Expect = 0.15
Identities = 39/154 (25%), Positives = 40/154 (25%), Gaps = 8/154 (5%)
Frame = -3
Query: 785 GARAAXRGPXXGPGXXSXXAPXTGPXGXAGRXGX-GRXGXXGXXAXXXXXRXXAPPXXGA 609
G AA G G S GP G G+ G G G G A A
Sbjct: 97 GGAAAGEGGGGGGSCCSCGIGAAGPAGAPGKDGAPGEDGKAGNPGTAGSDAEAA----AA 152
Query: 608 PPXIAXXXPXXPXPXXPXXXX--PXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLXGGGX 435
P P P P P PP P G G G PP G
Sbjct: 153 PTASDFCFDCPPGPAGPPGGPGPPGPPGPEGAPGEDGNTPSRGGVGEAGPPGPPGTSGNP 212
Query: 434 XLKKXXGGGGXP-----PPGGXXPXXKKKXXGPP 348
G G P PG P GPP
Sbjct: 213 GTDGAPGNPGAPGQVTETPGTPGPAGAAGPPGPP 246
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 33.5 bits (73), Expect = 0.19
Identities = 43/160 (26%), Positives = 43/160 (26%), Gaps = 11/160 (6%)
Frame = -3
Query: 776 AAXRGPXXGPGXXSXXAPXTGPXGXAGRXGXG-RXGXXGXXAXXXXXRXXAPPXX----G 612
A G GP S P GP G G G G PP G
Sbjct: 265 APPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGPFNPSG 324
Query: 611 APPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCP---PPXAFLXGG 441
APP P P P P P P GG G P PP F G
Sbjct: 325 APPSGGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSG 384
Query: 440 GXXLKKXXG---GGGXPPPGGXXPXXKKKXXGPPXKGXGG 330
G G PP GG P PP G G
Sbjct: 385 APPSGGPPGPFDPSGAPPSGG-PPGPFNPSGAPPSGGPPG 423
Score = 33.5 bits (73), Expect = 0.19
Identities = 41/159 (25%), Positives = 41/159 (25%), Gaps = 10/159 (6%)
Frame = -3
Query: 776 AAXRGPXXGPGXXSXXAPXTGPXGXAGRXGXG-RXGXXGXXAXXXXXRXXAPPXX----G 612
A G GP S P GP G G G G PP G
Sbjct: 340 APPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSG 399
Query: 611 APPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCP---PPXAFLXGG 441
APP P P P P P P GG G P PP F G
Sbjct: 400 APPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSG 459
Query: 440 GXXLKKXXG--GGGXPPPGGXXPXXKKKXXGPPXKGXGG 330
G PP G P PP G G
Sbjct: 460 APPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPG 498
Score = 33.1 bits (72), Expect = 0.26
Identities = 41/159 (25%), Positives = 41/159 (25%), Gaps = 10/159 (6%)
Frame = -3
Query: 776 AAXRGPXXGPGXXSXXAPXTGPXGXAGRXGXG-RXGXXGXXAXXXXXRXXAPPXX----G 612
A G GP S P GP G G G G PP G
Sbjct: 190 APPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFDPSG 249
Query: 611 APPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCP---PPXAFLXGG 441
APP P P P P P P GG G P PP F G
Sbjct: 250 APPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSGAPPSGGPPGPFDPSG 309
Query: 440 GXXLKKXXG--GGGXPPPGGXXPXXKKKXXGPPXKGXGG 330
G PP G P PP G G
Sbjct: 310 AQPSGGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPG 348
Score = 31.5 bits (68), Expect = 0.78
Identities = 29/101 (28%), Positives = 29/101 (28%), Gaps = 6/101 (5%)
Frame = -3
Query: 614 GAPPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCP---PPXAFLXG 444
GAPP P P P P P P GG G P PP F
Sbjct: 174 GAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPSGGPPGPFNPS 233
Query: 443 GGXXLKKXXG---GGGXPPPGGXXPXXKKKXXGPPXKGXGG 330
G G G PP GG P PP G G
Sbjct: 234 GAPPSGGPPGPFDPSGAPPSGG-PPGPFNPSGAPPSGGPPG 273
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 33.5 bits (73), Expect = 0.19
Identities = 28/98 (28%), Positives = 30/98 (30%), Gaps = 4/98 (4%)
Frame = -3
Query: 629 APPXXGAPPXIAXXXPXX----PXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPP 462
+P G PP P P P P P A G GG GP PP
Sbjct: 360 SPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGP----GGYGPPPPG 415
Query: 461 XAFLXGGGXXLKKXXGGGGXPPPGGXXPXXKKKXXGPP 348
G + GG G PPPGG PP
Sbjct: 416 GPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPP 453
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/49 (38%), Positives = 19/49 (38%), Gaps = 2/49 (4%)
Frame = +1
Query: 340 PXWGGPXFFFXKXGXXPPGG--GXPPPPXXFFKXXPPPXKXAXGGGHGP 480
P GGP F G PPGG PPP F PP A G P
Sbjct: 425 PPQGGPGGF----GPPPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGGNP 469
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 33.1 bits (72), Expect = 0.26
Identities = 38/148 (25%), Positives = 38/148 (25%)
Frame = -3
Query: 776 AAXRGPXXGPGXXSXXAPXTGPXGXAGRXGXGRXGXXGXXAXXXXXRXXAPPXXGAPPXI 597
A G GPG P GP G G G GR G G P G P
Sbjct: 141 AGPPGAVGGPGPKGPPGPPGGP-GELG--GPGRGGNRGPPGPRGPPGEAGPDGEGGRPGQ 197
Query: 596 AXXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLXGGGXXLKKXX 417
A P P P P G G GP PP GG K
Sbjct: 198 AGQTRSAPSPPG-QPGQPGEPGSPGEPGPDGRAGHPGRNGPPGPPGD--NGGQGEPGKDG 254
Query: 416 GGGGXPPPGGXXPXXKKKXXGPPXKGXG 333
G G P PP G
Sbjct: 255 EDGENGAAGAAGPKGSCDHCPPPRTAPG 282
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 33.1 bits (72), Expect = 0.26
Identities = 38/148 (25%), Positives = 38/148 (25%)
Frame = -3
Query: 776 AAXRGPXXGPGXXSXXAPXTGPXGXAGRXGXGRXGXXGXXAXXXXXRXXAPPXXGAPPXI 597
A G GPG P GP G G G GR G G P G P
Sbjct: 141 AGPPGAVGGPGPKGPPGPPGGP-GELG--GPGRGGNRGPPGPRGPPGEAGPDGEGGRPGQ 197
Query: 596 AXXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLXGGGXXLKKXX 417
A P P P P G G GP PP GG K
Sbjct: 198 AGQTRSAPSPPG-QPGQPGEPGSPGEPGPDGRAGHPGRNGPPGPPGD--NGGQGEPGKDG 254
Query: 416 GGGGXPPPGGXXPXXKKKXXGPPXKGXG 333
G G P PP G
Sbjct: 255 EDGENGAAGAAGPKGSCDHCPPPRTAPG 282
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 33.1 bits (72), Expect = 0.26
Identities = 29/101 (28%), Positives = 29/101 (28%)
Frame = -3
Query: 764 GPXXGPGXXSXXAPXTGPXGXAGRXGXGRXGXXGXXAXXXXXRXXAPPXXGAPPXIAXXX 585
G PG P GP G AG G G G A AP G P
Sbjct: 177 GTDAAPGSPGPRGPP-GPAGEAGAPGPA--GEPGTPAISEPLTPGAP---GEPGDSGPPG 230
Query: 584 PXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPP 462
P P P PP P G G GP PP
Sbjct: 231 PPGPPGAPGNDGPPGPPGPKGAPGPDGPPGVDGQSGPPGPP 271
