Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BmNP16_FL5_C08
(915 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein. 41 0.005
U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein. 35 0.36
BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein. 35 0.36
AF093747-1|AAD29861.1| 115|Homo sapiens KH type splicing regula... 35 0.36
BC065551-1|AAH65551.1| 440|Homo sapiens WAS/WASL interacting pr... 33 1.9
AJ431177-1|CAD24007.1| 440|Homo sapiens WIRE protein protein. 33 1.9
AB043786-1|BAB85113.1| 440|Homo sapiens WICH protein. 33 1.9
BC073988-1|AAH73988.1| 682|Homo sapiens FMNL1 protein protein. 31 4.4
AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein. 31 4.4
AL590383-2|CAH71374.2| 2279|Homo sapiens zinc finger protein 318... 31 4.4
AL583834-6|CAI14459.2| 2279|Homo sapiens zinc finger protein 318... 31 4.4
AF432213-1|AAL99920.1| 991|Homo sapiens CLL-associated antigen ... 31 4.4
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 31 5.8
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 31 5.8
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 31 5.8
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 31 5.8
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 31 5.8
AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens ... 31 5.8
X07517-1|CAA30395.2| 236|Homo sapiens salivary proline-rich pro... 31 7.7
>BC038446-1|AAH38446.1| 673|Homo sapiens SF1 protein protein.
Length = 673
Score = 41.1 bits (92), Expect = 0.005
Identities = 28/90 (31%), Positives = 28/90 (31%)
Frame = -2
Query: 509 PGPXPXXXXPXTXPAAXRXPRRPXGSKEGXLAVXRXXAXAPPPPGRXXXGXXXXXXXPPP 330
PGP P A P P GS A A PPPP PPP
Sbjct: 30 PGPPPAPGPGAGLLAPGPPPPPPVGSMGALTAAFPFAALPPPPPPPPPPPPQQPPPPPPP 89
Query: 329 XXPGXEKKKTXGXXPRXPXXXXVSXPXPPP 240
PG P P VS P PPP
Sbjct: 90 PSPGASYPPPQ-PPPPPPLYQRVSPPQPPP 118
>U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein.
Length = 711
Score = 35.1 bits (77), Expect = 0.36
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = -2
Query: 389 PPPPGRXXXGXXXXXXXPPPXXPGXEKKKTXGXXPRXPXXXXVSXPXPPPGXXG 228
PPPP G PPP PG + G P P PPG G
Sbjct: 13 PPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPCGGGPGGGSAGGPSQPPGGGG 66
>BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein.
Length = 710
Score = 35.1 bits (77), Expect = 0.36
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = -2
Query: 389 PPPPGRXXXGXXXXXXXPPPXXPGXEKKKTXGXXPRXPXXXXVSXPXPPPGXXG 228
PPPP G PPP PG + G P P PPG G
Sbjct: 13 PPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPGGGGPGGGSAGGPSQPPGGGG 66
>AF093747-1|AAD29861.1| 115|Homo sapiens KH type splicing
regulatory protein protein.
Length = 115
Score = 35.1 bits (77), Expect = 0.36
Identities = 17/54 (31%), Positives = 18/54 (33%)
Frame = -2
Query: 389 PPPPGRXXXGXXXXXXXPPPXXPGXEKKKTXGXXPRXPXXXXVSXPXPPPGXXG 228
PPPP G PPP PG + G P P PPG G
Sbjct: 13 PPPPAGGGGGAGGAGGGPPPGPPGAGDRGGGGPCGGGPGGGSAGGPSQPPGGGG 66
>BC065551-1|AAH65551.1| 440|Homo sapiens WAS/WASL interacting
protein family, member 2 protein.
Length = 440
Score = 32.7 bits (71), Expect = 1.9
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = -2
Query: 398 AXAPPPPGRXXXGXXXXXXXPPPXXPGXEKKKTXGXXPRXPXXXXVSXPXPPP 240
A PPPP G PPP + + G P P P PPP
Sbjct: 323 AAPPPPPPVIRNGARDAPPPPPPYRMHGSEPPSRGKPPPPPSRTPAGPPPPPP 375
>AJ431177-1|CAD24007.1| 440|Homo sapiens WIRE protein protein.
Length = 440
Score = 32.7 bits (71), Expect = 1.9
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = -2
Query: 398 AXAPPPPGRXXXGXXXXXXXPPPXXPGXEKKKTXGXXPRXPXXXXVSXPXPPP 240
A PPPP G PPP + + G P P P PPP
Sbjct: 323 AAPPPPPPVIRNGARDAPPPPPPYRMHGSEPPSRGKPPPPPSRTPAGPPPPPP 375
>AB043786-1|BAB85113.1| 440|Homo sapiens WICH protein.