Score = 31.1 bits (67), Expect = 1.0
Identities = 28/121 (23%), Positives = 28/121 (23%)
Frame = +1
Query: 391 PGGGXPPPPXXFFKXXPPPXKXAXGGGHGPXXXXSXXXXXXXXXXXXXXXXGXXXXGXXG 570
PG PP PPP K G GP
Sbjct: 128 PGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGP 187
Query: 571 XGXXGXXXAIXGGAPXXGGAXXRXXXXXAXXPXXPXRPXPXRPAXPXGPVXGAXXXXXPG 750
G G A GAP G P P P P P GP PG
Sbjct: 188 RGPPGP--AGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPG 245
Query: 751 P 753
P
Sbjct: 246 P 246
Score = 27.9 bits (59), Expect = 9.6
Identities = 22/90 (24%), Positives = 23/90 (25%)
Frame = -2
Query: 798 RPXAXGAXRXPGPXXXPGXXXXXXXPHGAXGXRRXXRXGPRGXXRXPGXXAXXAPXRPPG 619
+P G PGP PG P GPRG PG P G
Sbjct: 148 KPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRG---PPGPAGEAGAPGPAG 204
Query: 618 XGXTAXYCXXXXRXXPXXXXXXXXPPPXGP 529
T P P P GP
Sbjct: 205 EPGTPAISEPLTPGAPGEPGDSGPPGPPGP 234
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 33.1 bits (72), Expect = 0.26
Identities = 20/50 (40%), Positives = 20/50 (40%), Gaps = 5/50 (10%)
Frame = +1
Query: 331 PPXPXWGG----PXFFFXKXGXXPPG-GGXPPPPXXFFKXXPPPXKXAXG 465
PP P GG P F PP GG PPPP F PPP G
Sbjct: 75 PPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSGLG 124
Score = 33.1 bits (72), Expect = 0.26
Identities = 16/43 (37%), Positives = 16/43 (37%)
Frame = +3
Query: 387 PPGXGXXPPPXXFF*XXPPPXQKXRGGGTRPXXXXXXQXPAPP 515
PPG G PPP F PP GG P P PP
Sbjct: 77 PPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPP 119
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 33.1 bits (72), Expect = 0.26
Identities = 20/59 (33%), Positives = 23/59 (38%)
Frame = -2
Query: 795 PXAXGAXRXPGPXXXPGXXXXXXXPHGAXGXRRXXRXGPRGXXRXPGXXAXXAPXRPPG 619
P A GA PG PG P+G G + + GP G PG P PPG
Sbjct: 154 PGAPGAPGKPGSEGPPGPPGHDG-PNGGPG--QPGQPGPHGPNGHPGKPGSQGPPGPPG 209
Score = 28.7 bits (61), Expect = 5.5
Identities = 25/97 (25%), Positives = 26/97 (26%)
Frame = -3
Query: 638 RXXAPPXXGAPPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPPX 459
R P GAP P P P P P G G GP PP
Sbjct: 114 RPGTPGRPGAPGAPGHPGKPPQSPCEPLTPPPCPACPPGPPGAPGAPGKPGSEGPPGPPG 173
Query: 458 AFLXGGGXXLKKXXGGGGXPPPGGXXPXXKKKXXGPP 348
GG G G P G + GPP
Sbjct: 174 HDGPNGGPGQPGQPGPHG--PNGHPGKPGSQGPPGPP 208
Score = 27.9 bits (59), Expect = 9.6
Identities = 32/123 (26%), Positives = 34/123 (27%), Gaps = 3/123 (2%)
Frame = +2
Query: 440 PPXXKXPXGGDTAPXXXXXTXTR-PPXRXGX-GPXGG-GXXXXXXXXGXXRXXXXQ*XAV 610
PP P G AP + PP G GP GG G G
Sbjct: 144 PPCPACPPGPPGAPGAPGKPGSEGPPGPPGHDGPNGGPGQPGQPGPHGPNGHPGKPGSQG 203
Query: 611 XPXPGGRXGALXAXXPGXRXXPRGPXRXXRRXPXAPXGXXXXXXXPGXXXGPGXRXAPXA 790
P P G PG P R R P G PG PG R P
Sbjct: 204 PPGPPGHSDEPKPGQPGQ------PGRAGPRGPRGVAGIKGKDGAPGSPGQPGPRGGPGE 257
Query: 791 XGR 799
G+
Sbjct: 258 PGQ 260
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 33.1 bits (72), Expect = 0.26
Identities = 29/101 (28%), Positives = 29/101 (28%)
Frame = -3
Query: 764 GPXXGPGXXSXXAPXTGPXGXAGRXGXGRXGXXGXXAXXXXXRXXAPPXXGAPPXIAXXX 585
G PG P GP G AG G G G A AP G P
Sbjct: 172 GTDAAPGSPGPRGPP-GPAGEAGAPGPA--GEPGTPAISEPLTPGAP---GEPGDSGPPG 225
Query: 584 PXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPP 462
P P P PP P G G GP PP
Sbjct: 226 PPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPP 266
Score = 31.1 bits (67), Expect = 1.0
Identities = 28/121 (23%), Positives = 28/121 (23%)
Frame = +1
Query: 391 PGGGXPPPPXXFFKXXPPPXKXAXGGGHGPXXXXSXXXXXXXXXXXXXXXXGXXXXGXXG 570
PG PP PPP K G GP
Sbjct: 123 PGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGP 182
Query: 571 XGXXGXXXAIXGGAPXXGGAXXRXXXXXAXXPXXPXRPXPXRPAXPXGPVXGAXXXXXPG 750
G G A GAP G P P P P P GP PG
Sbjct: 183 RGPPGP--AGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPG 240
Query: 751 P 753
P
Sbjct: 241 P 241
Score = 27.9 bits (59), Expect = 9.6
Identities = 22/90 (24%), Positives = 23/90 (25%)
Frame = -2
Query: 798 RPXAXGAXRXPGPXXXPGXXXXXXXPHGAXGXRRXXRXGPRGXXRXPGXXAXXAPXRPPG 619
+P G PGP PG P GPRG PG P G
Sbjct: 143 KPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRG---PPGPAGEAGAPGPAG 199
Query: 618 XGXTAXYCXXXXRXXPXXXXXXXXPPPXGP 529
T P P P GP
Sbjct: 200 EPGTPAISEPLTPGAPGEPGDSGPPGPPGP 229
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 33.1 bits (72), Expect = 0.26
Identities = 29/101 (28%), Positives = 29/101 (28%)
Frame = -3
Query: 764 GPXXGPGXXSXXAPXTGPXGXAGRXGXGRXGXXGXXAXXXXXRXXAPPXXGAPPXIAXXX 585
G PG P GP G AG G G G A AP G P
Sbjct: 172 GTDAAPGSPGPRGPP-GPAGEAGAPGPA--GEPGTPAISEPLTPGAP---GEPGDSGPPG 225
Query: 584 PXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPP 462
P P P PP P G G GP PP
Sbjct: 226 PPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPP 266
Score = 31.1 bits (67), Expect = 1.0
Identities = 28/121 (23%), Positives = 28/121 (23%)
Frame = +1
Query: 391 PGGGXPPPPXXFFKXXPPPXKXAXGGGHGPXXXXSXXXXXXXXXXXXXXXXGXXXXGXXG 570
PG PP PPP K G GP
Sbjct: 123 PGTPGKPPVAPCEPTTPPPCKPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGP 182
Query: 571 XGXXGXXXAIXGGAPXXGGAXXRXXXXXAXXPXXPXRPXPXRPAXPXGPVXGAXXXXXPG 750
G G A GAP G P P P P P GP PG
Sbjct: 183 RGPPGP--AGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPPGPPGAPGNDGPPG 240
Query: 751 P 753
P
Sbjct: 241 P 241
Score = 27.9 bits (59), Expect = 9.6
Identities = 22/90 (24%), Positives = 23/90 (25%)
Frame = -2
Query: 798 RPXAXGAXRXPGPXXXPGXXXXXXXPHGAXGXRRXXRXGPRGXXRXPGXXAXXAPXRPPG 619
+P G PGP PG P GPRG PG P G
Sbjct: 143 KPCPQGPPGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRG---PPGPAGEAGAPGPAG 199
Query: 618 XGXTAXYCXXXXRXXPXXXXXXXXPPPXGP 529
T P P P GP
Sbjct: 200 EPGTPAISEPLTPGAPGEPGDSGPPGPPGP 229
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 32.7 bits (71), Expect = 0.34
Identities = 28/107 (26%), Positives = 29/107 (27%), Gaps = 4/107 (3%)
Frame = -3
Query: 638 RXXAPPXXGAPPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPPX 459
R P GAP P P P P P G G GP PP
Sbjct: 103 RAGRPGKPGAPGLNGNPGRPPKEPCEPITPPPCKPCPEGPPGPAGPPGPQGNKGPLGPPG 162
Query: 458 AFLXGGGXXLKKXXGGGGXPPPGG----XXPXXKKKXXGPPXKGXGG 330
G G G P PGG P + G P G G
Sbjct: 163 PPGPEGPNGTAGNKGPAGPPGPGGKPGPAGPPGENGRNGEPQPGSPG 209
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 32.7 bits (71), Expect = 0.34
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = +2
Query: 614 PXPGGRXGALXAXXPGXRXXPRGPXRXXRRXPXAPXGXXXXXXXPGXXXGPGXRXAPXAX 793
P P G G PG P GP P P G PG GPG A A
Sbjct: 173 PGPDGTPGE--PGGPGPAGSPAGPSGPGPAGPPGPAGPPGNDGQPGQPGGPGQDGASSAG 230
Query: 794 G 796
G
Sbjct: 231 G 231
Score = 32.3 bits (70), Expect = 0.45
Identities = 39/161 (24%), Positives = 41/161 (25%), Gaps = 9/161 (5%)
Frame = -3
Query: 785 GARAAXRGPXXGPGXXSXXAPXTGPXGXAGRXGX----GRXGXXGXXAXXXXXRXXAPPX 618
G G G G GP G GR G G+ G G AP
Sbjct: 97 GGGGGGGGEAAGGGGGCTGCCNPGPPGPGGRPGKPGTPGKPGAPGNPGASGKGAA-APCE 155
Query: 617 XGAPPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXL--XXXXXXGPC-PPPXAFLX 447
PP P P P P P P G GP PP
Sbjct: 156 PSTPPPCQPCPAGPPGPPGPDGTPGEPGGPGPAGSPAGPSGPGPAGPPGPAGPPGNDGQP 215
Query: 446 G--GGXXLKKXXGGGGXPPPGGXXPXXKKKXXGPPXKGXGG 330
G GG GG PG P GP + G
Sbjct: 216 GQPGGPGQDGASSAGGEAGPGPAGPPGPAGPAGPDGQSGSG 256
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 32.7 bits (71), Expect = 0.34
Identities = 31/110 (28%), Positives = 33/110 (30%), Gaps = 1/110 (0%)
Frame = -3
Query: 788 PGARAAXRGPXXGPGXXSXXAPXTGPXGXAGRXGX-GRXGXXGXXAXXXXXRXXAPPXXG 612
P A GP GP + G G AG+ G G G G P G
Sbjct: 148 PEGPAGPPGPE-GPAGPAGSDGQPGAPGDAGKDGPPGPPGPDGDSGPNGEAGPNGEP--G 204
Query: 611 APPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPP 462
AP P P P P PP P G G GP PP
Sbjct: 205 APGKDGEKGKGEPGPAGP----PGPPGPGGPPGDAGGAGSDGAPGPQGPP 250
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/50 (30%), Positives = 16/50 (32%)
Frame = -2
Query: 768 PGPXXXPGXXXXXXXPHGAXGXRRXXRXGPRGXXRXPGXXAXXAPXRPPG 619
PGP PG P A G GP+G G P PG
Sbjct: 217 PGPAGPPGPPGPGGPPGDAGGAGSDGAPGPQGPPGQDGTPGNAGPDGQPG 266
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 32.7 bits (71), Expect = 0.34
Identities = 31/102 (30%), Positives = 32/102 (31%), Gaps = 1/102 (0%)
Frame = -3
Query: 764 GPXXGPGXXSXXAPXTGPXGXAGRXGXGRXGXXGXXAXXXXXRXXAPPXXG-APPXIAXX 588
G PG P GP G AG+ G G G A AP G A P
Sbjct: 179 GTDATPGLPGPRGPP-GPPGEAGQPGP--QGDAGTPAQSEPLTPGAPGEAGDAGPAGPPG 235
Query: 587 XPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPP 462
P P P P PP P G G GP PP
Sbjct: 236 PPGAPGNDGP----PGPPGPKGSPGPDGPAGVDGQAGPPGPP 273
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 32.7 bits (71), Expect = 0.34
Identities = 31/102 (30%), Positives = 32/102 (31%), Gaps = 1/102 (0%)
Frame = -3
Query: 764 GPXXGPGXXSXXAPXTGPXGXAGRXGXGRXGXXGXXAXXXXXRXXAPPXXG-APPXIAXX 588
G PG P GP G AG+ G G G A AP G A P
Sbjct: 179 GTDATPGLPGPRGPP-GPPGEAGQPGP--QGDAGTPAQSEPLTPGAPGEAGDAGPAGPPG 235
Query: 587 XPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPP 462
P P P P PP P G G GP PP
Sbjct: 236 PPGAPGNDGP----PGPPGPKGSPGPDGPAGVDGQAGPPGPP 273
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 32.3 bits (70), Expect = 0.45
Identities = 37/132 (28%), Positives = 38/132 (28%), Gaps = 7/132 (5%)
Frame = -3
Query: 716 GPXGXAGRXGX-GRXGXXGXXAXXXXXRXXAPPXXGAPPXIAXXXPXXPXPXXPXXXX-- 546
GP G GR G GR G G PP P P P P P
Sbjct: 117 GPPGRDGRPGAPGRPGNPGPPGRDGALLPGPPPK----PPCQKCPPGPPGPAGPPGPKGL 172
Query: 545 PXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLXGGGXXLKKXXG---GGGXP-PPGGXXP 378
P P G G GP P A G G G P PPG P
Sbjct: 173 PGPQGDAGTSGQDGVPGLPGPPGPSGPQGAPGVPGEKGPTGEPGKVINGAPPGPPGPPGP 232
Query: 377 XXKKKXXGPPXK 342
+ GPP K
Sbjct: 233 PGPQGPPGPPGK 244
Score = 32.3 bits (70), Expect = 0.45
Identities = 18/67 (26%), Positives = 21/67 (31%)
Frame = -2
Query: 795 PXAXGAXRXPGPXXXPGXXXXXXXPHGAXGXRRXXRXGPRGXXRXPGXXAXXAPXRPPGX 616
P G PGP PG P A G +G PG P PPG
Sbjct: 224 PGPPGPPGPPGPQGPPGPPGKDGQPGKAGPPGLPGDPGEKGSDGLPGPHGGTGPRGPPGQ 283
Query: 615 GXTAXYC 595
+ +C
Sbjct: 284 PGSCDHC 290
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 31.5 bits (68), Expect = 0.78
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 629 APPXXGAPPXIAXXXPXXPXPXXPXXXXPXPPAPXP 522
A P G P A P P P P P PP P P
Sbjct: 96 ASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTPSP 131
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 31.5 bits (68), Expect = 0.78
Identities = 40/161 (24%), Positives = 43/161 (26%), Gaps = 9/161 (5%)
Frame = -3
Query: 785 GARAAXRGPXXGPGXXSXXAPXTGPXGXAGRXGX-GRXGXXGXXAXXXXX-RXXAPPXXG 612
G A +G G G GP G G G GR G G + + P
Sbjct: 84 GGYAQPQGGGGGGGGQCSTCCRPGPPGAGGTPGKPGRPGAPGAWGMPGNPGKGGSGPCHP 143
Query: 611 APPXIAXXXPXX-PXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLXGGGX 435
P P P P P P GGG GP P A G
Sbjct: 144 VVPTPCKPCPGGRPGPPGPPGRPGSDGQPGRPATGGGAAPRPGPPGPKGPRGAPGNSGRA 203
Query: 434 XLKKXXG------GGGXPPPGGXXPXXKKKXXGPPXKGXGG 330
G GGG PG P G P GG
Sbjct: 204 GAPGQPGNDAHGYGGGVGAPGPAGPRGAPGPAGHPGSSGGG 244
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.78
Identities = 24/70 (34%), Positives = 24/70 (34%), Gaps = 1/70 (1%)
Frame = -3
Query: 536 PAPXPXXGG-GGXLXXXXXXGPCPPPXAFLXGGGXXLKKXXGGGGXPPPGGXXPXXKKKX 360
P P P GG GG G C PP A GG GGGG GG
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGG 109
Query: 359 XGPPXKGXGG 330
G G GG
Sbjct: 110 CGGGGGGCGG 119
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/83 (28%), Positives = 24/83 (28%)