Length = 440
Score = 32.7 bits (71), Expect = 1.9
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = -2
Query: 398 AXAPPPPGRXXXGXXXXXXXPPPXXPGXEKKKTXGXXPRXPXXXXVSXPXPPP 240
A PPPP G PPP + + G P P P PPP
Sbjct: 323 AAPPPPPPVIRNGARDAPPPPPPYRMHGSEPPSRGKPPPPPSRTPAGPPPPPP 375
>BC073988-1|AAH73988.1| 682|Homo sapiens FMNL1 protein protein.
Length = 682
Score = 31.5 bits (68), Expect = 4.4
Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 1/65 (1%)
Frame = -2
Query: 509 PG-PXPXXXXPXTXPAAXRXPRRPXGSKEGXLAVXRXXAXAPPPPGRXXXGXXXXXXXPP 333
PG P P P P A P P L PPPP G PP
Sbjct: 131 PGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPPPPPPPPPPGTDGPVPPPPPPP 190
Query: 332 PXXPG 318
P PG
Sbjct: 191 PPPPG 195
>AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.
Length = 1100
Score = 31.5 bits (68), Expect = 4.4
Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 1/65 (1%)
Frame = -2
Query: 509 PG-PXPXXXXPXTXPAAXRXPRRPXGSKEGXLAVXRXXAXAPPPPGRXXXGXXXXXXXPP 333
PG P P P P A P P L PPPP G PP
Sbjct: 549 PGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPPPPPPPPPPGTDGPVPPPPPPP 608
Query: 332 PXXPG 318
P PG
Sbjct: 609 PPPPG 613
>AL590383-2|CAH71374.2| 2279|Homo sapiens zinc finger protein 318
protein.
Length = 2279
Score = 31.5 bits (68), Expect = 4.4
Identities = 31/112 (27%), Positives = 35/112 (31%), Gaps = 9/112 (8%)
Frame = -3
Query: 457 GXXGXRXGRRRXXXLXXXXRRXRPPPPDGXXXGXXXRXXXPPPXXRGXKKKRRXXGCPAX 278
G G R GR R PPPP G R P RG +R P
Sbjct: 19 GGGGPRSGRSSGSSSGPARRSSPPPPPSGSSSRTPARRPRSPSGHRG---RRASPSPPRG 75
Query: 277 XFXXXFPXXXR------PRG---XPXXPXXFSNXSXXQXQVDYDFGVRGETP 149
P R PRG P P F S + + DY RG+ P
Sbjct: 76 RRVSPSPPRARRGSPSPPRGRRLFPPGPAGFRGSSRGESRADYARDGRGDHP 127
>AL583834-6|CAI14459.2| 2279|Homo sapiens zinc finger protein 318
protein.
Length = 2279
Score = 31.5 bits (68), Expect = 4.4
Identities = 31/112 (27%), Positives = 35/112 (31%), Gaps = 9/112 (8%)
Frame = -3
Query: 457 GXXGXRXGRRRXXXLXXXXRRXRPPPPDGXXXGXXXRXXXPPPXXRGXKKKRRXXGCPAX 278
G G R GR R PPPP G R P RG +R P
Sbjct: 19 GGGGPRSGRSSGSSSGPARRSSPPPPPSGSSSRTPARRPRSPSGHRG---RRASPSPPRG 75
Query: 277 XFXXXFPXXXR------PRG---XPXXPXXFSNXSXXQXQVDYDFGVRGETP 149
P R PRG P P F S + + DY RG+ P
Sbjct: 76 RRVSPSPPRARRGSPSPPRGRRLFPPGPAGFRGSSRGESRADYARDGRGDHP 127
>AF432213-1|AAL99920.1| 991|Homo sapiens CLL-associated antigen
KW-13 protein.