Frame = +3
Query: 381 GXPPGXGXXPPPXXFF*XXPPPXQKXRGGGTRPXXXXXXQXPAPPXGXAWGRXXGGXPGX 560
G G G PPP P GGG P P G G GG G
Sbjct: 41 GCGGGGGCAPPPA-------PCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGG 93
Query: 561 XXGXGXXGXXXSNXGRCXRXRGG 629
G G G G C GG
Sbjct: 94 GGGCGGGGGCGGGGGGCGGGGGG 116
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = -3
Query: 512 GGGXLXXXXXXGPCPPPXAFLXGG-GXXLKKXXGGGGXPPP 393
GGG G C PP A GG G GGGG PP
Sbjct: 35 GGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPP 75
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 0.78
Identities = 24/70 (34%), Positives = 24/70 (34%), Gaps = 1/70 (1%)
Frame = -3
Query: 536 PAPXPXXGG-GGXLXXXXXXGPCPPPXAFLXGGGXXLKKXXGGGGXPPPGGXXPXXKKKX 360
P P P GG GG G C PP A GG GGGG GG
Sbjct: 50 PPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGG 109
Query: 359 XGPPXKGXGG 330
G G GG
Sbjct: 110 CGGGGGGCGG 119
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/83 (28%), Positives = 24/83 (28%)
Frame = +3
Query: 381 GXPPGXGXXPPPXXFF*XXPPPXQKXRGGGTRPXXXXXXQXPAPPXGXAWGRXXGGXPGX 560
G G G PPP P GGG P P G G GG G
Sbjct: 41 GCGGGGGCAPPPA-------PCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGG 93
Query: 561 XXGXGXXGXXXSNXGRCXRXRGG 629
G G G G C GG
Sbjct: 94 GGGCGGGGGCGGGGGGCGGGGGG 116
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/41 (41%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = -3
Query: 512 GGGXLXXXXXXGPCPPPXAFLXGG-GXXLKKXXGGGGXPPP 393
GGG G C PP A GG G GGGG PP
Sbjct: 35 GGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPP 75
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 31.5 bits (68), Expect = 0.78
Identities = 29/126 (23%), Positives = 29/126 (23%)
Frame = -3
Query: 764 GPXXGPGXXSXXAPXTGPXGXAGRXGXGRXGXXGXXAXXXXXRXXAPPXXGAPPXIAXXX 585
GP GPG P G G G G P P
Sbjct: 181 GPAGGPGPAGPPGPAGADGNTPSGGGEGPAGPPGPPGPAGNPGTDGAPGNPGAPGQVTET 240
Query: 584 PXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLXGGGXXLKKXXGGGG 405
P P P P PP P G G GP G G G
Sbjct: 241 PGTPGPAG-AAGPPGPPGPAGNPGSAG-ASEPGPAGPAGDAGPDGAPGNAGAPGAPGEAG 298
Query: 404 XPPPGG 387
P GG
Sbjct: 299 APGSGG 304
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 31.1 bits (67), Expect = 1.0
Identities = 31/128 (24%), Positives = 33/128 (25%)
Frame = -3
Query: 716 GPXGXAGRXGXGRXGXXGXXAXXXXXRXXAPPXXGAPPXIAXXXPXXPXPXXPXXXXPXP 537
GP G G G G G +PP PP A P P
Sbjct: 158 GPPGPPGPDGPA--GPAGPDGEAGSPAAPSPPGPPGPPGPAGPAGNDGAAGTPGPDGPAG 215
Query: 536 PAPXPXXGGGGXLXXXXXXGPCPPPXAFLXGGGXXLKKXXGGGGXPPPGGXXPXXKKKXX 357
+ P G G GP P P G G P G P
Sbjct: 216 ESTYPEPAGPGPAGPPGPAGP-PGPDGASPTAAPGAAGPPGPPG--PAGAPGPDGNPGTA 272
Query: 356 GPPXKGXG 333
GPP K G
Sbjct: 273 GPPGKAGG 280
Score = 29.5 bits (63), Expect = 3.2
Identities = 28/113 (24%), Positives = 30/113 (26%), Gaps = 4/113 (3%)
Frame = -3
Query: 788 PGARAAXRGPXXGPGXXSXXAPXTGPXGXAGRXGX----GRXGXXGXXAXXXXXRXXAPP 621
P + GP PG P GP G AG G G G P
Sbjct: 150 PPCQPCPAGPPGPPGPDGPAGP-AGPDGEAGSPAAPSPPGPPGPPGPAGPAGNDGAAGTP 208
Query: 620 XXGAPPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPP 462
P + P P P P PA P G GP PP
Sbjct: 209 GPDGPAGESTY----PEPAGPGPAGPPGPAGPPGPDGASPTAAPGAAGPPGPP 257
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 31.1 bits (67), Expect = 1.0
Identities = 18/59 (30%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Frame = -2
Query: 798 RPXAXGAXRXPGPXXXPGXXXXXXXPHGAXGXRRXXRXGPRGXXRXPG-XXAXXAPXRP 625
+P G PGP PG P G GP+G PG A P RP
Sbjct: 151 KPCPDGPAGPPGPPGAPGDAGTNGAPGAPGGDAPPGEAGPKGPPGPPGSPGAPGEPGRP 209
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 31.1 bits (67), Expect = 1.0
Identities = 27/103 (26%), Positives = 28/103 (27%), Gaps = 4/103 (3%)
Frame = -3
Query: 626 PPXXGAPPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLX 447
P GAP P P P P P G G GP PP
Sbjct: 109 PGKPGAPGLNGNPGRPPKEPCEPLTPPPCKPCPEGPPGPAGPPGPDGNKGPLGPPGPPGP 168
Query: 446 GGGXXLKKXXGGGGXPPPGG----XXPXXKKKXXGPPXKGXGG 330
G G G P PGG P + G P G G
Sbjct: 169 EGPNGEPGNKGPAGPPGPGGKPGPAGPPGENGNNGEPQPGAPG 211
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 31.1 bits (67), Expect = 1.0
Identities = 37/140 (26%), Positives = 38/140 (27%), Gaps = 6/140 (4%)
Frame = -3
Query: 788 PGARAAXRGPXXG--PGXXSXXAPXTGPXGXAGRXGXGRXGXXGXXAXXXXXRXXAPPXX 615
PGA P PG + P TG G G G G P
Sbjct: 100 PGAPGEQGHPGLAGQPGSGARINPATGRPGFCITCPAGAPGPAGPPGAPGPKGNNGQP-- 157
Query: 614 GAPPXIAXXXPXXPXPXXPXXXXPXPPAPX----PXXGGGGXLXXXXXXGPCPPPXAFLX 447
GAP P P P P P P P G G GP P
Sbjct: 158 GAPAQSGGRGP--PGPRGPAGDAGSPGQPGHPGSPGNPGRGGQRSRGLPGPSGRPGPPGP 215
Query: 446 GGGXXLKKXXGGGGXPPPGG 387
GG GG G P P G
Sbjct: 216 AGGPGQPGHSGGAGSPGPQG 235
Score = 29.5 bits (63), Expect = 3.2
Identities = 33/135 (24%), Positives = 33/135 (24%), Gaps = 1/135 (0%)
Frame = -3
Query: 788 PGARAAXRGPXXGPGXXSXXAPXTGPXGXAGRXGXGRXGXXGXXAXXXXXRXXAPPXXGA 609
P GP PG P GR G G G P G
Sbjct: 135 PAGAPGPAGPPGAPGPKGNNGQPGAPAQSGGRGPPGPRGPAGDAGSPGQPGHPGSP--GN 192
Query: 608 PPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLXGGGXXL 429
P P P P PP P G G GP PP G
Sbjct: 193 PGRGGQRSRGLPGPSG----RPGPPGPAGGPGQPGHSGGAGSPGPQGPPGPSGQPGHSGN 248
Query: 428 KKXXGGGGXP-PPGG 387
G G P PGG
Sbjct: 249 DGVPGAPGNPGSPGG 263
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/68 (27%), Positives = 21/68 (30%)
Frame = +2
Query: 614 PXPGGRXGALXAXXPGXRXXPRGPXRXXRRXPXAPXGXXXXXXXPGXXXGPGXRXAPXAX 793
P P G GA G P P + R P P G PG PG P
Sbjct: 139 PGPAGPPGA--PGPKGNNGQPGAPAQSGGRGPPGPRGPAGDAGSPGQPGHPGSPGNPGRG 196
Query: 794 GRXXXARP 817
G+ P
Sbjct: 197 GQRSRGLP 204
>Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.1 protein.
Length = 297
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/50 (32%), Positives = 17/50 (34%)
Frame = +2
Query: 647 AXXPGXRXXPRGPXRXXRRXPXAPXGXXXXXXXPGXXXGPGXRXAPXAXG 796
A PG + P P R R P P G PG G AP G
Sbjct: 226 AGQPGRQGAPGNPGRPGERGPSGPCGPAGRSGQPGNRGSDGHPGAPGNPG 275
>Z49131-6|CAA88979.1| 297|Caenorhabditis elegans Hypothetical
protein ZC373.7 protein.
Length = 297
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/79 (27%), Positives = 24/79 (30%)
Frame = -2
Query: 816 GRAXXXRPXAXGAXRXPGPXXXPGXXXXXXXPHGAXGXRRXXRXGPRGXXRXPGXXAXXA 637
G+ P A G GP PG P A G +G PG
Sbjct: 215 GKGSAGAPGAPGKAGPAGPAGGPGNNGSAGTPGPAGPAGNPGTPGNKGSDGHPG-----T 269
Query: 636 PXRPPGXGXTAXYCXXXXR 580
P P G G A YC R
Sbjct: 270 PGAPGGPGHDAAYCACPPR 288
>U42437-5|AAA83499.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 13 protein.
Length = 302
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/86 (25%), Positives = 25/86 (29%), Gaps = 1/86 (1%)
Frame = -3
Query: 716 GPXGXAGRXGX-GRXGXXGXXAXXXXXRXXAPPXXGAPPXIAXXXPXXPXPXXPXXXXPX 540
GP G G+ G G G G A + P G P + P P
Sbjct: 190 GPNGAPGKPGAPGAPGDEGLPAVCEPVQKGEPGSTGEPGPVGPPGPSGQPGNDGTPGQPG 249
Query: 539 PPAPXPXXGGGGXLXXXXXXGPCPPP 462
P P G G GP PP
Sbjct: 250 PKGPPGPDGKPGADGNPGQPGPVGPP 275
>M23559-1|AAA27994.1| 302|Caenorhabditis elegans protein (
C.elegans collagen (dpy-13) gene, complete cds. ).
Length = 302
Score = 30.7 bits (66), Expect = 1.4
Identities = 22/86 (25%), Positives = 25/86 (29%), Gaps = 1/86 (1%)
Frame = -3
Query: 716 GPXGXAGRXGX-GRXGXXGXXAXXXXXRXXAPPXXGAPPXIAXXXPXXPXPXXPXXXXPX 540
GP G G+ G G G G A + P G P + P P
Sbjct: 190 GPNGAPGKPGAPGAPGDEGLPAVCEPVQKGEPGSTGEPGPVGPPGPSGQPGNDGTPGQPG 249
Query: 539 PPAPXPXXGGGGXLXXXXXXGPCPPP 462
P P G G GP PP
Sbjct: 250 PKGPPGPDGKPGADGNPGQPGPVGPP 275
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 30.3 bits (65), Expect = 1.8
Identities = 38/138 (27%), Positives = 41/138 (29%), Gaps = 4/138 (2%)
Frame = -3
Query: 788 PGARAAXRGPXXGPGXX-SXXAPXTGPXGXAGRXGXGRXGXXGXXAXXXXXRXXAPPXXG 612
PG A GP PG + AP G G AG G G P G
Sbjct: 133 PG-EAGGAGPPGPPGPDGNPGAP--GNDGEAGSPGTRSISSPGPAGPAGPPGPPGPD--G 187
Query: 611 APPXIAXXXPXXPX-PXXPXXXXPXPPAPXPXXGGG--GXLXXXXXXGPCPPPXAFLXGG 441
AP + P P P P A G G G PCPP + GG
Sbjct: 188 APGGGSGPGPAGPAGPPGPDGNPGSAGADGQPGGPGQDGAPGSDAAYCPCPPRSGAIAGG 247
Query: 440 GXXLKKXXGGGGXPPPGG 387
G GG GG
Sbjct: 248 GGGGDAGVSGGSDSAVGG 265
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 30.3 bits (65), Expect = 1.8
Identities = 38/138 (27%), Positives = 41/138 (29%), Gaps = 4/138 (2%)
Frame = -3
Query: 788 PGARAAXRGPXXGPGXX-SXXAPXTGPXGXAGRXGXGRXGXXGXXAXXXXXRXXAPPXXG 612
PG A GP PG + AP G G AG G G P G
Sbjct: 133 PG-EAGGAGPPGPPGPDGNPGAP--GNDGEAGSPGTRSISSPGPAGPAGPPGPPGPD--G 187
Query: 611 APPXIAXXXPXXPX-PXXPXXXXPXPPAPXPXXGGG--GXLXXXXXXGPCPPPXAFLXGG 441
AP + P P P P A G G G PCPP + GG
Sbjct: 188 APGGGSGPGPAGPAGPPGPDGNPGSAGADGQPGGPGQDGAPGSDAAYCPCPPRSGAIAGG 247
Query: 440 GXXLKKXXGGGGXPPPGG 387
G GG GG
Sbjct: 248 GGGGDAGVSGGSDSAVGG 265
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 30.3 bits (65), Expect = 1.8
Identities = 42/171 (24%), Positives = 45/171 (26%), Gaps = 2/171 (1%)
Frame = -3
Query: 716 GPXGXAGRXGX-GRXGXXGXXAXXXXXRXXAPPXXGAPPXIAXXXPXX-PXPXXPXXXXP 543
GP G AG G G+ G G AP A P A P P P P P
Sbjct: 109 GPPGVAGNPGKPGKPGKPGAPG-----NPGAPGKGAAVPCEAKTPPPCKPCPAGPPGP-P 162
Query: 542 XPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLXGGGXXLKKXXGGGGXPPPGGXXPXXKKK 363
P P G G P PP G G G P P G P +
Sbjct: 163 GPDGPAGPAGPDGEAGSPAAPSPPGPPG---PSGPAGPAGNDGAAGTPGPDG--PAGEST 217
Query: 362 XXGPPXKGXGGXXXXXXXXXXXXGSKXXFFXXPXXXXXNXPXXSPGXXGTP 210
P G G S P +PG G P
Sbjct: 218 YPEPAAPGPAGPPGPAGPPGPDGASPTAAPGAAGPPGPPGPAGAPGPDGNP 268
Score = 29.9 bits (64), Expect = 2.4
Identities = 28/113 (24%), Positives = 30/113 (26%), Gaps = 4/113 (3%)
Frame = -3
Query: 788 PGARAAXRGPXXGPGXXSXXAPXTGPXGXAGRXGX----GRXGXXGXXAXXXXXRXXAPP 621
P + GP PG P GP G AG G G G P
Sbjct: 149 PPCKPCPAGPPGPPGPDGPAGP-AGPDGEAGSPAAPSPPGPPGPSGPAGPAGNDGAAGTP 207
Query: 620 XXGAPPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPP 462
P + P P P P PA P G GP PP
Sbjct: 208 GPDGPAGESTY----PEPAAPGPAGPPGPAGPPGPDGASPTAAPGAAGPPGPP 256
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 655 AXXPXXPXRPXPXRPAXPXGPVXGAXXXXXPGP 753
A P P P P P+ P GP PGP
Sbjct: 177 AGSPAAPSPPGPPGPSGPAGPAGNDGAAGTPGP 209
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/80 (28%), Positives = 24/80 (30%)
Frame = -3
Query: 626 PPXXGAPPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLX 447
P PP + P P P PP P P G P PPP F
Sbjct: 268 PSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGP 327
Query: 446 GGGXXLKKXXGGGGXPPPGG 387
G GG PPP G
Sbjct: 328 PG-------MGGMPPPPPPG 340
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/73 (32%), Positives = 26/73 (35%), Gaps = 3/73 (4%)
Frame = -3
Query: 539 PPAPXPXXG-GGGXLXXXXXXGPCPPPXAFLXGGGXXLKKXXGG--GGXPPPGGXXPXXK 369
PPAP G GGG G P A + GG + GG GG P GG
Sbjct: 69 PPAPACGGGCGGGVAPAPIGGGYAQAPQAPIGGGYAAPQAPIGGGYGGAPIGGGSYAGAG 128