Length = 991
Score = 31.5 bits (68), Expect = 4.4
Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 1/65 (1%)
Frame = -2
Query: 509 PG-PXPXXXXPXTXPAAXRXPRRPXGSKEGXLAVXRXXAXAPPPPGRXXXGXXXXXXXPP 333
PG P P P P A P P L PPPP G PP
Sbjct: 440 PGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPPPPPPPPPPGTDGPVPPPPPPP 499
Query: 332 PXXPG 318
P PG
Sbjct: 500 PPPPG 504
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 31.1 bits (67), Expect = 5.8
Identities = 22/79 (27%), Positives = 24/79 (30%), Gaps = 1/79 (1%)
Frame = -2
Query: 509 PGPXPXXXXPXTXPAAXRXPRRPXGSKEGXLAVXRXXAXAPPPPGRXXXG-XXXXXXXPP 333
PGP P P P P RP G L + PPPG PP
Sbjct: 307 PGPPPPQQGPPPPPGP--FPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPP 364
Query: 332 PXXPGXEKKKTXGXXPRXP 276
P G + G P P
Sbjct: 365 PTNSGMPTSDSRGPPPTDP 383
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 31.1 bits (67), Expect = 5.8
Identities = 22/79 (27%), Positives = 24/79 (30%), Gaps = 1/79 (1%)
Frame = -2
Query: 509 PGPXPXXXXPXTXPAAXRXPRRPXGSKEGXLAVXRXXAXAPPPPGRXXXG-XXXXXXXPP 333
PGP P P P P RP G L + PPPG PP
Sbjct: 307 PGPPPPQQGPPPPPGP--FPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPP 364
Query: 332 PXXPGXEKKKTXGXXPRXP 276
P G + G P P
Sbjct: 365 PTNSGMPTSDSRGPPPTDP 383
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 31.1 bits (67), Expect = 5.8
Identities = 22/79 (27%), Positives = 24/79 (30%), Gaps = 1/79 (1%)
Frame = -2
Query: 509 PGPXPXXXXPXTXPAAXRXPRRPXGSKEGXLAVXRXXAXAPPPPGRXXXG-XXXXXXXPP 333
PGP P P P P RP G L + PPPG PP
Sbjct: 234 PGPPPPQQGPPPPPGP--FPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPP 291
Query: 332 PXXPGXEKKKTXGXXPRXP 276
P G + G P P
Sbjct: 292 PTNSGMPTSDSRGPPPTDP 310
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 31.1 bits (67), Expect = 5.8
Identities = 22/79 (27%), Positives = 24/79 (30%), Gaps = 1/79 (1%)
Frame = -2
Query: 509 PGPXPXXXXPXTXPAAXRXPRRPXGSKEGXLAVXRXXAXAPPPPGRXXXG-XXXXXXXPP 333
PGP P P P P RP G L + PPPG PP
Sbjct: 344 PGPPPPQQGPPPPPGP--FPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPP 401
Query: 332 PXXPGXEKKKTXGXXPRXP 276
P G + G P P
Sbjct: 402 PTNSGMPTSDSRGPPPTDP 420
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 31.1 bits (67), Expect = 5.8
Identities = 22/79 (27%), Positives = 24/79 (30%), Gaps = 1/79 (1%)
Frame = -2
Query: 509 PGPXPXXXXPXTXPAAXRXPRRPXGSKEGXLAVXRXXAXAPPPPGRXXXG-XXXXXXXPP 333
PGP P P P P RP G L + PPPG PP
Sbjct: 307 PGPPPPQQGPPPPPGP--FPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPP 364
Query: 332 PXXPGXEKKKTXGXXPRXP 276
P G + G P P
Sbjct: 365 PTNSGMPTSDSRGPPPTDP 383
>AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens
cDNA FLJ45135 fis, clone BRAWH3038252, highly similar
to Formin 1 isoform IV. ).
Length = 844
Score = 31.1 bits (67), Expect = 5.8
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = -2
Query: 389 PPPPGRXXXGXXXXXXXPPPXXPGXEKKKTXGXXPRXPXXXXVSXPXPPPG 237
PPPP PPP P G P P ++ P PPPG
Sbjct: 334 PPPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGPPPAPPPPGLA-PPPPPG 383
>X07517-1|CAA30395.2| 236|Homo sapiens salivary proline-rich
protein protein.
Length = 236
Score = 30.7 bits (66), Expect = 7.7
Identities = 26/96 (27%), Positives = 28/96 (29%), Gaps = 7/96 (7%)
Frame = -2
Query: 506 GPXPXXXXPXTXPAAX--RXPRRPXGSKEGXLAVXRXXAXAPPPP-----GRXXXGXXXX 348
GP P P R PR P G +G PPPP G G
Sbjct: 36 GPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRP 95
Query: 347 XXXPPPXXPGXEKKKTXGXXPRXPXXXXVSXPXPPP 240
PPP P + G R P PPP
Sbjct: 96 QGPPPPGKP--QGPPPQGDKSRSPRSPPRKPQGPPP 129
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,879,336
Number of Sequences: 237096
Number of extensions: 1600479
Number of successful extensions: 3370
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2247
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3063
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11881370308
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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