Query: 368 KKXXGPPXKGXGG 330
G P G G
Sbjct: 129 PIGGGAPIGGGAG 141
Score = 29.5 bits (63), Expect = 3.2
Identities = 23/62 (37%), Positives = 24/62 (38%), Gaps = 9/62 (14%)
Frame = -3
Query: 545 PXPPAPXPXXGGGG---------XLXXXXXXGPCPPPXAFLXGGGXXLKKXXGGGGXPPP 393
P PP+P GGGG L G C PP A GGG GGG P P
Sbjct: 33 PPPPSPCGCGGGGGLALPQLPPLSLPSLGGGGGCCPPPAPACGGG------CGGGVAPAP 86
Query: 392 GG 387
G
Sbjct: 87 IG 88
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/80 (28%), Positives = 24/80 (30%)
Frame = -3
Query: 626 PPXXGAPPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLX 447
P PP + P P P PP P P G P PPP F
Sbjct: 278 PSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGP 337
Query: 446 GGGXXLKKXXGGGGXPPPGG 387
G GG PPP G
Sbjct: 338 PG-------MGGMPPPPPPG 350
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = +1
Query: 340 PXWGGPXFFFXKXGXXPP--GGGXPPPPXXFFKXXPPP 447
P GGP PP G G PPPP ++ PPP
Sbjct: 72 PFMGGPPPHHQYHLQYPPPHGLGPPPPPPHYYTQPPPP 109
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 30.3 bits (65), Expect = 1.8
Identities = 20/67 (29%), Positives = 20/67 (29%), Gaps = 4/67 (5%)
Frame = -2
Query: 768 PGPXXXPGXXXXXXXPHGAXGXRRXXRXGPRGXXRXPGXXAXXAPXRPPG----XGXTAX 601
PGP PG P G G GP G PG PG G A
Sbjct: 258 PGPAGPPGPPGNNGAPGGGYGVGPPGPPGPSGRPGAPGQPGPDGQPGAPGNDGTPGTDAA 317
Query: 600 YCXXXXR 580
YC R
Sbjct: 318 YCPCPGR 324
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/73 (31%), Positives = 23/73 (31%), Gaps = 4/73 (5%)
Frame = -3
Query: 545 PXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLXGGGXXLKKXXGGG----GXPPPGGXXP 378
P PP P P GGG GP P A G GGG G P GG
Sbjct: 63 PPPPPPPPAPIGGGAGYAAPFGGPGPVGGASYSQGPQGFGGQVGGGAYQAGPGPIGGGAS 122
Query: 377 XXKKKXXGPPXKG 339
GP G
Sbjct: 123 SHAGSQAGPSYAG 135
Score = 29.5 bits (63), Expect = 3.2
Identities = 25/99 (25%), Positives = 29/99 (29%), Gaps = 7/99 (7%)
Frame = -3
Query: 785 GARAAXRGPXXGPGXXSXXAPXTGPXGXAGRXGXGR----XGXXGXXAXXXXXRXXAPPX 618
G A P GPG + GP G G+ G G G G A P
Sbjct: 74 GGGAGYAAPFGGPGPVGGASYSQGPQGFGGQVGGGAYQAGPGPIGGGASSHAGSQAGPSY 133
Query: 617 XGAPPXI---AXXXPXXPXPXXPXXXXPXPPAPXPXXGG 510
GA + + P P PAP GG
Sbjct: 134 AGASQAVGASSYARSQGPIGGGPSYAGASQPAPVAPQGG 172
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -3
Query: 515 GGGGXLXXXXXXGPCPPPXAFLXGGGXXLKKXXGGGGXPPPGG 387
GGGG P PPP GGG GG G P GG
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGGPG--PVGG 91
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/73 (31%), Positives = 23/73 (31%), Gaps = 4/73 (5%)
Frame = -3
Query: 545 PXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLXGGGXXLKKXXGGG----GXPPPGGXXP 378
P PP P P GGG GP P A G GGG G P GG
Sbjct: 63 PPPPPPPPAPIGGGAGYAAPFGGPGPVGGASYSQGPQGFGGQVGGGAYQAGPGPIGGGAS 122
Query: 377 XXKKKXXGPPXKG 339
GP G
Sbjct: 123 SHAGSQAGPSYAG 135
Score = 29.5 bits (63), Expect = 3.2
Identities = 25/99 (25%), Positives = 29/99 (29%), Gaps = 7/99 (7%)
Frame = -3
Query: 785 GARAAXRGPXXGPGXXSXXAPXTGPXGXAGRXGXGR----XGXXGXXAXXXXXRXXAPPX 618
G A P GPG + GP G G+ G G G G A P
Sbjct: 74 GGGAGYAAPFGGPGPVGGASYSQGPQGFGGQVGGGAYQAGPGPIGGGASSHAGSQAGPSY 133
Query: 617 XGAPPXI---AXXXPXXPXPXXPXXXXPXPPAPXPXXGG 510
GA + + P P PAP GG
Sbjct: 134 AGASQAVGASSYARSQGPIGGGPSYAGASQPAPVAPQGG 172
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -3
Query: 515 GGGGXLXXXXXXGPCPPPXAFLXGGGXXLKKXXGGGGXPPPGG 387
GGGG P PPP GGG GG G P GG
Sbjct: 51 GGGGSYAAAPALPPPPPPPPAPIGGGAGYAAPFGGPG--PVGG 91
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/55 (32%), Positives = 19/55 (34%)
Frame = -2
Query: 783 GAXRXPGPXXXPGXXXXXXXPHGAXGXRRXXRXGPRGXXRXPGXXAXXAPXRPPG 619
G PGP PG P G G + GP G PG P PPG
Sbjct: 276 GPSGPPGPMGFPG-------PKGIDGFSQVGSMGPPGNRGAPGRVGLNGPRGPPG 323
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 29.9 bits (64), Expect = 2.4
Identities = 30/111 (27%), Positives = 30/111 (27%), Gaps = 1/111 (0%)
Frame = -3
Query: 716 GPXGXAGRXGX-GRXGXXGXXAXXXXXRXXAPPXXGAPPXIAXXXPXXPXPXXPXXXXPX 540
GP G G G G G G PP G P A P P P
Sbjct: 210 GPPGQPGPDGPPGAPGNAGEDGKPGDQGPRGPP--GIPG--APGQPGRPGPPGEPGTYKT 265
Query: 539 PPAPXPXXGGGGXLXXXXXXGPCPPPXAFLXGGGXXLKKXXGGGGXPPPGG 387
P G G GP PP GGG G G P G
Sbjct: 266 EVGPAGRAGAPGRPGPPGQPGPAGPPGENGKGGGQGPSGLPGPPGQPGQNG 316
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = -2
Query: 765 GPXXXPGXXXXXXXPHGAXGXRRXXRXGPRGXXRXPGXXAXXAPXRPPGXGXT 607
GP PG P A + GPRG PG PPG T
Sbjct: 210 GPPGQPGPDGPPGAPGNAGEDGKPGDQGPRGPPGIPGAPGQPGRPGPPGEPGT 262
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 29.9 bits (64), Expect = 2.4
Identities = 30/111 (27%), Positives = 30/111 (27%), Gaps = 1/111 (0%)
Frame = -3
Query: 716 GPXGXAGRXGX-GRXGXXGXXAXXXXXRXXAPPXXGAPPXIAXXXPXXPXPXXPXXXXPX 540
GP G G G G G G PP G P A P P P
Sbjct: 191 GPPGQPGPDGPPGAPGNAGEDGKPGDQGPRGPP--GIPG--APGQPGRPGPPGEPGTYKT 246
Query: 539 PPAPXPXXGGGGXLXXXXXXGPCPPPXAFLXGGGXXLKKXXGGGGXPPPGG 387
P G G GP PP GGG G G P G
Sbjct: 247 EVGPAGRAGAPGRPGPPGQPGPAGPPGENGKGGGQGPSGLPGPPGQPGQNG 297
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/53 (30%), Positives = 17/53 (32%)
Frame = -2
Query: 765 GPXXXPGXXXXXXXPHGAXGXRRXXRXGPRGXXRXPGXXAXXAPXRPPGXGXT 607
GP PG P A + GPRG PG PPG T
Sbjct: 191 GPPGQPGPDGPPGAPGNAGEDGKPGDQGPRGPPGIPGAPGQPGRPGPPGEPGT 243
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/77 (28%), Positives = 23/77 (29%)
Frame = -3
Query: 608 PPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLXGGGXXL 429
PP P P P P PPAP G P PPP
Sbjct: 1280 PPLQPPPPPQMTGP--PIGIYPGPPAPGNLPGSSRPSGNRKQPLPPPPPMIRGPPPDQMY 1337
Query: 428 KKXXGGGGXPPPGGXXP 378
+ GGGG GG P
Sbjct: 1338 RDRSGGGGGSMRGGFPP 1354
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/68 (27%), Positives = 21/68 (30%)
Frame = +2
Query: 614 PXPGGRXGALXAXXPGXRXXPRGPXRXXRRXPXAPXGXXXXXXXPGXXXGPGXRXAPXAX 793
P P G GA G P P + R P P G PG PG P
Sbjct: 139 PGPAGPPGA--PGPKGNNGQPGAPAQSGGRGPPGPRGPAGDAGSPGQPGHPGSPGNPGRG 196
Query: 794 GRXXXARP 817
G+ P
Sbjct: 197 GQRSRGTP 204
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 29.9 bits (64), Expect = 2.4
Identities = 22/77 (28%), Positives = 23/77 (29%)
Frame = -3
Query: 608 PPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLXGGGXXL 429
PP P P P P PPAP G P PPP
Sbjct: 1280 PPLQPPPPPQMTGP--PIGIYPGPPAPGNLPGSSRPSGNRKQPLPPPPPMIRGPPPDQMY 1337
Query: 428 KKXXGGGGXPPPGGXXP 378
+ GGGG GG P
Sbjct: 1338 RDRSGGGGGSMRGGFPP 1354
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = -3
Query: 626 PPXXGAPPXIAXXXPXXPXPXXPXXXXPXPPAPXP 522
PP P P P P P P PP P P
Sbjct: 55 PPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPPMP 89
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 29.1 bits (62), Expect = 4.2
Identities = 40/148 (27%), Positives = 42/148 (28%), Gaps = 3/148 (2%)
Frame = -3
Query: 764 GPXXGPGXXSXXAPXTGPXGXAGRXGX-GRXGXXGXXAXXXXX-RXXAPPXXGAP-PXIA 594
GP PG G G AG G GR G G + AP GAP P
Sbjct: 150 GPPGPPGFPGSDGQP-GRDGEAGAPGQPGRDGAGGYGGPQQNDCQTCAPARQGAPGPPGP 208
Query: 593 XXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLXGGGXXLKKXXG 414
P P P P G GG G P G + G
Sbjct: 209 AGQPGQPGEPGHSDTSSTAGPPGPP-GPGGPPGQDGHPGDAGAP-------GAPGQVVAG 260
Query: 413 GGGXPPPGGXXPXXKKKXXGPPXKGXGG 330
G PPG P G P G GG
Sbjct: 261 PGSVGPPGPQGPPGLAGPDGQPGHGGGG 288
>Z81143-1|CAB03513.1| 381|Caenorhabditis elegans Hypothetical
protein ZK265.2 protein.
Length = 381
Score = 29.1 bits (62), Expect = 4.2
Identities = 29/112 (25%), Positives = 31/112 (27%), Gaps = 3/112 (2%)
Frame = -3
Query: 764 GPXXGPGXXSXXAPX--TGPXGXAGRXGXGRXGXXGXX-AXXXXXRXXAPPXXGAPPXIA 594
GP G P GP G G G G+ G G A R P G
Sbjct: 188 GPEGDEGTPGLPGPPGEDGPVGQNGTRGQGQPGPVGAPGAPGGPGRDGEPGENGQD---G 244
Query: 593 XXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLXGGG 438
P P P P P G G PCPP A + G
Sbjct: 245 QQGPEGPAGADGQPGHPGPDGPSGDVGEVGAPGADAAYCPCPPRSAEMAATG 296
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/73 (24%), Positives = 23/73 (31%)
Frame = +2
Query: 614 PXPGGRXGALXAXXPGXRXXPRGPXRXXRRXPXAPXGXXXXXXXPGXXXGPGXRXAPXAX 793
P P G G P P P + + P P G PG PG +P
Sbjct: 141 PGPAGAPGQPGPKGPNGN--PGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPGKS 198
Query: 794 GRXXXARPXXAXA 832
G+ P + A
Sbjct: 199 GQRGRGLPGPSGA 211
Score = 29.1 bits (62), Expect = 4.2
Identities = 25/101 (24%), Positives = 28/101 (27%), Gaps = 1/101 (0%)
Frame = -3
Query: 764 GPXXGPGXXSXXAPXTGPXGXAGRXGXGRXGXXG-XXAXXXXXRXXAPPXXGAPPXIAXX 588
GP PG P P A G G G G + + AP G+P
Sbjct: 142 GPAGAPGQPGPKGPNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPGKSGQR 201
Query: 587 XPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPP 465
P P P AP G G GP P
Sbjct: 202 GRGLPGPSGAPGSQGPPGAPG-QPGSGNAPGPAGPPGPAGP 241
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +3
Query: 462 GGGTRPXXXXXXQXPAPPXGXAWGRXXGGXPGXXXGXGXXGXXXSNXGRCXRXRGG 629
GGG P P G G GG G G G G G C GG
Sbjct: 43 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCGGGGGG 98
Score = 28.7 bits (61), Expect = 5.5
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +3
Query: 462 GGGTRPXXXXXXQXPAPPXGXAWGRXXGGXPGXXXGXGXXGXXXSNXGRCXRXRGG 629
GGG P P G G GG G G G G G C GG
Sbjct: 100 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGGGGGGCGGGGGG 155
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/73 (24%), Positives = 23/73 (31%)
Frame = +2
Query: 614 PXPGGRXGALXAXXPGXRXXPRGPXRXXRRXPXAPXGXXXXXXXPGXXXGPGXRXAPXAX 793
P P G G P P P + + P P G PG PG +P
Sbjct: 141 PGPAGVPGQPGPKGPNGN--PGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPGKS 198
Query: 794 GRXXXARPXXAXA 832
G+ P + A
Sbjct: 199 GQRGRGLPGPSGA 211
Score = 27.9 bits (59), Expect = 9.6
Identities = 25/101 (24%), Positives = 28/101 (27%), Gaps = 1/101 (0%)
Frame = -3
Query: 764 GPXXGPGXXSXXAPXTGPXGXAGRXGXGRXGXXG-XXAXXXXXRXXAPPXXGAPPXIAXX 588
GP PG P P A G G G G + + AP G+P
Sbjct: 142 GPAGVPGQPGPKGPNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPGKSGQR 201
Query: 587 XPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPP 465
P P P AP G G GP P
Sbjct: 202 GRGLPGPSGAPGPQGPPGAPG-QPGSGNAPGPAGPPGPAGP 241
>Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical
protein F15A2.1 protein.
Length = 291
Score = 28.3 bits (60), Expect = 7.3
Identities = 35/154 (22%), Positives = 38/154 (24%), Gaps = 1/154 (0%)
Frame = -3
Query: 788 PGARAAXRGPXXGPGXXSXXAPXT-GPXGXAGRXGXGRXGXXGXXAXXXXXRXXAPPXXG 612
P RGP PG AP G G G+ P G
Sbjct: 101 PDGPPGARGPQGAPGLPG--APGVDGKPGVDGKSLTYVHAAEADCIPCPGGEAGPPGPDG 158
Query: 611 APPXIAXXXPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPPXAFLXGGGXX 432
P P P P P P G G + GP P G
Sbjct: 159 EPGVRGPNGPPGPNGHPGQPGRPGPAGPAGPEGKDGPVGPHGPAGPAGPRGTRHSAGVPG 218
Query: 431 LKKXXGGGGXPPPGGXXPXXKKKXXGPPXKGXGG 330
G G P G P K P +G GG
Sbjct: 219 KPGDVGPCGPEGPKG-APGTPGKNGAPGDRGFGG 251
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 28.3 bits (60), Expect = 7.3
Identities = 26/102 (25%), Positives = 27/102 (26%), Gaps = 1/102 (0%)
Frame = -3
Query: 764 GPXXGPGXXSXXAPXTGPXGXAGRXGXGRXGXXGXXA-XXXXXRXXAPPXXGAPPXIAXX 588
GP PG P P A G G G G + AP G P
Sbjct: 140 GPAGAPGNPGPQGPNGNPGAPAHGGGQGPPGPPGPAGDAGSPGQAGAPGNPGRPGQSGQR 199
Query: 587 XPXXPXPXXPXXXXPXPPAPXPXXGGGGXLXXXXXXGPCPPP 462
P P P P P G G GP PP
Sbjct: 200 SRGLPGP----SGRPGPQGPPGAPGQPGSGSTPGPAGPPGPP 237
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +1
Query: 331 PPXPXWGGPXFFFXKXGXXPPGGGXPPPPXXFFKXXPPPXKXAXGG 468
P P P P G P PP + PPP A GG
Sbjct: 31 PSQPACANPCGGASAAAYAAPAAGYPRPPIGYGAPPPPPPPPAFGG 76
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +1
Query: 331 PPXPXWGGPXFFFXKXGXXPPGGGXPPPPXXFFKXXPPPXKXAXGG 468
P P P P G P PP + PPP A GG
Sbjct: 31 PSQPACANPCGGASAAAYAAPAAGYPRPPIGYGAPPPPPPPPAFGG 76
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/46 (30%), Positives = 15/46 (32%)
Frame = +1
Query: 331 PPXPXWGGPXFFFXKXGXXPPGGGXPPPPXXFFKXXPPPXKXAXGG 468
P P P P G P PP + PPP A GG
Sbjct: 31 PSQPACANPCGGASAAAYAAPAAGYPRPPIGYGAPPPPPPPPAFGG 76
>U41011-8|AAA82291.2| 321|Caenorhabditis elegans Collagen protein
114 protein.
Length = 321
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/64 (31%), Positives = 21/64 (32%)
Frame = -2
Query: 795 PXAXGAXRXPGPXXXPGXXXXXXXPHGAXGXRRXXRXGPRGXXRXPGXXAXXAPXRPPGX 616
P G PGP PG P G G + G G PG P PPG
Sbjct: 240 PGPPGDSGIPGPPGPPGMAGPDGIP-GMGGAK-----GQNGPDGPPGASGESGPNGPPGS 293
Query: 615 GXTA 604
G A
Sbjct: 294 GGGA 297
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = -3
Query: 626 PPXXGAPPXIAXXXPXXPXPXXPXXXXPXPPAPXP 522
PP PP P P P P PP P P
Sbjct: 46 PPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 7.3
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 2/29 (6%)
Frame = +1
Query: 334 PXPXWGGPX--FFFXKXGXXPPGGGXPPP 414
P P GGP G PP GG PPP
Sbjct: 1585 PPPLMGGPPPRLGMPPPGPPPPNGGPPPP 1613
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 27.9 bits (59), Expect = 9.6
Identities = 20/69 (28%), Positives = 23/69 (33%), Gaps = 7/69 (10%)
Frame = -3
Query: 626 PPXXG-APPXIAXXXPXXPXPXXPXXXXPXPPAPXP------XXGGGGXLXXXXXXGPCP 468
PP G AP P P P P PP P P G + P P
Sbjct: 523 PPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPP 582
Query: 467 PPXAFLXGG 441
PP +F+ G
Sbjct: 583 PPPSFMFNG 591
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical protein
K01A6.2 protein.
Length = 1092
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +1
Query: 367 FXKXGXXPPGGGXPPPPXXFFKXXPPPXKXAXGG 468
F G G PPPP ++ PPP A G
Sbjct: 960 FTMNGHYESNYGLPPPPPSVYEKHPPPSYLAFDG 993
>U64609-7|AAB04604.3| 373|Caenorhabditis elegans Sperm-specific
family, class qprotein 4 protein.
Length = 373
Score = 27.9 bits (59), Expect = 9.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -3
Query: 443 GGXXLKKXXGGGGXPPPG 390
GG K GGGG PPPG
Sbjct: 29 GGGGGNKSAGGGGAPPPG 46
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +1
Query: 331 PPXPXWGGPXFFFXKXGXXPPGGGX-PPPPXXFFKXXPPPXKXAXGGGHGP 480
PP +G P PP G PPPP F PPP G G P
Sbjct: 271 PPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHF---PPPPPHFMGRGMPP 318
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Frame = +1
Query: 331 PPXPXWGGPXFFFXKXGXXPPGGGX-PPPPXXFFKXXPPPXKXAXGGGHGP 480
PP +G P PP G PPPP F PPP G G P
Sbjct: 271 PPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHF---PPPPPHFMGRGMPP 318
>AC006743-4|AAF60502.1| 291|Caenorhabditis elegans Collagen protein
109 protein.
Length = 291
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/48 (29%), Positives = 15/48 (31%)
Frame = +1
Query: 607 GAPXXGGAXXRXXXXXAXXPXXPXRPXPXRPAXPXGPVXGAXXXXXPG 750
GAP G R P P P P P GP + PG
Sbjct: 114 GAPGRPGTPGRPPIVCEEQDVPPCNPCPPGPPGPQGPTGNSGQPGRPG 161
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 25.4 bits (53), Expect(2) = 9.7
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +1
Query: 394 GGGXPPPPXXFFKXXPPPXKXAXGG 468
GG PPPP PPP G
Sbjct: 787 GGIPPPPPLGIIPPPPPPGNLLMNG 811
Score = 20.6 bits (41), Expect(2) = 9.7
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 388 PPGGGXPPPP 417
P G G PPPP
Sbjct: 764 PVGVGVPPPP 773
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 25.4 bits (53), Expect(2) = 9.7
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +1
Query: 394 GGGXPPPPXXFFKXXPPPXKXAXGG 468
GG PPPP PPP G
Sbjct: 787 GGIPPPPPLGIIPPPPPPGNLLMNG 811
Score = 20.6 bits (41), Expect(2) = 9.7
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 388 PPGGGXPPPP 417
P G G PPPP
Sbjct: 764 PVGVGVPPPP 773
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,019,610
Number of Sequences: 27780
Number of extensions: 341734
Number of successful extensions: 2201
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 639
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1732
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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